RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 KCNF1Q9H3M0 494 aa6.07□□□□□ -1.44
ECHDC1-223ENST00000534442 ATG3Q9NT62 314 aa6.07□□□□□ -1.44
ECHDC1-223ENST00000534442 GFOD1Q9NXC2 390 aa6.07□□□□□ -1.44
ECHDC1-223ENST00000534442 TPX2Q9ULW0 747 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-223ENST00000534442 ZNF831Q5JPB2 1677 aa6.07□□□□□ -1.44
ECHDC1-223ENST00000534442 NPC1L1Q9UHC9 1359 aa6.06□□□□□ -1.44
ECHDC1-223ENST00000534442 NOP56O00567 594 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-223ENST00000534442 DLX3O60479 287 aa6.06□□□□□ -1.44
ECHDC1-223ENST00000534442 KCNH1O95259 989 aa6.06□□□□□ -1.44
ECHDC1-223ENST00000534442 FAM87AP0C7U9 286 aa6.06□□□□□ -1.44
ECHDC1-223ENST00000534442 ADMP35318 185 aa6.06□□□□□ -1.44
ECHDC1-223ENST00000534442 TCF15Q12870 199 aa6.06□□□□□ -1.44
ECHDC1-223ENST00000534442 FNDC3BQ53EP0 1204 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-223ENST00000534442 TAF7LQ5H9L4 462 aa6.06□□□□□ -1.44
ECHDC1-223ENST00000534442 GTF2IRD2BQ6EKJ0 949 aa6.06□□□□□ -1.44
ECHDC1-223ENST00000534442 GTF2IRD2Q86UP8 949 aa6.06□□□□□ -1.44
ECHDC1-223ENST00000534442 CLEC10AQ8IUN9 316 aa6.06□□□□□ -1.44
ECHDC1-223ENST00000534442 NIM1KQ8IY84 436 aa6.06□□□□□ -1.44
ECHDC1-223ENST00000534442 SHISA5Q8N114 240 aa6.06□□□□□ -1.44
ECHDC1-223ENST00000534442 FIBCD1Q8N539 461 aa6.06□□□□□ -1.44
ECHDC1-223ENST00000534442 DTWD2Q8NBA8 298 aa6.06□□□□□ -1.44
ECHDC1-223ENST00000534442 ZKSCAN4Q969J2 545 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-223ENST00000534442 MFSD3Q96ES6 412 aa6.06□□□□□ -1.44
ECHDC1-223ENST00000534442 HEXIM2Q96MH2 286 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-223ENST00000534442 PSMD1Q99460 953 aa6.06□□□□□ -1.44
ECHDC1-223ENST00000534442 FAM83CQ9BQN1 747 aa6.06□□□□□ -1.44
ECHDC1-223ENST00000534442 IER2Q9BTL4 223 aa6.06□□□□□ -1.44
ECHDC1-223ENST00000534442 NOL6Q9H6R4 1146 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-223ENST00000534442 TMOD3Q9NYL9 352 aa6.06□□□□□ -1.44
ECHDC1-223ENST00000534442 PRR13Q9NZ81 148 aa6.06□□□□□ -1.44
ECHDC1-223ENST00000534442 MINPP1Q9UNW1 487 aa6.06□□□□□ -1.44
ECHDC1-223ENST00000534442 DIS3Q9Y2L1 958 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-223ENST00000534442 SCN7AQ01118 1682 aa6.06□□□□□ -1.44
ECHDC1-223ENST00000534442 MYO18BQ8IUG5 2567 aa6.06□□□□□ -1.44
ECHDC1-223ENST00000534442 ZZEF1O43149 2961 aa6.05□□□□□ -1.44
ECHDC1-223ENST00000534442 A0A087X0B3 334 aa6.05□□□□□ -1.44
ECHDC1-223ENST00000534442 IRS4O14654 1257 aaPredicted RBP6.05□□□□□ -1.44
ECHDC1-223ENST00000534442 CYP27B1O15528 508 aa6.05□□□□□ -1.44
ECHDC1-223ENST00000534442 DHX15O43143 795 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-223ENST00000534442 CAMTA2O94983 1202 aa6.05□□□□□ -1.44
ECHDC1-223ENST00000534442 C6orf222P0C671 652 aaPredicted RBP6.05□□□□□ -1.44
ECHDC1-223ENST00000534442 CYP7A1P22680 504 aa6.05□□□□□ -1.44
ECHDC1-223ENST00000534442 CHRNA4P43681 627 aa6.05□□□□□ -1.44
ECHDC1-223ENST00000534442 ANAPC15P60006 121 aa6.05□□□□□ -1.44
ECHDC1-223ENST00000534442 SUMO1P63165 101 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-223ENST00000534442 CXCL9Q07325 125 aa6.05□□□□□ -1.44
ECHDC1-223ENST00000534442 CYP4F3Q08477 520 aa6.05□□□□□ -1.44
ECHDC1-223ENST00000534442 PPP2R5DQ14738 602 aa6.05□□□□□ -1.44
ECHDC1-223ENST00000534442 SHHQ15465 462 aa6.05□□□□□ -1.44
ECHDC1-223ENST00000534442 NOL9Q5SY16 702 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-223ENST00000534442 PRR5LQ6MZQ0 368 aa6.05□□□□□ -1.44
ECHDC1-223ENST00000534442 THNSL2Q86YJ6 484 aa6.05□□□□□ -1.44
ECHDC1-223ENST00000534442 MRPL4Q9BYD3 311 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-223ENST00000534442 ARHGAP39Q9C0H5 1083 aa6.05□□□□□ -1.44
ECHDC1-223ENST00000534442 CNOT7Q9UIV1 285 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-223ENST00000534442 TRIOO75962 3097 aa6.05□□□□□ -1.44
ECHDC1-223ENST00000534442 CHD9Q3L8U1 2897 aa6.05□□□□□ -1.44
ECHDC1-223ENST00000534442 SNED1Q8TER0 1413 aa6.05□□□□□ -1.44
ECHDC1-223ENST00000534442 FRYQ5TBA9 3013 aa6.05□□□□□ -1.44
ECHDC1-223ENST00000534442 PLXNA3P51805 1871 aa6.05□□□□□ -1.44
ECHDC1-223ENST00000534442 CACNA1HO95180 2353 aa6.04□□□□□ -1.44
ECHDC1-223ENST00000534442 RGPD2P0DJD1 1756 aa6.04□□□□□ -1.44
ECHDC1-223ENST00000534442 DNAJC25-GNG10A0A024R161 153 aa6.04□□□□□ -1.44
ECHDC1-223ENST00000534442 H7C1D1 291 aa6.04□□□□□ -1.44
ECHDC1-223ENST00000534442 SIGLEC6O43699 453 aa6.04□□□□□ -1.44
ECHDC1-223ENST00000534442 VAMP4O75379 141 aa6.04□□□□□ -1.44
ECHDC1-223ENST00000534442 PRAMEF1O95521 474 aa6.04□□□□□ -1.44
ECHDC1-223ENST00000534442 CBX7O95931 251 aa6.04□□□□□ -1.44
ECHDC1-223ENST00000534442 MYCLP1P12525 358 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-223ENST00000534442 SDSP20132 328 aa6.04□□□□□ -1.44
ECHDC1-223ENST00000534442 POU3F3P20264 500 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-223ENST00000534442 EIF5P55010 431 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-223ENST00000534442 GFRA1P56159 465 aa6.04□□□□□ -1.44
ECHDC1-223ENST00000534442 NTRK3Q16288 839 aa6.04□□□□□ -1.44
ECHDC1-223ENST00000534442 TBC1D10BQ4KMP7 808 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-223ENST00000534442 SFRP5Q5T4F7 317 aa6.04□□□□□ -1.44
ECHDC1-223ENST00000534442 POMZP3Q6PJE2 187 aa6.04□□□□□ -1.44
ECHDC1-223ENST00000534442 OGFOD3Q6PK18 319 aa6.04□□□□□ -1.44
ECHDC1-223ENST00000534442 CD163Q86VB7 1156 aa6.04□□□□□ -1.44
ECHDC1-223ENST00000534442 COX4I2Q96KJ9 171 aa6.04□□□□□ -1.44
ECHDC1-223ENST00000534442 ZDHHC15Q96MV8 337 aa6.04□□□□□ -1.44
ECHDC1-223ENST00000534442 IPO9Q96P70 1041 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-223ENST00000534442 NKX2-4Q9H2Z4 354 aa6.04□□□□□ -1.44
ECHDC1-223ENST00000534442 PRDM5Q9NQX1 630 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-223ENST00000534442 COL1A1P02452 1464 aaPredicted RBP6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 CGNL1Q0VF96 1302 aa6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 SHISA3A0PJX4 238 aa6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 HMX2A2RU54 273 aa6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 BLACEA4D250 179 aa6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 PRR23AA6NEV1 266 aa6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 MANSC4A6NHS7 340 aaPredicted RBP6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 RAB11FIP3O75154 756 aa6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 ALADP13716 330 aa6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 CTSKP43235 329 aa6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 INHBEP58166 350 aa6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 UBXN2AP68543 259 aa6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 INSM1Q01101 510 aaPredicted RBP6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 NMIQ13287 307 aaPredicted RBP6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 GRB10Q13322 594 aa6.03□□□□□ -1.44
ECHDC1-223ENST00000534442 TCIRG1Q13488 830 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 173.4 ms