RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 PRPF6O94906 941 aaKnown RBP25.06■■□□□ 1.6
HMGA2-206ENST00000536545 ZBED6P86452 979 aa25.06■■□□□ 1.6
HMGA2-206ENST00000536545 TREML2Q5T2D2 321 aa25.06■■□□□ 1.6
HMGA2-206ENST00000536545 TRIM59Q8IWR1 403 aa25.06■■□□□ 1.6
HMGA2-206ENST00000536545 GPRASP2Q96D09 838 aa25.06■■□□□ 1.6
HMGA2-206ENST00000536545 FIZ1Q96SL8 496 aa25.06■■□□□ 1.6
HMGA2-206ENST00000536545 POLD4Q9HCU8 107 aa25.06■■□□□ 1.6
HMGA2-206ENST00000536545 AGPAT5Q9NUQ2 364 aa25.06■■□□□ 1.6
HMGA2-206ENST00000536545 ZMYM2Q9UBW7 1377 aa25.06■■□□□ 1.6
HMGA2-206ENST00000536545 CTIFO43310 598 aaKnown RBP25.05■■□□□ 1.6
HMGA2-206ENST00000536545 ATP9AO75110 1047 aa25.05■■□□□ 1.6
HMGA2-206ENST00000536545 GCNT3O95395 438 aa25.05■■□□□ 1.6
HMGA2-206ENST00000536545 NR3C2P08235 984 aa25.05■■□□□ 1.6
HMGA2-206ENST00000536545 WDR59Q6PJI9 974 aa25.05■■□□□ 1.6
HMGA2-206ENST00000536545 NSUN6Q8TEA1 469 aaKnown RBP25.05■■□□□ 1.6
HMGA2-206ENST00000536545 INPP4AQ96PE3 977 aaPredicted RBP25.05■■□□□ 1.6
HMGA2-206ENST00000536545 TYW1Q9NV66 732 aaKnown RBP25.05■■□□□ 1.6
HMGA2-206ENST00000536545 DBR1Q9UK59 544 aaKnown RBP25.05■■□□□ 1.6
HMGA2-206ENST00000536545 UBE4BO95155 1302 aa25.05■■□□□ 1.6
HMGA2-206ENST00000536545 TESPA1A2RU30 521 aaPredicted RBP25.05■■□□□ 1.6
HMGA2-206ENST00000536545 FANCGO15287 622 aa25.05■■□□□ 1.6
HMGA2-206ENST00000536545 NR2F2P24468 414 aa25.05■■□□□ 1.6
HMGA2-206ENST00000536545 IREB2P48200 963 aaKnown RBP25.05■■□□□ 1.6
HMGA2-206ENST00000536545 JAK3P52333 1124 aa25.05■■□□□ 1.6
HMGA2-206ENST00000536545 MAPK7Q13164 816 aa25.05■■□□□ 1.6
HMGA2-206ENST00000536545 PCMTD1Q96MG8 357 aaPredicted RBP25.05■■□□□ 1.6
HMGA2-206ENST00000536545 SFI1A8K8P3 1242 aa25.04■■□□□ 1.6
HMGA2-206ENST00000536545 CETN3O15182 167 aa25.04■■□□□ 1.6
HMGA2-206ENST00000536545 CALUO43852 315 aaPredicted RBP25.04■■□□□ 1.6
HMGA2-206ENST00000536545 CCNE2O96020 404 aa25.04■■□□□ 1.6
HMGA2-206ENST00000536545 QARSP47897 775 aaKnown RBP25.04■■□□□ 1.6
HMGA2-206ENST00000536545 KRT76Q01546 638 aa25.04■■□□□ 1.6
HMGA2-206ENST00000536545 ADAM9Q13443 819 aa25.04■■□□□ 1.6
HMGA2-206ENST00000536545 MYCT1Q8N699 235 aa25.04■■□□□ 1.6
HMGA2-206ENST00000536545 USP50Q70EL3 339 aaPredicted RBP25.03■■□□□ 1.6
HMGA2-206ENST00000536545 ACRBPQ8NEB7 543 aa25.03■■□□□ 1.6
HMGA2-206ENST00000536545 CDCA5Q96FF9 252 aa25.03■■□□□ 1.6
HMGA2-206ENST00000536545 CHP1Q99653 195 aa25.03■■□□□ 1.6
HMGA2-206ENST00000536545 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.03■■□□□ 1.6
HMGA2-206ENST00000536545 DNAI1Q9UI46 699 aa25.03■■□□□ 1.6
HMGA2-206ENST00000536545 SAMM50Q9Y512 469 aa25.03■■□□□ 1.6
HMGA2-206ENST00000536545 WDR64B1ANS9 1081 aa25.03■■□□□ 1.6
HMGA2-206ENST00000536545 EPHB6O15197 1021 aa25.03■■□□□ 1.6
HMGA2-206ENST00000536545 ERCC3P19447 782 aa25.03■■□□□ 1.6
HMGA2-206ENST00000536545 NMT1P30419 496 aaKnown RBP25.03■■□□□ 1.6
HMGA2-206ENST00000536545 SFNP31947 248 aa25.03■■□□□ 1.6
HMGA2-206ENST00000536545 PLS1Q14651 629 aa25.03■■□□□ 1.6
HMGA2-206ENST00000536545 UGCGQ16739 394 aa25.03■■□□□ 1.6
HMGA2-206ENST00000536545 PADI6Q6TGC4 694 aa25.03■■□□□ 1.6
HMGA2-206ENST00000536545 LBX2Q6XYB7 198 aa25.03■■□□□ 1.6
HMGA2-206ENST00000536545 NLRX1Q86UT6 975 aa25.03■■□□□ 1.6
HMGA2-206ENST00000536545 DAW1Q8N136 415 aa25.03■■□□□ 1.6
HMGA2-206ENST00000536545 L2HGDHQ9H9P8 463 aa25.03■■□□□ 1.6
HMGA2-206ENST00000536545 A0A0G2JLL6 359 aaPredicted RBP25.02■■□□□ 1.6
HMGA2-206ENST00000536545 KCNA1Q09470 495 aa25.02■■□□□ 1.6
HMGA2-206ENST00000536545 PRRT2Q7Z6L0 340 aaPredicted RBP25.02■■□□□ 1.6
HMGA2-206ENST00000536545 CHST13Q8NET6 341 aa25.02■■□□□ 1.6
HMGA2-206ENST00000536545 RDM1Q8NG50 284 aa25.02■■□□□ 1.6
HMGA2-206ENST00000536545 SENP7Q9BQF6 1050 aa25.02■■□□□ 1.6
HMGA2-206ENST00000536545 ELP3Q9H9T3 547 aa25.02■■□□□ 1.6
HMGA2-206ENST00000536545 FAM184BQ9ULE4 1060 aa25.02■■□□□ 1.6
HMGA2-206ENST00000536545 MAFGO15525 162 aa25.01■■□□□ 1.59
HMGA2-206ENST00000536545 HIP1RO75146 1068 aa25.01■■□□□ 1.59
HMGA2-206ENST00000536545 RGS20O76081 388 aa25.01■■□□□ 1.59
HMGA2-206ENST00000536545 NR3C1P04150 777 aa25.01■■□□□ 1.59
HMGA2-206ENST00000536545 RARRES1P49788 294 aa25.01■■□□□ 1.59
HMGA2-206ENST00000536545 PPATQ06203 517 aa25.01■■□□□ 1.59
HMGA2-206ENST00000536545 TSR1Q2NL82 804 aaKnown RBP25.01■■□□□ 1.59
HMGA2-206ENST00000536545 C4orf19Q8IY42 314 aa25.01■■□□□ 1.59
HMGA2-206ENST00000536545 PROCA1Q8NCQ7 364 aaPredicted RBP25.01■■□□□ 1.59
HMGA2-206ENST00000536545 ZC3H15Q8WU90 426 aaKnown RBP25.01■■□□□ 1.59
HMGA2-206ENST00000536545 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.01■■□□□ 1.59
HMGA2-206ENST00000536545 A0A0U1RQJ8 604 aa25■■□□□ 1.59
HMGA2-206ENST00000536545 TGFB1I1O43294 461 aa25■■□□□ 1.59
HMGA2-206ENST00000536545 KCNA2P16389 499 aa25■■□□□ 1.59
HMGA2-206ENST00000536545 HNRNPH3P31942 346 aaKnown RBP25■■□□□ 1.59
HMGA2-206ENST00000536545 CDK17Q00537 523 aa25■■□□□ 1.59
HMGA2-206ENST00000536545 NFIL3Q16649 462 aa25■■□□□ 1.59
HMGA2-206ENST00000536545 ZNF746Q6NUN9 644 aaPredicted RBP25■■□□□ 1.59
HMGA2-206ENST00000536545 ZNF720Q7Z2F6 126 aa25■■□□□ 1.59
HMGA2-206ENST00000536545 FRMD5Q7Z6J6 570 aa25■■□□□ 1.59
HMGA2-206ENST00000536545 FAM178BQ8IXR5 827 aa25■■□□□ 1.59
HMGA2-206ENST00000536545 SMCR8Q8TEV9 937 aaPredicted RBP25■■□□□ 1.59
HMGA2-206ENST00000536545 ATRIPQ8WXE1 791 aa25■■□□□ 1.59
HMGA2-206ENST00000536545 TSC1Q92574 1164 aa25■■□□□ 1.59
HMGA2-206ENST00000536545 FAM207AQ9NSI2 230 aaPredicted RBP25■■□□□ 1.59
HMGA2-206ENST00000536545 KIAA1217Q5T5P2 1943 aa25■■□□□ 1.59
HMGA2-206ENST00000536545 SPDYE5A6NIY4 337 aa25■■□□□ 1.59
HMGA2-206ENST00000536545 SLC16A3O15427 465 aaKnown RBP25■■□□□ 1.59
HMGA2-206ENST00000536545 STAM2O75886 525 aa25■■□□□ 1.59
HMGA2-206ENST00000536545 NDUFA10O95299 355 aa25■■□□□ 1.59
HMGA2-206ENST00000536545 EPHX2P34913 555 aa25■■□□□ 1.59
HMGA2-206ENST00000536545 PSMC5P62195 406 aa25■■□□□ 1.59
HMGA2-206ENST00000536545 KCNMA1Q12791 1236 aa25■■□□□ 1.59
HMGA2-206ENST00000536545 ERO1BQ86YB8 467 aa25■■□□□ 1.59
HMGA2-206ENST00000536545 CCDC155Q8N6L0 562 aa25■■□□□ 1.59
HMGA2-206ENST00000536545 ZNF397Q8NF99 534 aaPredicted RBP25■■□□□ 1.59
HMGA2-206ENST00000536545 CLMNQ96JQ2 1002 aa25■■□□□ 1.59
HMGA2-206ENST00000536545 TCEAL9Q9UHQ7 104 aa25■■□□□ 1.59
HMGA2-206ENST00000536545 REXO2Q9Y3B8 237 aaKnown RBP25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms