RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 MYO7AQ13402 2215 aa12.31□□□□□ -0.44
CCDC60-202ENST00000535685 COL4A6Q14031 1691 aa12.3□□□□□ -0.44
CCDC60-202ENST00000535685 IGKV6D-21A0A0A0MT36 114 aa12.3□□□□□ -0.44
CCDC60-202ENST00000535685 RRN3P2A6NIE6 340 aa12.3□□□□□ -0.44
CCDC60-202ENST00000535685 TLL1O43897 1013 aa12.3□□□□□ -0.44
CCDC60-202ENST00000535685 ARP10275 920 aa12.3□□□□□ -0.44
CCDC60-202ENST00000535685 PDIA3P30101 505 aaKnown RBP12.3□□□□□ -0.44
CCDC60-202ENST00000535685 CIITAP33076 1130 aa12.3□□□□□ -0.44
CCDC60-202ENST00000535685 SLC26A2P50443 739 aa12.3□□□□□ -0.44
CCDC60-202ENST00000535685 DEFB103AP81534 67 aa12.3□□□□□ -0.44
CCDC60-202ENST00000535685 USP38Q8NB14 1042 aa12.3□□□□□ -0.44
CCDC60-202ENST00000535685 SEPT8Q92599 483 aa12.3□□□□□ -0.44
CCDC60-202ENST00000535685 APBB2Q92870 758 aa12.3□□□□□ -0.44
CCDC60-202ENST00000535685 ZNF274Q96GC6 653 aaPredicted RBP12.3□□□□□ -0.44
CCDC60-202ENST00000535685 SDF4Q9BRK5 362 aa12.3□□□□□ -0.44
CCDC60-202ENST00000535685 PPP4R2Q9NY27 417 aa12.3□□□□□ -0.44
CCDC60-202ENST00000535685 REV3LO60673 3130 aa12.29□□□□□ -0.44
CCDC60-202ENST00000535685 IGLV3-22A0A075B6J6 115 aa12.29□□□□□ -0.44
CCDC60-202ENST00000535685 DHX15O43143 795 aaKnown RBP12.29□□□□□ -0.44
CCDC60-202ENST00000535685 ACTR2P61160 394 aa12.29□□□□□ -0.44
CCDC60-202ENST00000535685 HTRA4P83105 476 aaPredicted RBP12.29□□□□□ -0.44
CCDC60-202ENST00000535685 SP4Q02446 784 aa12.29□□□□□ -0.44
CCDC60-202ENST00000535685 MGAT3Q09327 533 aa12.29□□□□□ -0.44
CCDC60-202ENST00000535685 PPFIA1Q13136 1202 aa12.29□□□□□ -0.44
CCDC60-202ENST00000535685 ITGB3BPQ13352 177 aaPredicted RBP12.29□□□□□ -0.44
CCDC60-202ENST00000535685 TOB2Q14106 344 aaPredicted RBP12.29□□□□□ -0.44
CCDC60-202ENST00000535685 GRIK4Q16099 956 aa12.29□□□□□ -0.44
CCDC60-202ENST00000535685 MARCH8Q5T0T0 291 aa12.29□□□□□ -0.44
CCDC60-202ENST00000535685 RSPH3Q86UC2 560 aa12.29□□□□□ -0.44
CCDC60-202ENST00000535685 REXO1Q8N1G1 1221 aaKnown RBP12.29□□□□□ -0.44
CCDC60-202ENST00000535685 CCDC148Q8NFR7 591 aa12.29□□□□□ -0.44
CCDC60-202ENST00000535685 BICD2Q8TD16 824 aa12.29□□□□□ -0.44
CCDC60-202ENST00000535685 GLG1Q92896 1179 aa12.29□□□□□ -0.44
CCDC60-202ENST00000535685 AZI2Q9H6S1 392 aa12.29□□□□□ -0.44
CCDC60-202ENST00000535685 TMEM260Q9NX78 707 aa12.29□□□□□ -0.44
CCDC60-202ENST00000535685 LMCD1Q9NZU5 365 aa12.29□□□□□ -0.44
CCDC60-202ENST00000535685 NAP1L2Q9ULW6 460 aaPredicted RBP12.29□□□□□ -0.44
CCDC60-202ENST00000535685 CYP46A1Q9Y6A2 500 aa12.29□□□□□ -0.44
CCDC60-202ENST00000535685 SQORQ9Y6N5 450 aa12.29□□□□□ -0.44
CCDC60-202ENST00000535685 RALGAPA2Q2PPJ7 1873 aa12.29□□□□□ -0.44
CCDC60-202ENST00000535685 NLRC5Q86WI3 1866 aa12.29□□□□□ -0.44
CCDC60-202ENST00000535685 FAM86B1E9PN63 330 aa12.28□□□□□ -0.44
CCDC60-202ENST00000535685 ARHGEF15O94989 841 aa12.28□□□□□ -0.44
CCDC60-202ENST00000535685 CHRNA1P02708 482 aa12.28□□□□□ -0.44
CCDC60-202ENST00000535685 AMHP03971 560 aa12.28□□□□□ -0.44
CCDC60-202ENST00000535685 FAM86B2P0C5J1 330 aa12.28□□□□□ -0.44
CCDC60-202ENST00000535685 STAT5BP51692 787 aa12.28□□□□□ -0.44
CCDC60-202ENST00000535685 ERVK-21P61565 698 aa12.28□□□□□ -0.44
CCDC60-202ENST00000535685 SETQ01105 290 aaPredicted RBP12.28□□□□□ -0.44
CCDC60-202ENST00000535685 AKAP17AQ02040 695 aaKnown RBP12.28□□□□□ -0.44
CCDC60-202ENST00000535685 PTGDRQ13258 359 aa12.28□□□□□ -0.44
CCDC60-202ENST00000535685 JAKMIP3Q5VZ66 844 aa12.28□□□□□ -0.44
CCDC60-202ENST00000535685 ABHD15Q6UXT9 468 aa12.28□□□□□ -0.44
CCDC60-202ENST00000535685 PLA2G4DQ86XP0 818 aa12.28□□□□□ -0.44
CCDC60-202ENST00000535685 IL27Q8NEV9 243 aa12.28□□□□□ -0.44
CCDC60-202ENST00000535685 ATXN2LQ8WWM7 1075 aaKnown RBP12.28□□□□□ -0.44
CCDC60-202ENST00000535685 IL17RAQ96F46 866 aa12.28□□□□□ -0.44
CCDC60-202ENST00000535685 PGBD1Q96JS3 809 aa12.28□□□□□ -0.44
CCDC60-202ENST00000535685 COL25A1Q9BXS0 654 aaPredicted RBP12.28□□□□□ -0.44
CCDC60-202ENST00000535685 TUBE1Q9UJT0 475 aa12.28□□□□□ -0.44
CCDC60-202ENST00000535685 INSL6Q9Y581 213 aa12.28□□□□□ -0.44
CCDC60-202ENST00000535685 BDP1A6H8Y1 2624 aa12.27□□□□□ -0.44
CCDC60-202ENST00000535685 VCANP13611 3396 aa12.27□□□□□ -0.44
CCDC60-202ENST00000535685 INSRRP14616 1297 aa12.27□□□□□ -0.45
CCDC60-202ENST00000535685 FECHP22830 423 aa12.27□□□□□ -0.45
CCDC60-202ENST00000535685 ZNF76P36508 570 aa12.27□□□□□ -0.45
CCDC60-202ENST00000535685 USP11P51784 963 aa12.27□□□□□ -0.45
CCDC60-202ENST00000535685 PLCB4Q15147 1175 aa12.27□□□□□ -0.45
CCDC60-202ENST00000535685 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.27□□□□□ -0.45
CCDC60-202ENST00000535685 RUFY4Q6ZNE9 571 aa12.27□□□□□ -0.45
CCDC60-202ENST00000535685 SYMPKQ92797 1274 aaKnown RBP12.27□□□□□ -0.45
CCDC60-202ENST00000535685 PHKBQ93100 1093 aa12.27□□□□□ -0.45
CCDC60-202ENST00000535685 TOP1MTQ969P6 601 aa12.27□□□□□ -0.45
CCDC60-202ENST00000535685 ZBED2Q9BTP6 218 aa12.27□□□□□ -0.45
CCDC60-202ENST00000535685 TBC1D22BQ9NU19 505 aa12.27□□□□□ -0.45
CCDC60-202ENST00000535685 PKD2L1Q9P0L9 805 aa12.27□□□□□ -0.45
CCDC60-202ENST00000535685 PCDHA2Q9Y5H9 948 aa12.27□□□□□ -0.45
CCDC60-202ENST00000535685 MTCH2Q9Y6C9 303 aa12.27□□□□□ -0.45
CCDC60-202ENST00000535685 COL4A4P53420 1690 aaPredicted RBP12.26□□□□□ -0.45
CCDC60-202ENST00000535685 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.26□□□□□ -0.45
CCDC60-202ENST00000535685 LCHNA4D1U4 455 aa12.26□□□□□ -0.45
CCDC60-202ENST00000535685 LINC01553A4QN01 128 aa12.26□□□□□ -0.45
CCDC60-202ENST00000535685 EPOPA6NHQ4 379 aa12.26□□□□□ -0.45
CCDC60-202ENST00000535685 IPO5O00410 1097 aaKnown RBP12.26□□□□□ -0.45
CCDC60-202ENST00000535685 ADAMTS3O15072 1205 aa12.26□□□□□ -0.45
CCDC60-202ENST00000535685 HBP1O60381 514 aa12.26□□□□□ -0.45
CCDC60-202ENST00000535685 LPXNO60711 386 aa12.26□□□□□ -0.45
CCDC60-202ENST00000535685 CCNE2O96020 404 aa12.26□□□□□ -0.45
CCDC60-202ENST00000535685 IGFBP4P22692 258 aa12.26□□□□□ -0.45
CCDC60-202ENST00000535685 MARK3P27448 753 aa12.26□□□□□ -0.45
CCDC60-202ENST00000535685 ANAPC15P60006 121 aa12.26□□□□□ -0.45
CCDC60-202ENST00000535685 TJAP1Q5JTD0 557 aa12.26□□□□□ -0.45
CCDC60-202ENST00000535685 GALNT17Q6IS24 598 aa12.26□□□□□ -0.45
CCDC60-202ENST00000535685 ZNF746Q6NUN9 644 aaPredicted RBP12.26□□□□□ -0.45
CCDC60-202ENST00000535685 TRIM22Q8IYM9 498 aa12.26□□□□□ -0.45
CCDC60-202ENST00000535685 NME8Q8N427 588 aa12.26□□□□□ -0.45
CCDC60-202ENST00000535685 TGS1Q96RS0 853 aaKnown RBP12.26□□□□□ -0.45
CCDC60-202ENST00000535685 SLC26A6Q9BXS9 759 aa12.26□□□□□ -0.45
CCDC60-202ENST00000535685 IFIH1Q9BYX4 1025 aaKnown RBP12.26□□□□□ -0.45
CCDC60-202ENST00000535685 C22orf23Q9BZE7 217 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms