RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 ADAM9Q13443 819 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 MTF1Q14872 753 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 KRT31Q15323 416 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 DPH6Q7L8W6 267 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 GOLGA1Q92805 767 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 REEP2Q9BRK0 252 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 GLT8D2Q9H1C3 349 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 ANKFY1Q9P2R3 1169 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 COL11A2P13942 1736 aaPredicted RBP9.04□□□□□ -0.96
ABCA4-207ENST00000536513 GLTPD2A6NH11 291 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 A6NJR5 290 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 SLC16A4O15374 487 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 MYBP10242 640 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 DLATP10515 647 aaKnown RBP9.04□□□□□ -0.96
ABCA4-207ENST00000536513 MAP2K2P36507 400 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 TMEM62Q0P6H9 643 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 COASYQ13057 564 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 AP3B2Q13367 1082 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 SYCP1Q15431 976 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 LY6KQ17RY6 165 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 SEZ6Q53EL9 994 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 ZNF658Q5TYW1 1059 aaPredicted RBP9.04□□□□□ -0.96
ABCA4-207ENST00000536513 SPATA1Q5VX52 437 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 DNAAF5Q86Y56 855 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 GDAP1L1Q96MZ0 367 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 NT5C3AQ9H0P0 336 aa9.04□□□□□ -0.96
ABCA4-207ENST00000536513 NKRFO15226 690 aaKnown RBP eCLIP9.03□□□□□ -0.96
ABCA4-207ENST00000536513 GRIN3BO60391 1043 aa9.03□□□□□ -0.96
ABCA4-207ENST00000536513 EXOC3O60645 756 aa9.03□□□□□ -0.96
ABCA4-207ENST00000536513 CYP2B6P20813 491 aa9.03□□□□□ -0.96
ABCA4-207ENST00000536513 NR2F2P24468 414 aa9.03□□□□□ -0.96
ABCA4-207ENST00000536513 PRAMEF19Q5SWL8 479 aa9.03□□□□□ -0.96
ABCA4-207ENST00000536513 LMBRD2Q68DH5 695 aaPredicted RBP9.03□□□□□ -0.96
ABCA4-207ENST00000536513 CEP57Q86XR8 500 aa9.03□□□□□ -0.96
ABCA4-207ENST00000536513 NSUN6Q8TEA1 469 aaKnown RBP9.03□□□□□ -0.96
ABCA4-207ENST00000536513 PPM1EQ8WY54 764 aa9.03□□□□□ -0.96
ABCA4-207ENST00000536513 TMEM143Q96AN5 459 aa9.03□□□□□ -0.96
ABCA4-207ENST00000536513 TUBGCP2Q9BSJ2 902 aa9.03□□□□□ -0.96
ABCA4-207ENST00000536513 GBP3Q9H0R5 595 aa9.03□□□□□ -0.96
ABCA4-207ENST00000536513 BLOC1S4Q9NUP1 217 aa9.03□□□□□ -0.96
ABCA4-207ENST00000536513 MYH6P13533 1939 aa9.03□□□□□ -0.96
ABCA4-207ENST00000536513 GCFC2P16383 781 aaKnown RBP9.03□□□□□ -0.96
ABCA4-207ENST00000536513 CYP2C19P33261 490 aa9.03□□□□□ -0.96
ABCA4-207ENST00000536513 LIG3P49916 1009 aa9.03□□□□□ -0.96
ABCA4-207ENST00000536513 HERVK_113P62684 666 aa9.03□□□□□ -0.96
ABCA4-207ENST00000536513 RBL2Q08999 1139 aa9.03□□□□□ -0.96
ABCA4-207ENST00000536513 ARHGAP44Q17R89 818 aa9.03□□□□□ -0.96
ABCA4-207ENST00000536513 RNF19AQ9NV58 838 aa9.03□□□□□ -0.96
ABCA4-207ENST00000536513 SNCAIPQ9Y6H5 919 aa9.03□□□□□ -0.96
ABCA4-207ENST00000536513 POLR2AP24928 1970 aaKnown RBP9.03□□□□□ -0.96
ABCA4-207ENST00000536513 SPDYE16A6NNV3 312 aaPredicted RBP9.03□□□□□ -0.96
ABCA4-207ENST00000536513 ATP2C2O75185 946 aa9.03□□□□□ -0.96
ABCA4-207ENST00000536513 USP11P51784 963 aa9.03□□□□□ -0.96
ABCA4-207ENST00000536513 CASP5P51878 434 aa9.03□□□□□ -0.96
ABCA4-207ENST00000536513 ETF1P62495 437 aaKnown RBP9.03□□□□□ -0.96
ABCA4-207ENST00000536513 KCTD19Q17RG1 926 aaPredicted RBP9.03□□□□□ -0.96
ABCA4-207ENST00000536513 AK8Q96MA6 479 aa9.03□□□□□ -0.96
ABCA4-207ENST00000536513 PDCD2LQ9BRP1 358 aa9.03□□□□□ -0.96
ABCA4-207ENST00000536513 PORCNQ9H237 461 aa9.03□□□□□ -0.96
ABCA4-207ENST00000536513 SLC38A10Q9HBR0 1119 aa9.03□□□□□ -0.96
ABCA4-207ENST00000536513 BTBD7Q9P203 1132 aa9.03□□□□□ -0.96
ABCA4-207ENST00000536513 TUBE1Q9UJT0 475 aa9.03□□□□□ -0.96
ABCA4-207ENST00000536513 LAMA2P24043 3122 aaKnown RBP9.03□□□□□ -0.96
ABCA4-207ENST00000536513 SOWAHDA6NJG2 315 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 LAD1O00515 517 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 EBAG9O00559 213 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 NCAPHQ15003 741 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 TKFCQ3LXA3 575 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 GNPTABQ3T906 1256 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 PADI6Q6TGC4 694 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 LRRC71Q8N4P6 559 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 TRAPPC12Q8WVT3 735 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 P2RX5Q93086 422 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 GBA2Q9HCG7 927 aaPredicted RBP9.02□□□□□ -0.97
ABCA4-207ENST00000536513 ZNHIT6Q9NWK9 470 aaKnown RBP9.02□□□□□ -0.97
ABCA4-207ENST00000536513 GUCA1BQ9UMX6 200 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 ESYT2A0FGR8 921 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 PPP1R3GB7ZBB8 358 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 hCG_1984214I3L0E3 225 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 PEX14O75381 377 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 SREBF1P36956 1147 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 COPB1P53618 953 aaKnown RBP9.02□□□□□ -0.97
ABCA4-207ENST00000536513 RNASE9P60153 205 aaKnown RBP9.02□□□□□ -0.97
ABCA4-207ENST00000536513 CYP27A1Q02318 531 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 LLGL1Q15334 1064 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 TMEM63BQ5T3F8 832 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 FKBP1CQ5VVH2 108 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 HS2ST1Q7LGA3 356 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 KIAA1328Q86T90 577 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 ERO1BQ86YB8 467 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 ZNF713Q8N859 430 aaPredicted RBP9.02□□□□□ -0.97
ABCA4-207ENST00000536513 DAGLBQ8NCG7 672 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 GOLGA5Q8TBA6 731 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 SAAL1Q96ER3 474 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 NLRP4Q96MN2 994 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 SPAG5Q96R06 1193 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 BAG1Q99933 345 aaPredicted RBP9.02□□□□□ -0.97
ABCA4-207ENST00000536513 MXRA8Q9BRK3 442 aa9.02□□□□□ -0.97
ABCA4-207ENST00000536513 PYM1Q9BRP8 204 aaKnown RBP9.02□□□□□ -0.97
ABCA4-207ENST00000536513 IRX2Q9BZI1 471 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms