RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.51□□□□□ -0.89
SPARC-208ENST00000538026 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.51□□□□□ -0.89
SPARC-208ENST00000538026 POTEB3A0JP26 581 aa9.51□□□□□ -0.89
SPARC-208ENST00000538026 TMEM150BA6NC51 233 aa9.51□□□□□ -0.89
SPARC-208ENST00000538026 RSPH10B2B2RC85 870 aa9.51□□□□□ -0.89
SPARC-208ENST00000538026 KIF28PB7ZC32 967 aa9.51□□□□□ -0.89
SPARC-208ENST00000538026 CTSHP09668 335 aa9.51□□□□□ -0.89
SPARC-208ENST00000538026 RSPH10BP0C881 870 aa9.51□□□□□ -0.89
SPARC-208ENST00000538026 KRT2P35908 639 aa9.51□□□□□ -0.89
SPARC-208ENST00000538026 IGBP1P78318 339 aa9.51□□□□□ -0.89
SPARC-208ENST00000538026 DEFB103AP81534 67 aa9.51□□□□□ -0.89
SPARC-208ENST00000538026 SPIRE1Q08AE8 756 aa9.51□□□□□ -0.89
SPARC-208ENST00000538026 PLEKHG4Q58EX7 1191 aa9.51□□□□□ -0.89
SPARC-208ENST00000538026 POTEBQ6S5H4 581 aa9.51□□□□□ -0.89
SPARC-208ENST00000538026 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.51□□□□□ -0.892e-6■■■■□ 20.6
SPARC-208ENST00000538026 NEK8Q86SG6 692 aa9.51□□□□□ -0.89
SPARC-208ENST00000538026 POTEDQ86YR6 584 aa9.51□□□□□ -0.89
SPARC-208ENST00000538026 DIS3L2Q8IYB7 885 aaKnown RBP9.51□□□□□ -0.89
SPARC-208ENST00000538026 KIAA0319LQ8IZA0 1049 aa9.51□□□□□ -0.89
SPARC-208ENST00000538026 DBF4BQ8NFT6 615 aa9.51□□□□□ -0.89
SPARC-208ENST00000538026 FBXO18Q8NFZ0 1043 aa9.51□□□□□ -0.89
SPARC-208ENST00000538026 DNAJB3Q8WWF6 145 aa9.51□□□□□ -0.89
SPARC-208ENST00000538026 ZSCAN31Q96LW9 406 aaPredicted RBP9.51□□□□□ -0.89
SPARC-208ENST00000538026 FAM161BQ96MY7 647 aa9.51□□□□□ -0.89
SPARC-208ENST00000538026 TMEM60Q9H2L4 133 aa9.51□□□□□ -0.89
SPARC-208ENST00000538026 AGO3Q9H9G7 860 aaKnown RBP9.51□□□□□ -0.89
SPARC-208ENST00000538026 CDHR5Q9HBB8 845 aa9.51□□□□□ -0.89
SPARC-208ENST00000538026 ZNF302Q9NR11 478 aa9.51□□□□□ -0.89
SPARC-208ENST00000538026 SH2B1Q9NRF2 756 aaPredicted RBP9.51□□□□□ -0.89
SPARC-208ENST00000538026 DISC1Q9NRI5 854 aa9.51□□□□□ -0.89
SPARC-208ENST00000538026 WRAP73Q9P2S5 460 aaPredicted RBP9.51□□□□□ -0.89
SPARC-208ENST00000538026 GABBR1Q9UBS5 961 aa9.51□□□□□ -0.89
SPARC-208ENST00000538026 DDX25Q9UHL0 483 aaKnown RBP9.51□□□□□ -0.89
SPARC-208ENST00000538026 TUBE1Q9UJT0 475 aa9.51□□□□□ -0.89
SPARC-208ENST00000538026 PCDHA10Q9Y5I2 948 aa9.51□□□□□ -0.89
SPARC-208ENST00000538026 IGSF9BQ9UPX0 1349 aa9.51□□□□□ -0.89
SPARC-208ENST00000538026 TTC28Q96AY4 2481 aa9.5□□□□□ -0.89
SPARC-208ENST00000538026 CCDC194A0A1B0GVG4 234 aa9.5□□□□□ -0.89
SPARC-208ENST00000538026 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.5□□□□□ -0.89
SPARC-208ENST00000538026 CHMP2AO43633 222 aa9.5□□□□□ -0.89
SPARC-208ENST00000538026 PFKMP08237 780 aa9.5□□□□□ -0.89
SPARC-208ENST00000538026 DNAJB2P25686 324 aa9.5□□□□□ -0.89
SPARC-208ENST00000538026 KLRC1P26715 233 aa9.5□□□□□ -0.89
SPARC-208ENST00000538026 TOB1P50616 345 aaPredicted RBP9.5□□□□□ -0.89
SPARC-208ENST00000538026 WDR5P61964 334 aaKnown RBP9.5□□□□□ -0.89
SPARC-208ENST00000538026 KRT76Q01546 638 aa9.5□□□□□ -0.89
SPARC-208ENST00000538026 LPIN1Q14693 890 aa9.5□□□□□ -0.89
SPARC-208ENST00000538026 TARBP2Q15633 366 aaKnown RBP9.5□□□□□ -0.89
SPARC-208ENST00000538026 LRCH2Q5VUJ6 765 aa9.5□□□□□ -0.89
SPARC-208ENST00000538026 MIS18BP1Q6P0N0 1132 aa9.5□□□□□ -0.89
SPARC-208ENST00000538026 PDXDC2PQ6P474 469 aa9.5□□□□□ -0.89
SPARC-208ENST00000538026 MTHFD1LQ6UB35 978 aa9.5□□□□□ -0.89
SPARC-208ENST00000538026 RTN4RL1Q86UN2 441 aaPredicted RBP9.5□□□□□ -0.89
SPARC-208ENST00000538026 SMAP1Q8IYB5 467 aaPredicted RBP9.5□□□□□ -0.89
SPARC-208ENST00000538026 LINC01465Q8N7H1 131 aa9.5□□□□□ -0.89
SPARC-208ENST00000538026 ZNF579Q8NAF0 562 aaKnown RBP9.5□□□□□ -0.89
SPARC-208ENST00000538026 WASF1Q92558 559 aa9.5□□□□□ -0.89
SPARC-208ENST00000538026 MTMR9Q96QG7 549 aa9.5□□□□□ -0.89
SPARC-208ENST00000538026 FTOQ9C0B1 505 aaKnown RBP eCLIP9.5□□□□□ -0.89
SPARC-208ENST00000538026 AZI2Q9H6S1 392 aa9.5□□□□□ -0.89
SPARC-208ENST00000538026 PCDHA2Q9Y5H9 948 aa9.5□□□□□ -0.89
SPARC-208ENST00000538026 SLC4A7Q9Y6M7 1214 aa9.5□□□□□ -0.89
SPARC-208ENST00000538026 LCHNA4D1U4 455 aa9.49□□□□□ -0.89
SPARC-208ENST00000538026 RRN3P2A6NIE6 340 aa9.49□□□□□ -0.89
SPARC-208ENST00000538026 WDR64B1ANS9 1081 aa9.49□□□□□ -0.89
SPARC-208ENST00000538026 BACH1O14867 736 aa9.49□□□□□ -0.89
SPARC-208ENST00000538026 ZBTB39O15060 712 aa9.49□□□□□ -0.89
SPARC-208ENST00000538026 HBP1O60381 514 aa9.49□□□□□ -0.89
SPARC-208ENST00000538026 CCNT1O60563 726 aaKnown RBP9.49□□□□□ -0.89
SPARC-208ENST00000538026 GAS7O60861 476 aa9.49□□□□□ -0.89
SPARC-208ENST00000538026 C22orf31O95567 290 aa9.49□□□□□ -0.89
SPARC-208ENST00000538026 GNAT1P11488 350 aa9.49□□□□□ -0.89
SPARC-208ENST00000538026 SLC26A2P50443 739 aa9.49□□□□□ -0.89
SPARC-208ENST00000538026 TMEM62Q0P6H9 643 aa9.49□□□□□ -0.89
SPARC-208ENST00000538026 PPP2R5CQ13362 524 aa9.49□□□□□ -0.89
SPARC-208ENST00000538026 DRP2Q13474 957 aa9.49□□□□□ -0.89
SPARC-208ENST00000538026 GRIN2CQ14957 1233 aa9.49□□□□□ -0.89
SPARC-208ENST00000538026 FBXO47Q5MNV8 452 aa9.49□□□□□ -0.89
SPARC-208ENST00000538026 CNKSR3Q6P9H4 555 aa9.49□□□□□ -0.89
SPARC-208ENST00000538026 TRMT1LQ7Z2T5 733 aaKnown RBP9.49□□□□□ -0.89
SPARC-208ENST00000538026 CCDC155Q8N6L0 562 aa9.49□□□□□ -0.89
SPARC-208ENST00000538026 C4orf32Q8N8J7 132 aa9.49□□□□□ -0.89
SPARC-208ENST00000538026 LINC01599Q8WXQ3 324 aa9.49□□□□□ -0.89
SPARC-208ENST00000538026 CDX2Q99626 313 aaPredicted RBP9.49□□□□□ -0.89
SPARC-208ENST00000538026 SH2D3AQ9BRG2 576 aa9.49□□□□□ -0.89
SPARC-208ENST00000538026 TEKT3Q9BXF9 490 aa9.49□□□□□ -0.89
SPARC-208ENST00000538026 FAM49AQ9H0Q0 323 aaPredicted RBP9.49□□□□□ -0.89
SPARC-208ENST00000538026 TRPC6Q9Y210 931 aa9.49□□□□□ -0.89
SPARC-208ENST00000538026 CDY2AQ9Y6F7 541 aa9.49□□□□□ -0.89
SPARC-208ENST00000538026 NCOR1O75376 2440 aa9.48□□□□□ -0.89
SPARC-208ENST00000538026 COL4A6Q14031 1691 aa9.48□□□□□ -0.89
SPARC-208ENST00000538026 SMIM35A0A1B0GVV1 85 aa9.48□□□□□ -0.89
SPARC-208ENST00000538026 EPOPA6NHQ4 379 aa9.48□□□□□ -0.89
SPARC-208ENST00000538026 ZBBXA8MT70 800 aa9.48□□□□□ -0.89
SPARC-208ENST00000538026 CAND2O75155 1236 aa9.48□□□□□ -0.89
SPARC-208ENST00000538026 PSAPP07602 524 aa9.48□□□□□ -0.89
SPARC-208ENST00000538026 GHRP10912 638 aa9.48□□□□□ -0.89
SPARC-208ENST00000538026 ATP2A2P16615 1042 aaKnown RBP9.48□□□□□ -0.89
SPARC-208ENST00000538026 XBP1P17861 261 aa9.48□□□□□ -0.89
SPARC-208ENST00000538026 PRKCEQ02156 737 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms