RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 GPR135Q8IZ08 494 aa4.19□□□□□ -1.74
SKA3-207ENST00000536239 RPUSD2Q8IZ73 545 aaKnown RBP4.19□□□□□ -1.74
SKA3-207ENST00000536239 D2HGDHQ8N465 521 aa4.19□□□□□ -1.74
SKA3-207ENST00000536239 HECAQ9UBI9 543 aaPredicted RBP4.19□□□□□ -1.74
SKA3-207ENST00000536239 CAPN14A8MX76 684 aa4.18□□□□□ -1.74
SKA3-207ENST00000536239 SMAD7O15105 426 aaKnown RBP4.18□□□□□ -1.74
SKA3-207ENST00000536239 CYP27B1O15528 508 aa4.18□□□□□ -1.74
SKA3-207ENST00000536239 DLX3O60479 287 aa4.18□□□□□ -1.74
SKA3-207ENST00000536239 DDAH1O94760 285 aa4.18□□□□□ -1.74
SKA3-207ENST00000536239 ADRA1BP35368 520 aa4.18□□□□□ -1.74
SKA3-207ENST00000536239 PPP2R2AP63151 447 aa4.18□□□□□ -1.74
SKA3-207ENST00000536239 RRP1BQ14684 758 aaKnown RBP4.18□□□□□ -1.74
SKA3-207ENST00000536239 EIF4HQ15056 248 aaKnown RBP4.18□□□□□ -1.74
SKA3-207ENST00000536239 KIZQ2M2Z5 673 aa4.18□□□□□ -1.74
SKA3-207ENST00000536239 LARP1BQ659C4 914 aaKnown RBP4.18□□□□□ -1.74
SKA3-207ENST00000536239 MRM1Q6IN84 353 aaKnown RBP4.18□□□□□ -1.74
SKA3-207ENST00000536239 CXXC5Q7LFL8 322 aaKnown RBP4.18□□□□□ -1.74
SKA3-207ENST00000536239 IER2Q9BTL4 223 aa4.18□□□□□ -1.74
SKA3-207ENST00000536239 ACTR10Q9NZ32 417 aa4.18□□□□□ -1.74
SKA3-207ENST00000536239 FBXO10Q9UK96 956 aa4.18□□□□□ -1.74
SKA3-207ENST00000536239 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.17□□□□□ -1.74
SKA3-207ENST00000536239 RECKO95980 971 aa4.17□□□□□ -1.74
SKA3-207ENST00000536239 GJA4P35212 333 aa4.17□□□□□ -1.74
SKA3-207ENST00000536239 IL13RA1P78552 427 aa4.17□□□□□ -1.74
SKA3-207ENST00000536239 FSTL1Q12841 308 aa4.17□□□□□ -1.74
SKA3-207ENST00000536239 BTBD8Q5XKL5 378 aa4.17□□□□□ -1.74
SKA3-207ENST00000536239 TRIM68Q6AZZ1 485 aa4.17□□□□□ -1.74
SKA3-207ENST00000536239 SH3RF2Q8TEC5 729 aa4.17□□□□□ -1.74
SKA3-207ENST00000536239 DCAF4Q8WV16 495 aa4.17□□□□□ -1.74
SKA3-207ENST00000536239 CD244Q9BZW8 370 aa4.17□□□□□ -1.74
SKA3-207ENST00000536239 ARHGAP28Q9P2N2 729 aa4.17□□□□□ -1.74
SKA3-207ENST00000536239 A0A1W2PQU0 124 aa4.16□□□□□ -1.74
SKA3-207ENST00000536239 PMS2P1A4D2B8 440 aa4.16□□□□□ -1.74
SKA3-207ENST00000536239 SOD2P04179 222 aa4.16□□□□□ -1.74
SKA3-207ENST00000536239 ADCY8P40145 1251 aa4.16□□□□□ -1.74
SKA3-207ENST00000536239 ZC3H6P61129 1189 aaKnown RBP4.16□□□□□ -1.74
SKA3-207ENST00000536239 SLC25A3Q00325 362 aa4.16□□□□□ -1.74
SKA3-207ENST00000536239 CRHR2Q13324 411 aa4.16□□□□□ -1.74
SKA3-207ENST00000536239 PCOLCEQ15113 449 aa4.16□□□□□ -1.74
SKA3-207ENST00000536239 KCNT2Q6UVM3 1135 aa4.16□□□□□ -1.74
SKA3-207ENST00000536239 FILIP1Q7Z7B0 1213 aa4.16□□□□□ -1.74
SKA3-207ENST00000536239 TMEM176AQ96HP8 235 aa4.16□□□□□ -1.74
SKA3-207ENST00000536239 ZFYVE21Q9BQ24 234 aa4.16□□□□□ -1.74
SKA3-207ENST00000536239 EPN3Q9H201 632 aa4.16□□□□□ -1.74
SKA3-207ENST00000536239 OR10A2Q9H208 303 aa4.16□□□□□ -1.74
SKA3-207ENST00000536239 GPRC5BQ9NZH0 403 aa4.16□□□□□ -1.74
SKA3-207ENST00000536239 CDC42EP3Q9UKI2 254 aa4.16□□□□□ -1.74
SKA3-207ENST00000536239 TCRBV5S4A2TA0A5A2 114 aa4.15□□□□□ -1.75
SKA3-207ENST00000536239 FAM90A27PA6NNH2 459 aa4.15□□□□□ -1.75
SKA3-207ENST00000536239 FAM47E-STBD1D6RA91 191 aa4.15□□□□□ -1.75
SKA3-207ENST00000536239 AGRPO00253 132 aa4.15□□□□□ -1.75
SKA3-207ENST00000536239 SLC26A4O43511 780 aa4.15□□□□□ -1.75
SKA3-207ENST00000536239 PROZP22891 400 aa4.15□□□□□ -1.75
SKA3-207ENST00000536239 MRE11P49959 708 aa4.15□□□□□ -1.75
SKA3-207ENST00000536239 GPR85P60893 370 aa4.15□□□□□ -1.75
SKA3-207ENST00000536239 HGFACQ04756 655 aa4.15□□□□□ -1.75
SKA3-207ENST00000536239 STILQ15468 1287 aa4.15□□□□□ -1.75
SKA3-207ENST00000536239 SLC10A6Q3KNW5 377 aa4.15□□□□□ -1.75
SKA3-207ENST00000536239 TNNI3KQ59H18 835 aa4.15□□□□□ -1.75
SKA3-207ENST00000536239 EEPD1Q7L9B9 569 aa4.15□□□□□ -1.75
SKA3-207ENST00000536239 NT5DC4Q86YG4 428 aa4.15□□□□□ -1.75
SKA3-207ENST00000536239 IFNL3Q8IZI9 196 aa4.15□□□□□ -1.75
SKA3-207ENST00000536239 SHCBP1Q8NEM2 672 aa4.15□□□□□ -1.75
SKA3-207ENST00000536239 OR14K1Q8NGZ2 314 aa4.15□□□□□ -1.75
SKA3-207ENST00000536239 WNK4Q96J92 1243 aa4.15□□□□□ -1.75
SKA3-207ENST00000536239 MPHOSPH9Q99550 1183 aa4.15□□□□□ -1.75
SKA3-207ENST00000536239 AGO3Q9H9G7 860 aaKnown RBP4.15□□□□□ -1.75
SKA3-207ENST00000536239 INCENPQ9NQS7 918 aa4.15□□□□□ -1.75
SKA3-207ENST00000536239 GALNT8Q9NY28 637 aa4.15□□□□□ -1.75
SKA3-207ENST00000536239 MRVI1Q9Y6F6 885 aa4.15□□□□□ -1.75
SKA3-207ENST00000536239 RPS6KA4O75676 772 aa4.14□□□□□ -1.75
SKA3-207ENST00000536239 GCP02774 474 aa4.14□□□□□ -1.75
SKA3-207ENST00000536239 PTPN1P18031 435 aaKnown RBP4.14□□□□□ -1.75
SKA3-207ENST00000536239 PTGS1P23219 599 aa4.14□□□□□ -1.75
SKA3-207ENST00000536239 VAMP1P23763 118 aa4.14□□□□□ -1.75
SKA3-207ENST00000536239 MEOX1P50221 254 aa4.14□□□□□ -1.75
SKA3-207ENST00000536239 MRPS21P82921 87 aaKnown RBP4.14□□□□□ -1.75
SKA3-207ENST00000536239 FXNQ16595 210 aa4.14□□□□□ -1.75
SKA3-207ENST00000536239 NLGN4XQ8N0W4 816 aa4.14□□□□□ -1.75
SKA3-207ENST00000536239 GPR150Q8NGU9 434 aa4.14□□□□□ -1.75
SKA3-207ENST00000536239 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.14□□□□□ -1.75
SKA3-207ENST00000536239 IPPKQ9H8X2 491 aa4.14□□□□□ -1.75
SKA3-207ENST00000536239 RIC8BQ9NVN3 520 aa4.14□□□□□ -1.75
SKA3-207ENST00000536239 A0A0G2JNJ9 132 aa4.13□□□□□ -1.75
SKA3-207ENST00000536239 NUDT3O95989 172 aa4.13□□□□□ -1.75
SKA3-207ENST00000536239 ATF4P18848 351 aaPredicted RBP4.13□□□□□ -1.75
SKA3-207ENST00000536239 HDLBPQ00341 1268 aaKnown RBP4.13□□□□□ -1.75
SKA3-207ENST00000536239 NTRK3Q16288 839 aa4.13□□□□□ -1.75
SKA3-207ENST00000536239 OTOP2Q7RTS6 562 aa4.13□□□□□ -1.75
SKA3-207ENST00000536239 RTKN2Q8IZC4 609 aa4.13□□□□□ -1.75
SKA3-207ENST00000536239 ANKRD35Q8N283 1001 aa4.13□□□□□ -1.75
SKA3-207ENST00000536239 BTBD2Q9BX70 525 aa4.13□□□□□ -1.75
SKA3-207ENST00000536239 Q9UFV3 132 aa4.13□□□□□ -1.75
SKA3-207ENST00000536239 SRPK3Q9UPE1 567 aa4.13□□□□□ -1.75
SKA3-207ENST00000536239 INPP5FQ9Y2H2 1132 aa4.13□□□□□ -1.75
SKA3-207ENST00000536239 SH3BP1Q9Y3L3 701 aa4.13□□□□□ -1.75
SKA3-207ENST00000536239 RHOBTB3O94955 611 aa4.12□□□□□ -1.75
SKA3-207ENST00000536239 GJB6O95452 261 aa4.12□□□□□ -1.75
SKA3-207ENST00000536239 LMNAP02545 664 aaKnown RBP4.12□□□□□ -1.75
SKA3-207ENST00000536239 PTGS2P35354 604 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms