RNA–Protein interactions for RNA: ENST00000536034.1

LINC02449-203, Transcript of long intergenic non-protein coding RNA 2449, humanhuman

TSL 3 BASIC

Gene LINC02449, Length 451 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02449-203ENST00000536034 ZNF862O60290 1169 aa16.98■□□□□ 0.31
LINC02449-203ENST00000536034 DKC1O60832 514 aaKnown RBP eCLIP16.98■□□□□ 0.31
LINC02449-203ENST00000536034 ATP2B1P20020 1258 aa16.98■□□□□ 0.31
LINC02449-203ENST00000536034 SPIRE1Q08AE8 756 aa16.98■□□□□ 0.31
LINC02449-203ENST00000536034 SHHQ15465 462 aa16.98■□□□□ 0.31
LINC02449-203ENST00000536034 LRIT3Q3SXY7 679 aa16.98■□□□□ 0.31
LINC02449-203ENST00000536034 TMEM240Q5SV17 173 aa16.98■□□□□ 0.31
LINC02449-203ENST00000536034 C16orf59Q7L2K0 433 aa16.98■□□□□ 0.31
LINC02449-203ENST00000536034 RSPH3Q86UC2 560 aa16.98■□□□□ 0.31
LINC02449-203ENST00000536034 WNT8BQ93098 351 aa16.98■□□□□ 0.31
LINC02449-203ENST00000536034 NRBP2Q9NSY0 501 aa16.98■□□□□ 0.31
LINC02449-203ENST00000536034 CEP131Q9UPN4 1083 aa16.98■□□□□ 0.31
LINC02449-203ENST00000536034 OATP04181 439 aa16.97■□□□□ 0.31
LINC02449-203ENST00000536034 P4HBP07237 508 aaKnown RBP16.97■□□□□ 0.31
LINC02449-203ENST00000536034 THPOP40225 353 aa16.97■□□□□ 0.31
LINC02449-203ENST00000536034 IGBP1P78318 339 aa16.97■□□□□ 0.31
LINC02449-203ENST00000536034 PRKCEQ02156 737 aa16.97■□□□□ 0.31
LINC02449-203ENST00000536034 EPHA7Q15375 998 aa16.97■□□□□ 0.31
LINC02449-203ENST00000536034 RILPL1Q5EBL4 403 aa16.97■□□□□ 0.31
LINC02449-203ENST00000536034 ZNF618Q5T7W0 954 aa16.97■□□□□ 0.31
LINC02449-203ENST00000536034 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.97■□□□□ 0.31
LINC02449-203ENST00000536034 TTC12Q9H892 705 aaPredicted RBP16.97■□□□□ 0.31
LINC02449-203ENST00000536034 PCDHA2Q9Y5H9 948 aa16.97■□□□□ 0.31
LINC02449-203ENST00000536034 TANC1Q9C0D5 1861 aa16.97■□□□□ 0.31
LINC02449-203ENST00000536034 SMIM35A0A1B0GVV1 85 aa16.96■□□□□ 0.31
LINC02449-203ENST00000536034 RSPH10B2B2RC85 870 aa16.96■□□□□ 0.31
LINC02449-203ENST00000536034 ZBTB42B2RXF5 422 aa16.96■□□□□ 0.31
LINC02449-203ENST00000536034 EML1O00423 815 aa16.96■□□□□ 0.31
LINC02449-203ENST00000536034 FGBP02675 491 aa16.96■□□□□ 0.31
LINC02449-203ENST00000536034 RSPH10BP0C881 870 aa16.96■□□□□ 0.31
LINC02449-203ENST00000536034 TXKP42681 527 aa16.96■□□□□ 0.31
LINC02449-203ENST00000536034 QARSP47897 775 aaKnown RBP16.96■□□□□ 0.31
LINC02449-203ENST00000536034 TOB1P50616 345 aaPredicted RBP16.96■□□□□ 0.31
LINC02449-203ENST00000536034 PSMC5P62195 406 aa16.96■□□□□ 0.31
LINC02449-203ENST00000536034 ZNF174Q15697 407 aa16.96■□□□□ 0.31
LINC02449-203ENST00000536034 UGCGQ16739 394 aa16.96■□□□□ 0.31
LINC02449-203ENST00000536034 XKR3Q5GH77 459 aa16.96■□□□□ 0.31
LINC02449-203ENST00000536034 FAM26DQ5JW98 314 aa16.96■□□□□ 0.31
LINC02449-203ENST00000536034 C9orf50Q5SZB4 431 aa16.96■□□□□ 0.31
LINC02449-203ENST00000536034 TRAF7Q6Q0C0 670 aa16.96■□□□□ 0.31
LINC02449-203ENST00000536034 MTHFD1LQ6UB35 978 aa16.96■□□□□ 0.31
LINC02449-203ENST00000536034 RUFY4Q6ZNE9 571 aa16.96■□□□□ 0.31
LINC02449-203ENST00000536034 ZNF365Q70YC5 407 aa16.96■□□□□ 0.31
LINC02449-203ENST00000536034 BRAPQ7Z569 592 aa16.96■□□□□ 0.31
LINC02449-203ENST00000536034 MTIF3Q9H2K0 278 aaKnown RBP16.96■□□□□ 0.31
LINC02449-203ENST00000536034 TMEM60Q9H2L4 133 aa16.96■□□□□ 0.31
LINC02449-203ENST00000536034 TRIOBPQ9H2D6 2365 aa16.95■□□□□ 0.3
LINC02449-203ENST00000536034 LAD1O00515 517 aa16.95■□□□□ 0.3
LINC02449-203ENST00000536034 MAGEB2O15479 319 aa16.95■□□□□ 0.3
LINC02449-203ENST00000536034 CXCL10P02778 98 aa16.95■□□□□ 0.3
LINC02449-203ENST00000536034 OR52Z1P0C646 297 aa16.95■□□□□ 0.3
LINC02449-203ENST00000536034 ACRP10323 421 aa16.95■□□□□ 0.3
LINC02449-203ENST00000536034 KLRC1P26715 233 aa16.95■□□□□ 0.3
LINC02449-203ENST00000536034 RASIP1Q5U651 963 aa16.95■□□□□ 0.3
LINC02449-203ENST00000536034 NCAPH2Q6IBW4 605 aa16.95■□□□□ 0.3
LINC02449-203ENST00000536034 NME8Q8N427 588 aa16.95■□□□□ 0.3
LINC02449-203ENST00000536034 NEK9Q8TD19 979 aa16.95■□□□□ 0.3
LINC02449-203ENST00000536034 TRAPPC12Q8WVT3 735 aa16.95■□□□□ 0.3
LINC02449-203ENST00000536034 HERVK_113Q902F9 699 aa16.95■□□□□ 0.3
LINC02449-203ENST00000536034 VWCEQ96DN2 955 aa16.95■□□□□ 0.3
LINC02449-203ENST00000536034 RNPC3Q96LT9 517 aaKnown RBP16.95■□□□□ 0.3
LINC02449-203ENST00000536034 NIFKQ9BYG3 293 aaKnown RBP16.95■□□□□ 0.3
LINC02449-203ENST00000536034 ACTN1P12814 892 aa16.94■□□□□ 0.3
LINC02449-203ENST00000536034 PDIA4P13667 645 aaKnown RBP16.94■□□□□ 0.3
LINC02449-203ENST00000536034 DEFB128Q7Z7B8 93 aa16.94■□□□□ 0.3
LINC02449-203ENST00000536034 C4orf32Q8N8J7 132 aa16.94■□□□□ 0.3
LINC02449-203ENST00000536034 BANK1Q8NDB2 785 aa16.94■□□□□ 0.3
LINC02449-203ENST00000536034 DNAJB3Q8WWF6 145 aa16.94■□□□□ 0.3
LINC02449-203ENST00000536034 FTOQ9C0B1 505 aaKnown RBP eCLIP16.94■□□□□ 0.3
LINC02449-203ENST00000536034 TRIP12Q14669 1992 aaPredicted RBP16.93■□□□□ 0.3
LINC02449-203ENST00000536034 VPS37CA5D8V6 355 aaPredicted RBP16.93■□□□□ 0.3
LINC02449-203ENST00000536034 NBNO60934 754 aa16.93■□□□□ 0.3
LINC02449-203ENST00000536034 STBD1O95210 358 aa16.93■□□□□ 0.3
LINC02449-203ENST00000536034 C22orf31O95567 290 aa16.93■□□□□ 0.3
LINC02449-203ENST00000536034 SYT1P21579 422 aa16.93■□□□□ 0.3
LINC02449-203ENST00000536034 MBTPS1Q14703 1052 aa16.93■□□□□ 0.3
LINC02449-203ENST00000536034 GPNMBQ14956 572 aa16.93■□□□□ 0.3
LINC02449-203ENST00000536034 TARBP2Q15633 366 aaKnown RBP16.93■□□□□ 0.3
LINC02449-203ENST00000536034 TMEM266Q2M3C6 531 aa16.93■□□□□ 0.3
LINC02449-203ENST00000536034 IER5Q5VY09 327 aa16.93■□□□□ 0.3
LINC02449-203ENST00000536034 C4orf19Q8IY42 314 aa16.93■□□□□ 0.3
LINC02449-203ENST00000536034 EIF2AK1Q9BQI3 630 aaKnown RBP16.93■□□□□ 0.3
LINC02449-203ENST00000536034 LXNQ9BS40 222 aa16.93■□□□□ 0.3
LINC02449-203ENST00000536034 ZSWIM4Q9H7M6 989 aa16.93■□□□□ 0.3
LINC02449-203ENST00000536034 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.93■□□□□ 0.3
LINC02449-203ENST00000536034 PPME1Q9Y570 386 aa16.93■□□□□ 0.3
LINC02449-203ENST00000536034 PCDHB6Q9Y5E3 794 aa16.93■□□□□ 0.3
LINC02449-203ENST00000536034 KAT6AQ92794 2004 aa16.92■□□□□ 0.3
LINC02449-203ENST00000536034 LAMA3Q16787 3333 aa16.92■□□□□ 0.3
LINC02449-203ENST00000536034 MYH9P35579 1960 aaKnown RBP16.92■□□□□ 0.3
LINC02449-203ENST00000536034 DDX11L8A8MPP1 907 aa16.92■□□□□ 0.3
LINC02449-203ENST00000536034 BAIAP3O94812 1187 aa16.92■□□□□ 0.3
LINC02449-203ENST00000536034 HSP90AA1P07900 732 aaKnown RBP16.92■□□□□ 0.3
LINC02449-203ENST00000536034 CTSHP09668 335 aa16.92■□□□□ 0.3
LINC02449-203ENST00000536034 PRPHP41219 470 aa16.92■□□□□ 0.3
LINC02449-203ENST00000536034 FXR2P51116 673 aaKnown RBP eCLIP16.92■□□□□ 0.3
LINC02449-203ENST00000536034 MRPS6P82932 125 aaKnown RBP16.92■□□□□ 0.3
LINC02449-203ENST00000536034 MGAT3Q09327 533 aa16.92■□□□□ 0.3
LINC02449-203ENST00000536034 PTGDRQ13258 359 aa16.92■□□□□ 0.3
LINC02449-203ENST00000536034 NBR1Q14596 966 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms