RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 CROCC2H7BZ55 1655 aa7.89□□□□□ -1.15
CLIP1-207ENST00000536634 ZFYVE9O95405 1425 aa7.89□□□□□ -1.15
CLIP1-207ENST00000536634 NOS1P29475 1434 aa7.89□□□□□ -1.15
CLIP1-207ENST00000536634 ERBINQ96RT1 1412 aa7.89□□□□□ -1.15
CLIP1-207ENST00000536634 FFAR3O14843 346 aa7.89□□□□□ -1.15
CLIP1-207ENST00000536634 NKRFO15226 690 aaKnown RBP eCLIP7.89□□□□□ -1.15
CLIP1-207ENST00000536634 VWA3BQ502W6 1294 aa7.89□□□□□ -1.15
CLIP1-207ENST00000536634 ZC3H12BQ5HYM0 836 aaKnown RBP7.89□□□□□ -1.15
CLIP1-207ENST00000536634 HABP4Q5JVS0 413 aaKnown RBP7.89□□□□□ -1.15
CLIP1-207ENST00000536634 CD300LDQ6UXZ3 194 aa7.89□□□□□ -1.15
CLIP1-207ENST00000536634 MTDHQ86UE4 582 aaKnown RBP7.89□□□□□ -1.15
CLIP1-207ENST00000536634 SIAH1Q8IUQ4 282 aa7.89□□□□□ -1.15
CLIP1-207ENST00000536634 TMEM151BQ8IW70 566 aa7.89□□□□□ -1.15
CLIP1-207ENST00000536634 RBM12BQ8IXT5 1001 aaKnown RBP7.89□□□□□ -1.15
CLIP1-207ENST00000536634 GORASP1Q9BQQ3 440 aa7.89□□□□□ -1.15
CLIP1-207ENST00000536634 SLC52A2Q9HAB3 445 aa7.89□□□□□ -1.15
CLIP1-207ENST00000536634 NDOR1Q9UHB4 597 aa7.89□□□□□ -1.15
CLIP1-207ENST00000536634 LMTK2Q8IWU2 1503 aa7.88□□□□□ -1.15
CLIP1-207ENST00000536634 FAM47E-STBD1D6RA91 191 aa7.88□□□□□ -1.15
CLIP1-207ENST00000536634 SLC27A2O14975 620 aa7.88□□□□□ -1.15
CLIP1-207ENST00000536634 CYP2C8P10632 490 aa7.88□□□□□ -1.15
CLIP1-207ENST00000536634 GNAT1P11488 350 aa7.88□□□□□ -1.15
CLIP1-207ENST00000536634 GUCY1A3Q02108 690 aa7.88□□□□□ -1.15
CLIP1-207ENST00000536634 DLX2Q07687 328 aaPredicted RBP7.88□□□□□ -1.15
CLIP1-207ENST00000536634 SQSTM1Q13501 440 aa7.88□□□□□ -1.15
CLIP1-207ENST00000536634 CR1LQ2VPA4 569 aa7.88□□□□□ -1.15
CLIP1-207ENST00000536634 ADGRG2Q8IZP9 1017 aa7.88□□□□□ -1.15
CLIP1-207ENST00000536634 TP53I13Q8NBR0 393 aaPredicted RBP7.88□□□□□ -1.15
CLIP1-207ENST00000536634 SMOC1Q9H4F8 434 aa7.88□□□□□ -1.15
CLIP1-207ENST00000536634 ASH2LQ9UBL3 628 aa7.88□□□□□ -1.15
CLIP1-207ENST00000536634 PCDHA9Q9Y5H5 950 aa7.88□□□□□ -1.15
CLIP1-207ENST00000536634 PLEKHG1Q9ULL1 1385 aa7.87□□□□□ -1.15
CLIP1-207ENST00000536634 GCC2Q8IWJ2 1684 aa7.87□□□□□ -1.15
CLIP1-207ENST00000536634 A0A1B0GTL3 188 aa7.87□□□□□ -1.15
CLIP1-207ENST00000536634 ARVCFO00192 962 aa7.87□□□□□ -1.15
CLIP1-207ENST00000536634 KRIT1O00522 736 aa7.87□□□□□ -1.15
CLIP1-207ENST00000536634 TRIM13O60858 407 aa7.87□□□□□ -1.15
CLIP1-207ENST00000536634 CRTAMO95727 393 aa7.87□□□□□ -1.15
CLIP1-207ENST00000536634 LTFP02788 710 aa7.87□□□□□ -1.15
CLIP1-207ENST00000536634 PAK1Q13153 545 aa7.87□□□□□ -1.15
CLIP1-207ENST00000536634 BRINP3Q76B58 766 aa7.87□□□□□ -1.15
CLIP1-207ENST00000536634 NLGN1Q8N2Q7 840 aa7.87□□□□□ -1.15
CLIP1-207ENST00000536634 PCDH19Q8TAB3 1148 aa7.87□□□□□ -1.15
CLIP1-207ENST00000536634 UHMK1Q8TAS1 419 aaKnown RBP7.87□□□□□ -1.15
CLIP1-207ENST00000536634 SLC7A14Q8TBB6 771 aa7.87□□□□□ -1.15
CLIP1-207ENST00000536634 PHOSPHO1Q8TCT1 267 aa7.87□□□□□ -1.15
CLIP1-207ENST00000536634 DTLQ9NZJ0 730 aa7.87□□□□□ -1.15
CLIP1-207ENST00000536634 TELO2Q9Y4R8 837 aa7.87□□□□□ -1.15
CLIP1-207ENST00000536634 NHSL1Q5SYE7 1610 aa7.87□□□□□ -1.15
CLIP1-207ENST00000536634 UTRNP46939 3433 aa7.87□□□□□ -1.15
CLIP1-207ENST00000536634 ASXL1Q8IXJ9 1541 aa7.87□□□□□ -1.15
CLIP1-207ENST00000536634 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.86□□□□□ -1.15
CLIP1-207ENST00000536634 SPIRE1Q08AE8 756 aa7.86□□□□□ -1.15
CLIP1-207ENST00000536634 SMAD4Q13485 552 aaKnown RBP7.86□□□□□ -1.15
CLIP1-207ENST00000536634 CYP4F22Q6NT55 531 aa7.86□□□□□ -1.15
CLIP1-207ENST00000536634 SAPCD2Q86UD0 394 aa7.86□□□□□ -1.15
CLIP1-207ENST00000536634 STK32CQ86UX6 486 aa7.86□□□□□ -1.15
CLIP1-207ENST00000536634 GSTCDQ8NEC7 633 aa7.86□□□□□ -1.15
CLIP1-207ENST00000536634 SH3TC2Q8TF17 1288 aa7.86□□□□□ -1.15
CLIP1-207ENST00000536634 ZNF526Q8TF50 670 aaPredicted RBP7.86□□□□□ -1.15
CLIP1-207ENST00000536634 CLEC4DQ8WXI8 215 aa7.86□□□□□ -1.15
CLIP1-207ENST00000536634 YIPF4Q9BSR8 244 aa7.86□□□□□ -1.15
CLIP1-207ENST00000536634 RRP7BPQ9NSQ0 103 aa7.86□□□□□ -1.15
CLIP1-207ENST00000536634 ABCC5O15440 1437 aa7.86□□□□□ -1.15
CLIP1-207ENST00000536634 MYOM3Q5VTT5 1437 aa7.86□□□□□ -1.15
CLIP1-207ENST00000536634 ADAMTS13Q76LX8 1427 aa7.86□□□□□ -1.15
CLIP1-207ENST00000536634 SETD5Q9C0A6 1442 aa7.86□□□□□ -1.15
CLIP1-207ENST00000536634 RIMS2Q9UQ26 1411 aa7.86□□□□□ -1.15
CLIP1-207ENST00000536634 NCOA3Q9Y6Q9 1424 aa7.86□□□□□ -1.15
CLIP1-207ENST00000536634 TMEM131LA2VDJ0 1609 aa7.85□□□□□ -1.15
CLIP1-207ENST00000536634 TCRBV5S4A2TA0A5A2 114 aa7.85□□□□□ -1.15
CLIP1-207ENST00000536634 RASGRP1O95267 797 aa7.85□□□□□ -1.15
CLIP1-207ENST00000536634 LRG1P02750 347 aa7.85□□□□□ -1.15
CLIP1-207ENST00000536634 SRGAP2CP0DJJ0 459 aa7.85□□□□□ -1.15
CLIP1-207ENST00000536634 RBM6P78332 1123 aaKnown RBP7.85□□□□□ -1.15
CLIP1-207ENST00000536634 CAP1Q01518 475 aa7.85□□□□□ -1.15
CLIP1-207ENST00000536634 GRIN1Q05586 938 aa7.85□□□□□ -1.15
CLIP1-207ENST00000536634 TRIM61Q5EBN2 209 aa7.85□□□□□ -1.15
CLIP1-207ENST00000536634 ZC3H18Q86VM9 953 aaKnown RBP7.85□□□□□ -1.15
CLIP1-207ENST00000536634 LINC00482Q8N8I6 264 aa7.85□□□□□ -1.15
CLIP1-207ENST00000536634 LINC01356Q8N9X3 169 aa7.85□□□□□ -1.15
CLIP1-207ENST00000536634 SH3RF2Q8TEC5 729 aa7.85□□□□□ -1.15
CLIP1-207ENST00000536634 ZBTB8AQ96BR9 441 aa7.85□□□□□ -1.15
CLIP1-207ENST00000536634 TOE1Q96GM8 510 aaKnown RBP7.85□□□□□ -1.15
CLIP1-207ENST00000536634 SCLYQ96I15 445 aa7.85□□□□□ -1.15
CLIP1-207ENST00000536634 SPATA6Q9NWH7 488 aaPredicted RBP7.85□□□□□ -1.15
CLIP1-207ENST00000536634 SFMBT1Q9UHJ3 866 aa7.85□□□□□ -1.15
CLIP1-207ENST00000536634 WNT9AO14904 365 aa7.84□□□□□ -1.15
CLIP1-207ENST00000536634 MAFKO60675 156 aa7.84□□□□□ -1.15
CLIP1-207ENST00000536634 PYGMP11217 842 aa7.84□□□□□ -1.15
CLIP1-207ENST00000536634 BMP7P18075 431 aa7.84□□□□□ -1.15
CLIP1-207ENST00000536634 ATF3P18847 181 aa7.84□□□□□ -1.15
CLIP1-207ENST00000536634 ITGA1P56199 1179 aa7.84□□□□□ -1.15
CLIP1-207ENST00000536634 TUSC3Q13454 348 aa7.84□□□□□ -1.15
CLIP1-207ENST00000536634 TEPPQ6URK8 271 aa7.84□□□□□ -1.15
CLIP1-207ENST00000536634 BRAPQ7Z569 592 aa7.84□□□□□ -1.15
CLIP1-207ENST00000536634 C11orf84Q9BUA3 381 aaPredicted RBP7.84□□□□□ -1.15
CLIP1-207ENST00000536634 CD244Q9BZW8 370 aa7.84□□□□□ -1.15
CLIP1-207ENST00000536634 NCOA5Q9HCD5 579 aaKnown RBP7.84□□□□□ -1.15
CLIP1-207ENST00000536634 RBPJLQ9UBG7 517 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms