RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 EPM2AIP1Q7L775 607 aaPredicted RBP14.45□□□□□ -0.1
LDLR-203ENST00000535915 FLAD1Q8NFF5 587 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 EIF2AK1Q9BQI3 630 aaKnown RBP14.45□□□□□ -0.1
LDLR-203ENST00000535915 FAM204AQ9H8W3 233 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 RGL1Q9NZL6 768 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 RABGAP1Q9Y3P9 1069 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 ENTPD3O75355 529 aa14.44□□□□□ -0.1
LDLR-203ENST00000535915 GCNT3O95395 438 aa14.44□□□□□ -0.1
LDLR-203ENST00000535915 APBA3O96018 575 aa14.44□□□□□ -0.1
LDLR-203ENST00000535915 DNA2P51530 1060 aa14.44□□□□□ -0.1
LDLR-203ENST00000535915 ZSCAN26Q16670 478 aa14.44□□□□□ -0.1
LDLR-203ENST00000535915 BTNL9Q6UXG8 535 aa14.44□□□□□ -0.1
LDLR-203ENST00000535915 MS4A14Q96JA4 679 aa14.44□□□□□ -0.1
LDLR-203ENST00000535915 PRMT6Q96LA8 375 aaPredicted RBP14.44□□□□□ -0.1
LDLR-203ENST00000535915 SPAG5Q96R06 1193 aa14.44□□□□□ -0.1
LDLR-203ENST00000535915 RUSC1Q9BVN2 902 aa14.44□□□□□ -0.1
LDLR-203ENST00000535915 ATRNL1Q5VV63 1379 aa14.44□□□□□ -0.1
LDLR-203ENST00000535915 EML1O00423 815 aa14.44□□□□□ -0.1
LDLR-203ENST00000535915 CFAP221Q4G0U5 840 aa14.44□□□□□ -0.1
LDLR-203ENST00000535915 TCERG1LQ5VWI1 586 aa14.44□□□□□ -0.1
LDLR-203ENST00000535915 GOLGA6L1Q8N7Z2 621 aa14.44□□□□□ -0.1
LDLR-203ENST00000535915 FTCDO95954 541 aa14.43□□□□□ -0.1
LDLR-203ENST00000535915 CFBP00751 764 aa14.43□□□□□ -0.1
LDLR-203ENST00000535915 STAT2P52630 851 aa14.43□□□□□ -0.1
LDLR-203ENST00000535915 EXOC3L4Q17RC7 722 aa14.43□□□□□ -0.1
LDLR-203ENST00000535915 STYK1Q6J9G0 422 aa14.43□□□□□ -0.1
LDLR-203ENST00000535915 C8orf74Q6P047 294 aa14.43□□□□□ -0.1
LDLR-203ENST00000535915 AENQ8WTP8 325 aaKnown RBP14.43□□□□□ -0.1
LDLR-203ENST00000535915 RIN2Q8WYP3 895 aaPredicted RBP14.43□□□□□ -0.1
LDLR-203ENST00000535915 RUBCNQ92622 972 aa14.43□□□□□ -0.1
LDLR-203ENST00000535915 POLR3CQ9BUI4 534 aaPredicted RBP14.43□□□□□ -0.1
LDLR-203ENST00000535915 PACSIN1Q9BY11 444 aa14.43□□□□□ -0.1
LDLR-203ENST00000535915 TYW1Q9NV66 732 aaKnown RBP14.43□□□□□ -0.1
LDLR-203ENST00000535915 SFI1A8K8P3 1242 aa14.43□□□□□ -0.1
LDLR-203ENST00000535915 AKAP3O75969 853 aa14.43□□□□□ -0.1
LDLR-203ENST00000535915 EYA4O95677 639 aa14.43□□□□□ -0.1
LDLR-203ENST00000535915 NR3C1P04150 777 aa14.43□□□□□ -0.1
LDLR-203ENST00000535915 CYP3A4P08684 503 aa14.43□□□□□ -0.1
LDLR-203ENST00000535915 UCHL3P15374 230 aa14.43□□□□□ -0.1
LDLR-203ENST00000535915 RPL13P26373 211 aaKnown RBP14.43□□□□□ -0.1
LDLR-203ENST00000535915 GGCXP38435 758 aa14.43□□□□□ -0.1
LDLR-203ENST00000535915 ECE1P42892 770 aa14.43□□□□□ -0.1
LDLR-203ENST00000535915 CC2D2BQ6DHV5 1058 aa14.43□□□□□ -0.1
LDLR-203ENST00000535915 LEKR1Q6ZMV7 388 aa14.43□□□□□ -0.1
LDLR-203ENST00000535915 PIGOQ8TEQ8 1089 aa14.43□□□□□ -0.1
LDLR-203ENST00000535915 BCAS3Q9H6U6 928 aa14.43□□□□□ -0.1
LDLR-203ENST00000535915 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.43□□□□□ -0.1
LDLR-203ENST00000535915 RBM12Q9NTZ6 932 aaKnown RBP14.43□□□□□ -0.1
LDLR-203ENST00000535915 ZC3H4Q9UPT8 1303 aaKnown RBP14.43□□□□□ -0.1
LDLR-203ENST00000535915 PIK3CDO00329 1044 aa14.42□□□□□ -0.1
LDLR-203ENST00000535915 CLIC2O15247 247 aa14.42□□□□□ -0.1
LDLR-203ENST00000535915 EPB41P11171 864 aaKnown RBP14.42□□□□□ -0.1
LDLR-203ENST00000535915 PON1P27169 355 aa14.42□□□□□ -0.1
LDLR-203ENST00000535915 CHRNA5P30532 468 aa14.42□□□□□ -0.1
LDLR-203ENST00000535915 ACTN2P35609 894 aa14.42□□□□□ -0.1
LDLR-203ENST00000535915 PTK2Q05397 1052 aa14.42□□□□□ -0.1
LDLR-203ENST00000535915 CTTNQ14247 550 aaKnown RBP14.42□□□□□ -0.1
LDLR-203ENST00000535915 SLC30A10Q6XR72 485 aa14.42□□□□□ -0.1
LDLR-203ENST00000535915 SND1Q7KZF4 910 aaKnown RBP eCLIP14.42□□□□□ -0.12e-7■■■□□ 16.9
LDLR-203ENST00000535915 GOLGA5Q8TBA6 731 aa14.42□□□□□ -0.1
LDLR-203ENST00000535915 PLCB1Q9NQ66 1216 aa14.42□□□□□ -0.1
LDLR-203ENST00000535915 STIM2Q9P246 746 aa14.42□□□□□ -0.1
LDLR-203ENST00000535915 ASTN1O14525 1302 aa14.42□□□□□ -0.1
LDLR-203ENST00000535915 IGLV3-22A0A075B6J6 115 aa14.42□□□□□ -0.1
LDLR-203ENST00000535915 PLSCR1O15162 318 aa14.42□□□□□ -0.1
LDLR-203ENST00000535915 CHMP2AO43633 222 aa14.42□□□□□ -0.1
LDLR-203ENST00000535915 CASP4P49662 377 aa14.42□□□□□ -0.1
LDLR-203ENST00000535915 KCNA1Q09470 495 aa14.42□□□□□ -0.1
LDLR-203ENST00000535915 TPH2Q8IWU9 490 aa14.42□□□□□ -0.1
LDLR-203ENST00000535915 ARHGEF10LQ9HCE6 1279 aa14.42□□□□□ -0.1
LDLR-203ENST00000535915 GOLGA6BA6NDN3 693 aa14.41□□□□□ -0.1
LDLR-203ENST00000535915 BMT2Q1RMZ1 405 aa14.41□□□□□ -0.1
LDLR-203ENST00000535915 MUM1L1Q5H9M0 696 aa14.41□□□□□ -0.1
LDLR-203ENST00000535915 RINT1Q6NUQ1 792 aa14.41□□□□□ -0.1
LDLR-203ENST00000535915 IRF2BP2Q7Z5L9 587 aa14.41□□□□□ -0.1
LDLR-203ENST00000535915 METTL14Q9HCE5 456 aaKnown RBP14.41□□□□□ -0.1
LDLR-203ENST00000535915 RNF14Q9UBS8 474 aa14.41□□□□□ -0.1
LDLR-203ENST00000535915 PACSIN2Q9UNF0 486 aaPredicted RBP14.41□□□□□ -0.1
LDLR-203ENST00000535915 PCDHGC5Q9Y5F6 944 aa14.41□□□□□ -0.1
LDLR-203ENST00000535915 RBBP6Q7Z6E9 1792 aaKnown RBP14.41□□□□□ -0.1
LDLR-203ENST00000535915 TCP10L2B9ZVM9 353 aa14.41□□□□□ -0.1
LDLR-203ENST00000535915 FAM13AO94988 1023 aa14.41□□□□□ -0.1
LDLR-203ENST00000535915 MEI1Q5TIA1 1274 aa14.41□□□□□ -0.1
LDLR-203ENST00000535915 LRCH2Q5VUJ6 765 aa14.41□□□□□ -0.1
LDLR-203ENST00000535915 CCDC174Q6PII3 467 aa14.41□□□□□ -0.1
LDLR-203ENST00000535915 ZNF571Q7Z3V5 609 aaPredicted RBP14.41□□□□□ -0.1
LDLR-203ENST00000535915 AFAP1L1Q8TED9 768 aa14.41□□□□□ -0.1
LDLR-203ENST00000535915 WDR18Q9BV38 432 aa14.41□□□□□ -0.1
LDLR-203ENST00000535915 FEZ2Q9UHY8 353 aaPredicted RBP14.41□□□□□ -0.1
LDLR-203ENST00000535915 PCDHB13Q9Y5F0 798 aa14.41□□□□□ -0.1
LDLR-203ENST00000535915 GAP43P17677 238 aa14.4□□□□□ -0.1
LDLR-203ENST00000535915 UBXN2AP68543 259 aa14.4□□□□□ -0.1
LDLR-203ENST00000535915 DPY19L2P1Q6NXN4 242 aa14.4□□□□□ -0.1
LDLR-203ENST00000535915 GBP6Q6ZN66 633 aa14.4□□□□□ -0.1
LDLR-203ENST00000535915 OTOP1Q7RTM1 612 aa14.4□□□□□ -0.1
LDLR-203ENST00000535915 MYCT1Q8N699 235 aa14.4□□□□□ -0.1
LDLR-203ENST00000535915 DYDC2Q96IM9 177 aa14.4□□□□□ -0.1
LDLR-203ENST00000535915 OLFML3Q9NRN5 406 aa14.4□□□□□ -0.1
LDLR-203ENST00000535915 HERC5Q9UII4 1024 aaKnown RBP14.4□□□□□ -0.1
LDLR-203ENST00000535915 BZW2Q9Y6E2 419 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms