RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 TCTN1Q2MV58 587 aa10.06□□□□□ -0.8
CHD4-204ENST00000535810 MCTP2Q6DN12 878 aa10.06□□□□□ -0.8
CHD4-204ENST00000535810 CNKSR3Q6P9H4 555 aa10.06□□□□□ -0.8
CHD4-204ENST00000535810 PLA2G4DQ86XP0 818 aa10.06□□□□□ -0.8
CHD4-204ENST00000535810 USP38Q8NB14 1042 aa10.06□□□□□ -0.8
CHD4-204ENST00000535810 ADAMTS19Q8TE59 1207 aa10.06□□□□□ -0.8
CHD4-204ENST00000535810 ASB2Q96Q27 587 aa10.06□□□□□ -0.8
CHD4-204ENST00000535810 SLC9A7Q96T83 725 aa10.06□□□□□ -0.8
CHD4-204ENST00000535810 NKX2-4Q9H2Z4 354 aa10.06□□□□□ -0.8
CHD4-204ENST00000535810 SMARCAD1Q9H4L7 1026 aa10.06□□□□□ -0.8
CHD4-204ENST00000535810 SH3GLB2Q9NR46 395 aa10.06□□□□□ -0.8
CHD4-204ENST00000535810 TPCN1Q9ULQ1 816 aa10.06□□□□□ -0.8
CHD4-204ENST00000535810 PCDHA11Q9Y5I1 949 aa10.06□□□□□ -0.8
CHD4-204ENST00000535810 XIRP2A4UGR9 3374 aa10.06□□□□□ -0.8
CHD4-204ENST00000535810 MBLAC1A4D2B0 266 aaPredicted RBP10.05□□□□□ -0.8
CHD4-204ENST00000535810 IPO5O00410 1097 aaKnown RBP10.05□□□□□ -0.8
CHD4-204ENST00000535810 DHX15O43143 795 aaKnown RBP10.05□□□□□ -0.8
CHD4-204ENST00000535810 CTSHP09668 335 aa10.05□□□□□ -0.8
CHD4-204ENST00000535810 CIITAP33076 1130 aa10.05□□□□□ -0.8
CHD4-204ENST00000535810 AK2P54819 239 aa10.05□□□□□ -0.8
CHD4-204ENST00000535810 NLRP5P59047 1200 aa10.05□□□□□ -0.8
CHD4-204ENST00000535810 WDR5P61964 334 aaKnown RBP10.05□□□□□ -0.8
CHD4-204ENST00000535810 SETQ01105 290 aaPredicted RBP10.05□□□□□ -0.8
CHD4-204ENST00000535810 SSRP1Q08945 709 aaKnown RBP10.05□□□□□ -0.8
CHD4-204ENST00000535810 GRIK4Q16099 956 aa10.05□□□□□ -0.8
CHD4-204ENST00000535810 TAF2Q6P1X5 1199 aa10.05□□□□□ -0.8
CHD4-204ENST00000535810 CPLX2Q6PUV4 134 aaKnown RBP10.05□□□□□ -0.8
CHD4-204ENST00000535810 RUFY4Q6ZNE9 571 aa10.05□□□□□ -0.8
CHD4-204ENST00000535810 HERC6Q8IVU3 1022 aa10.05□□□□□ -0.8
CHD4-204ENST00000535810 PHOSPHO2Q8TCD6 241 aa10.05□□□□□ -0.8
CHD4-204ENST00000535810 OXER1Q8TDS5 423 aa10.05□□□□□ -0.8
CHD4-204ENST00000535810 LENG9Q96B70 501 aa10.05□□□□□ -0.8
CHD4-204ENST00000535810 AIFM3Q96NN9 605 aa10.05□□□□□ -0.8
CHD4-204ENST00000535810 UHRF1Q96T88 793 aaPredicted RBP10.05□□□□□ -0.8
CHD4-204ENST00000535810 AZI2Q9H6S1 392 aa10.05□□□□□ -0.8
CHD4-204ENST00000535810 TUBE1Q9UJT0 475 aa10.05□□□□□ -0.8
CHD4-204ENST00000535810 IGKV6D-21A0A0A0MT36 114 aa10.04□□□□□ -0.8
CHD4-204ENST00000535810 ABHD14A-ACY1A0A1B0GW23 586 aa10.04□□□□□ -0.8
CHD4-204ENST00000535810 M0R2N6 131 aa10.04□□□□□ -0.8
CHD4-204ENST00000535810 DDX39AO00148 427 aaKnown RBP10.04□□□□□ -0.8
CHD4-204ENST00000535810 EDIL3O43854 480 aa10.04□□□□□ -0.8
CHD4-204ENST00000535810 PFKFB2O60825 505 aa10.04□□□□□ -0.8
CHD4-204ENST00000535810 EIF5BO60841 1220 aaKnown RBP10.04□□□□□ -0.8
CHD4-204ENST00000535810 CDKL5O76039 1030 aa10.04□□□□□ -0.8
CHD4-204ENST00000535810 ATG7O95352 703 aa10.04□□□□□ -0.8
CHD4-204ENST00000535810 CA3P07451 260 aa10.04□□□□□ -0.8
CHD4-204ENST00000535810 KCNJ6P48051 423 aa10.04□□□□□ -0.8
CHD4-204ENST00000535810 DEFB103AP81534 67 aa10.04□□□□□ -0.8
CHD4-204ENST00000535810 MRPS5P82675 430 aaKnown RBP10.04□□□□□ -0.8
CHD4-204ENST00000535810 PLCB4Q15147 1175 aa10.04□□□□□ -0.8
CHD4-204ENST00000535810 ANKRD1Q15327 319 aa10.04□□□□□ -0.8
CHD4-204ENST00000535810 NPY5RQ15761 445 aa10.04□□□□□ -0.8
CHD4-204ENST00000535810 PRR16Q569H4 304 aa10.04□□□□□ -0.8
CHD4-204ENST00000535810 MARCH8Q5T0T0 291 aa10.04□□□□□ -0.8
CHD4-204ENST00000535810 PPP2R2DQ66LE6 453 aa10.04□□□□□ -0.8
CHD4-204ENST00000535810 PLPPR4Q7Z2D5 763 aa10.04□□□□□ -0.8
CHD4-204ENST00000535810 TMCO2Q7Z6W1 182 aaPredicted RBP10.04□□□□□ -0.8
CHD4-204ENST00000535810 RPAINQ86UA6 219 aa10.04□□□□□ -0.8
CHD4-204ENST00000535810 FAM177A1Q8N128 213 aaPredicted RBP10.04□□□□□ -0.8
CHD4-204ENST00000535810 DAGLBQ8NCG7 672 aa10.04□□□□□ -0.8
CHD4-204ENST00000535810 UIMC1Q96RL1 719 aa10.04□□□□□ -0.8
CHD4-204ENST00000535810 ZNF577Q9BSK1 485 aa10.04□□□□□ -0.8
CHD4-204ENST00000535810 OSBPL7Q9BZF2 842 aa10.04□□□□□ -0.8
CHD4-204ENST00000535810 SLKQ9H2G2 1235 aaPredicted RBP10.04□□□□□ -0.8
CHD4-204ENST00000535810 SLC28A3Q9HAS3 691 aa10.04□□□□□ -0.8
CHD4-204ENST00000535810 PCDHA4Q9UN74 947 aa10.04□□□□□ -0.8
CHD4-204ENST00000535810 HCN4Q9Y3Q4 1203 aa10.04□□□□□ -0.8
CHD4-204ENST00000535810 STK36Q9NRP7 1315 aa10.04□□□□□ -0.8
CHD4-204ENST00000535810 PTPRSQ13332 1948 aa10.03□□□□□ -0.8
CHD4-204ENST00000535810 REV3LO60673 3130 aa10.03□□□□□ -0.8
CHD4-204ENST00000535810 EFCAB14O75071 495 aa10.03□□□□□ -0.8
CHD4-204ENST00000535810 ARHGEF15O94989 841 aa10.03□□□□□ -0.8
CHD4-204ENST00000535810 CTDNEP1O95476 244 aa10.03□□□□□ -0.8
CHD4-204ENST00000535810 INSRRP14616 1297 aa10.03□□□□□ -0.8
CHD4-204ENST00000535810 SLC26A2P50443 739 aa10.03□□□□□ -0.8
CHD4-204ENST00000535810 STAT5BP51692 787 aa10.03□□□□□ -0.8
CHD4-204ENST00000535810 IGBP1P78318 339 aa10.03□□□□□ -0.8
CHD4-204ENST00000535810 IKBKEQ14164 716 aa10.03□□□□□ -0.8
CHD4-204ENST00000535810 PLEKHG4Q58EX7 1191 aa10.03□□□□□ -0.8
CHD4-204ENST00000535810 FAM26DQ5JW98 314 aa10.03□□□□□ -0.8
CHD4-204ENST00000535810 GALNT17Q6IS24 598 aa10.03□□□□□ -0.8
CHD4-204ENST00000535810 ABHD15Q6UXT9 468 aa10.03□□□□□ -0.8
CHD4-204ENST00000535810 CCDC60Q8IWA6 550 aaPredicted RBP10.03□□□□□ -0.8
CHD4-204ENST00000535810 DBF4BQ8NFT6 615 aa10.03□□□□□ -0.8
CHD4-204ENST00000535810 TBCKQ8TEA7 893 aa10.03□□□□□ -0.8
CHD4-204ENST00000535810 KAT6AQ92794 2004 aa10.03□□□□□ -0.8
CHD4-204ENST00000535810 ZBTB10Q96DT7 871 aa10.03□□□□□ -0.8
CHD4-204ENST00000535810 PRDM12Q9H4Q4 367 aa10.03□□□□□ -0.8
CHD4-204ENST00000535810 TBC1D22BQ9NU19 505 aa10.03□□□□□ -0.8
CHD4-204ENST00000535810 THEGQ9P2T0 379 aa10.03□□□□□ -0.8
CHD4-204ENST00000535810 POTEB3A0JP26 581 aa10.02□□□□□ -0.81
CHD4-204ENST00000535810 GRXCR2A6NFK2 248 aa10.02□□□□□ -0.81
CHD4-204ENST00000535810 RRN3P2A6NIE6 340 aa10.02□□□□□ -0.81
CHD4-204ENST00000535810 KIF28PB7ZC32 967 aa10.02□□□□□ -0.81
CHD4-204ENST00000535810 BACH1O14867 736 aa10.02□□□□□ -0.81
CHD4-204ENST00000535810 MSH4O15457 936 aa10.02□□□□□ -0.81
CHD4-204ENST00000535810 DTNBO60941 627 aa10.02□□□□□ -0.81
CHD4-204ENST00000535810 GJB5O95377 273 aa10.02□□□□□ -0.81
CHD4-204ENST00000535810 LARGE1O95461 756 aa10.02□□□□□ -0.81
CHD4-204ENST00000535810 CHRNA1P02708 482 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms