RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 FBXL5Q9UKA1 691 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 WDR81Q562E7 1941 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 PAPPA2Q9BXP8 1791 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 TGFB1I1O43294 461 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 CTNND1O60716 968 aaKnown RBP10.25□□□□□ -0.77
UBE3B-207ENST00000537063 TBC1D8O95759 1140 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 TFRCP02786 760 aaKnown RBP10.25□□□□□ -0.77
UBE3B-207ENST00000537063 SERPING1P05155 500 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 ITGB5P18084 799 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 GUCY2CP25092 1073 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 KIF5AQ12840 1032 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 TMEM174Q8WUU8 243 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 UBE2Q2Q8WVN8 375 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 AGBL1Q96MI9 1066 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 TEKT3Q9BXF9 490 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 TANGO6Q9C0B7 1094 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 CCPG1Q9ULG6 757 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 UBIAD1Q9Y5Z9 338 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 ATP8B3O60423 1300 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 WDR90Q96KV7 1748 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 CTAGE15A4D2H0 777 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 DHX15O43143 795 aaKnown RBP10.25□□□□□ -0.77
UBE3B-207ENST00000537063 NR3C1P04150 777 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 CTAGE8P0CG41 777 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 KCNH2Q12809 1159 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 PCNX4Q63HM2 1172 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 CTAGE6Q86UF2 777 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 CTAGE4Q8IX94 777 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 TRIM58Q8NG06 486 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 SECISBP2LQ93073 1101 aaKnown RBP10.25□□□□□ -0.77
UBE3B-207ENST00000537063 NACC1Q96RE7 527 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 METTL14Q9HCE5 456 aaKnown RBP10.25□□□□□ -0.77
UBE3B-207ENST00000537063 PUF60Q9UHX1 559 aaKnown RBP10.25□□□□□ -0.77
UBE3B-207ENST00000537063 DUSP10Q9Y6W6 482 aa10.25□□□□□ -0.77
UBE3B-207ENST00000537063 GTPBP10A4D1E9 387 aaKnown RBP10.24□□□□□ -0.77
UBE3B-207ENST00000537063 IPO5O00410 1097 aaKnown RBP10.24□□□□□ -0.77
UBE3B-207ENST00000537063 PPP1R37O75864 691 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 PRPF6O94906 941 aaKnown RBP10.24□□□□□ -0.77
UBE3B-207ENST00000537063 EGFRP00533 1210 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 SFMBT2Q5VUG0 894 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 MCF2L2Q86YR7 1114 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 BCAS3Q9H6U6 928 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 ARMCX3Q9UH62 379 aaPredicted RBP10.24□□□□□ -0.77
UBE3B-207ENST00000537063 SAR1BQ9Y6B6 198 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 ARID2Q68CP9 1835 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 NFIBO00712 420 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 AKAP3O75969 853 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 AFPP02771 609 aaKnown RBP10.24□□□□□ -0.77
UBE3B-207ENST00000537063 PRLRP16471 622 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 SF3B2Q13435 895 aaKnown RBP10.24□□□□□ -0.77
UBE3B-207ENST00000537063 SLC30A10Q6XR72 485 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 CACNA2D4Q7Z3S7 1137 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 PIGOQ8TEQ8 1089 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 RPGRIP1Q96KN7 1286 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 PNMA2Q9UL42 364 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 USO1O60763 962 aaKnown RBP10.24□□□□□ -0.77
UBE3B-207ENST00000537063 LYPLA2O95372 231 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 TUBBP07437 444 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 RPL13P26373 211 aaKnown RBP10.24□□□□□ -0.77
UBE3B-207ENST00000537063 UBXN2AP68543 259 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 MAPK7Q13164 816 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 TPH2Q8IWU9 490 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 TXLNBQ8N3L3 684 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 MSL3Q8N5Y2 521 aaKnown RBP10.24□□□□□ -0.77
UBE3B-207ENST00000537063 JDP2Q8WYK2 163 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 SLC35C1Q96A29 364 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 HOOK2Q96ED9 719 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 PNKPQ96T60 521 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 MKNK1Q9BUB5 465 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 ZHX3Q9H4I2 956 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 PARVGQ9HBI0 331 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 DMAC2Q9NW81 257 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 HDAC6Q9UBN7 1215 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 ZNF112Q9UJU3 913 aa10.24□□□□□ -0.77
UBE3B-207ENST00000537063 ERCC3P19447 782 aa10.23□□□□□ -0.77
UBE3B-207ENST00000537063 PLA2G4AP47712 749 aa10.23□□□□□ -0.77
UBE3B-207ENST00000537063 POLR2FP61218 127 aaKnown RBP10.23□□□□□ -0.77
UBE3B-207ENST00000537063 GABPB1Q06547 395 aaPredicted RBP10.23□□□□□ -0.77
UBE3B-207ENST00000537063 SLC9C1Q4G0N8 1177 aa10.23□□□□□ -0.77
UBE3B-207ENST00000537063 WDR93Q6P2C0 686 aa10.23□□□□□ -0.77
UBE3B-207ENST00000537063 IL31RAQ8NI17 732 aa10.23□□□□□ -0.77
UBE3B-207ENST00000537063 LXNQ9BS40 222 aa10.23□□□□□ -0.77
UBE3B-207ENST00000537063 SIX2Q9NPC8 291 aa10.23□□□□□ -0.77
UBE3B-207ENST00000537063 PPP1R9AQ9ULJ8 1098 aa10.23□□□□□ -0.77
UBE3B-207ENST00000537063 NENFQ9UMX5 172 aa10.23□□□□□ -0.77
UBE3B-207ENST00000537063 JRKLQ9Y4A0 524 aa10.23□□□□□ -0.77
UBE3B-207ENST00000537063 CAPN6Q9Y6Q1 641 aa10.23□□□□□ -0.77
UBE3B-207ENST00000537063 LCTP09848 1927 aa10.23□□□□□ -0.77
UBE3B-207ENST00000537063 DICER1Q9UPY3 1922 aaKnown RBP10.23□□□□□ -0.77
UBE3B-207ENST00000537063 ENC1O14682 589 aa10.23□□□□□ -0.77
UBE3B-207ENST00000537063 SASH3O75995 380 aa10.23□□□□□ -0.77
UBE3B-207ENST00000537063 SEC31AO94979 1220 aaKnown RBP10.23□□□□□ -0.77
UBE3B-207ENST00000537063 FAM13AO94988 1023 aa10.23□□□□□ -0.77
UBE3B-207ENST00000537063 GCNT3O95395 438 aa10.23□□□□□ -0.77
UBE3B-207ENST00000537063 ITIH3Q06033 890 aa10.23□□□□□ -0.77
UBE3B-207ENST00000537063 KCNA1Q09470 495 aa10.23□□□□□ -0.77
UBE3B-207ENST00000537063 ZNF720Q7Z2F6 126 aa10.23□□□□□ -0.77
UBE3B-207ENST00000537063 RNF10Q8N5U6 811 aaKnown RBP10.23□□□□□ -0.77
UBE3B-207ENST00000537063 SYTL5Q8TDW5 730 aaPredicted RBP10.23□□□□□ -0.77
UBE3B-207ENST00000537063 FUT8Q9BYC5 575 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms