RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 SLC38A10Q9HBR0 1119 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 BTBD7Q9P203 1132 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 NAGPAQ9UK23 515 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 PNMA2Q9UL42 364 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 TRIM17Q9Y577 477 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 SNX14Q9Y5W7 946 aa6.91□□□□□ -1.3
DDB1-210ENST00000538129 ZNFX1Q9P2E3 1918 aaKnown RBP6.91□□□□□ -1.3
DDB1-210ENST00000538129 ANKRD33BA6NCL7 494 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 SH2B2O14492 632 aaPredicted RBP6.9□□□□□ -1.3
DDB1-210ENST00000538129 TNPO2O14787 897 aaKnown RBP6.9□□□□□ -1.3
DDB1-210ENST00000538129 SLC25A27O95847 323 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 PARP1P09874 1014 aaKnown RBP6.9□□□□□ -1.3
DDB1-210ENST00000538129 CALM1P0DP23 149 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 CALM2P0DP24 149 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 CALM3P0DP25 149 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 MAPK1P28482 360 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 CTGFP29279 349 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 COPB2P35606 906 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 ANAPC15P60006 121 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 TROAPQ12815 778 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 TMEM132BQ14DG7 1078 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 CCDC96Q2M329 555 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 ADCK5Q3MIX3 580 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 ASPRV1Q53RT3 343 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 GDF6Q6KF10 455 aaPredicted RBP6.9□□□□□ -1.3
DDB1-210ENST00000538129 BLOC1S2Q6QNY1 142 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 PLEKHH3Q7Z736 793 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 SGMS1Q86VZ5 419 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 RIOX2Q8IUF8 465 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 REPS2Q8NFH8 660 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 GIPC2Q8TF65 315 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 TRIM11Q96F44 468 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 JAKMIP1Q96N16 626 aaKnown RBP6.9□□□□□ -1.3
DDB1-210ENST00000538129 PAGR1Q9BTK6 254 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 MOV10L1Q9BXT6 1211 aaKnown RBP6.9□□□□□ -1.3
DDB1-210ENST00000538129 TEX13BQ9BXU2 312 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 PBX4Q9BYU1 374 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 ARHGAP39Q9C0H5 1083 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 SPATC1LQ9H0A9 340 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 DNAJC25Q9H1X3 360 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 LY9Q9HBG7 655 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 CNTN3Q9P232 1028 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 SRRDQ9UH36 339 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 GJD2Q9UKL4 321 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 PTPN22Q9Y2R2 807 aa6.9□□□□□ -1.3
DDB1-210ENST00000538129 CTDP1Q9Y5B0 961 aaPredicted RBP6.9□□□□□ -1.3
DDB1-210ENST00000538129 BAZ2BQ9UIF8 2168 aaKnown RBP6.9□□□□□ -1.3
DDB1-210ENST00000538129 COL11A1P12107 1806 aaPredicted RBP6.9□□□□□ -1.31
DDB1-210ENST00000538129 CCDC69A6NI79 296 aa6.89□□□□□ -1.31
DDB1-210ENST00000538129 PEX10O60683 326 aa6.89□□□□□ -1.31
DDB1-210ENST00000538129 CPNE3O75131 537 aaKnown RBP6.89□□□□□ -1.31
DDB1-210ENST00000538129 DDAH1O94760 285 aa6.89□□□□□ -1.31
DDB1-210ENST00000538129 GOLGA8HP0CJ92 632 aa6.89□□□□□ -1.31
DDB1-210ENST00000538129 ELNP15502 786 aa6.89□□□□□ -1.31
DDB1-210ENST00000538129 RPS6KB1P23443 525 aa6.89□□□□□ -1.31
DDB1-210ENST00000538129 SMARCA1P28370 1054 aa6.89□□□□□ -1.31
DDB1-210ENST00000538129 CAP1Q01518 475 aa6.89□□□□□ -1.31
DDB1-210ENST00000538129 NRG1Q02297 640 aaPredicted RBP6.89□□□□□ -1.31
DDB1-210ENST00000538129 IKQ13123 557 aaPredicted RBP6.89□□□□□ -1.31
DDB1-210ENST00000538129 PLS1Q14651 629 aa6.89□□□□□ -1.31
DDB1-210ENST00000538129 GRM4Q14833 912 aa6.89□□□□□ -1.31
DDB1-210ENST00000538129 PPP2R5BQ15173 497 aa6.89□□□□□ -1.31
DDB1-210ENST00000538129 TKFCQ3LXA3 575 aa6.89□□□□□ -1.31
DDB1-210ENST00000538129 SYDE2Q5VT97 1194 aa6.89□□□□□ -1.31
DDB1-210ENST00000538129 TTBK2Q6IQ55 1244 aa6.89□□□□□ -1.31
DDB1-210ENST00000538129 FBXO46Q6PJ61 603 aaPredicted RBP6.89□□□□□ -1.31
DDB1-210ENST00000538129 SYNE3Q6ZMZ3 975 aa6.89□□□□□ -1.31
DDB1-210ENST00000538129 NFXL1Q6ZNB6 911 aa6.89□□□□□ -1.31
DDB1-210ENST00000538129 C8orf86Q6ZUL3 223 aa6.89□□□□□ -1.31
DDB1-210ENST00000538129 RUFY3Q7L099 469 aa6.89□□□□□ -1.31
DDB1-210ENST00000538129 DMRTC2Q8IXT2 367 aaPredicted RBP6.89□□□□□ -1.31
DDB1-210ENST00000538129 ABRAQ8N0Z2 381 aa6.89□□□□□ -1.31
DDB1-210ENST00000538129 IL22RA1Q8N6P7 574 aa6.89□□□□□ -1.31
DDB1-210ENST00000538129 CHMP4CQ96CF2 233 aa6.89□□□□□ -1.31
DDB1-210ENST00000538129 IL17RAQ96F46 866 aa6.89□□□□□ -1.31
DDB1-210ENST00000538129 LZTS2Q9BRK4 669 aa6.89□□□□□ -1.31
DDB1-210ENST00000538129 PORCNQ9H237 461 aa6.89□□□□□ -1.31
DDB1-210ENST00000538129 RANBP17Q9H2T7 1088 aaKnown RBP6.89□□□□□ -1.31
DDB1-210ENST00000538129 KANSL3Q9P2N6 904 aa6.89□□□□□ -1.31
DDB1-210ENST00000538129 SALL4Q9UJQ4 1053 aa6.89□□□□□ -1.31
DDB1-210ENST00000538129 ZNF214Q9UL59 606 aaPredicted RBP6.89□□□□□ -1.31
DDB1-210ENST00000538129 ISY1Q9ULR0 285 aaKnown RBP6.89□□□□□ -1.31
DDB1-210ENST00000538129 PPME1Q9Y570 386 aa6.89□□□□□ -1.31
DDB1-210ENST00000538129 SLC12A7Q9Y666 1083 aa6.89□□□□□ -1.31
DDB1-210ENST00000538129 CYP46A1Q9Y6A2 500 aa6.89□□□□□ -1.31
DDB1-210ENST00000538129 SMCHD1A6NHR9 2005 aa6.89□□□□□ -1.31
DDB1-210ENST00000538129 ZNF536O15090 1300 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 FRMPD2Q68DX3 1309 aaPredicted RBP6.88□□□□□ -1.31
DDB1-210ENST00000538129 A6NHS1 94 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 SLC15A5A6NIM6 579 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 C9orf172C9J069 976 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 KLRF2D3W0D1 207 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 ICAM1P05362 532 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 FCER1AP12319 257 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 XRCC5P13010 732 aaKnown RBP6.88□□□□□ -1.31
DDB1-210ENST00000538129 CASTP20810 708 aaKnown RBP6.88□□□□□ -1.31
DDB1-210ENST00000538129 VAMP1P23763 118 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 CDC27P30260 824 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 KIF5BP33176 963 aa6.88□□□□□ -1.31
DDB1-210ENST00000538129 SLC16A2P36021 539 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms