RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 FAM160B1Q5W0V3 765 aa10.13□□□□□ -0.79
COPB1-211ENST00000534234 SWSAP1Q6NVH7 229 aa10.13□□□□□ -0.79
COPB1-211ENST00000534234 BICD2Q8TD16 824 aa10.13□□□□□ -0.79
COPB1-211ENST00000534234 IL17RAQ96F46 866 aa10.13□□□□□ -0.79
COPB1-211ENST00000534234 SAMD11Q96NU1 681 aa10.13□□□□□ -0.79
COPB1-211ENST00000534234 UHRF1Q96T88 793 aaPredicted RBP10.13□□□□□ -0.79
COPB1-211ENST00000534234 ZNF577Q9BSK1 485 aa10.13□□□□□ -0.79
COPB1-211ENST00000534234 SLC26A6Q9BXS9 759 aa10.13□□□□□ -0.79
COPB1-211ENST00000534234 AGO3Q9H9G7 860 aaKnown RBP10.13□□□□□ -0.79
COPB1-211ENST00000534234 NCOA5Q9HCD5 579 aaKnown RBP10.13□□□□□ -0.79
COPB1-211ENST00000534234 TBC1D22BQ9NU19 505 aa10.13□□□□□ -0.79
COPB1-211ENST00000534234 CHD7Q9P2D1 2997 aa10.13□□□□□ -0.79
COPB1-211ENST00000534234 MYH7BA7E2Y1 1941 aa10.12□□□□□ -0.79
COPB1-211ENST00000534234 TRIP12Q14669 1992 aaPredicted RBP10.12□□□□□ -0.79
COPB1-211ENST00000534234 M0QZ92 97 aa10.12□□□□□ -0.79
COPB1-211ENST00000534234 HBP1O60381 514 aa10.12□□□□□ -0.79
COPB1-211ENST00000534234 NEFLP07196 543 aa10.12□□□□□ -0.79
COPB1-211ENST00000534234 KLRC1P26715 233 aa10.12□□□□□ -0.79
COPB1-211ENST00000534234 CD52P31358 61 aa10.12□□□□□ -0.79
COPB1-211ENST00000534234 PRR16Q569H4 304 aa10.12□□□□□ -0.79
COPB1-211ENST00000534234 MIS18BP1Q6P0N0 1132 aa10.12□□□□□ -0.79
COPB1-211ENST00000534234 PDXDC2PQ6P474 469 aa10.12□□□□□ -0.79
COPB1-211ENST00000534234 MTHFD1LQ6UB35 978 aa10.12□□□□□ -0.79
COPB1-211ENST00000534234 TSHZ1Q6ZSZ6 1077 aa10.12□□□□□ -0.79
COPB1-211ENST00000534234 CCDC60Q8IWA6 550 aaPredicted RBP10.12□□□□□ -0.79
COPB1-211ENST00000534234 TMEM192Q8IY95 271 aa10.12□□□□□ -0.79
COPB1-211ENST00000534234 NME8Q8N427 588 aa10.12□□□□□ -0.79
COPB1-211ENST00000534234 FIBCD1Q8N539 461 aa10.12□□□□□ -0.79
COPB1-211ENST00000534234 CCDC148Q8NFR7 591 aa10.12□□□□□ -0.79
COPB1-211ENST00000534234 RASGRP4Q8TDF6 673 aa10.12□□□□□ -0.79
COPB1-211ENST00000534234 ATP8B4Q8TF62 1192 aa10.12□□□□□ -0.79
COPB1-211ENST00000534234 CELF4Q9BZC1 486 aaKnown RBP10.12□□□□□ -0.79
COPB1-211ENST00000534234 ZNF302Q9NR11 478 aa10.12□□□□□ -0.79
COPB1-211ENST00000534234 VPS54Q9P1Q0 977 aa10.12□□□□□ -0.79
COPB1-211ENST00000534234 CYP46A1Q9Y6A2 500 aa10.12□□□□□ -0.79
COPB1-211ENST00000534234 SQORQ9Y6N5 450 aa10.12□□□□□ -0.79
COPB1-211ENST00000534234 NID2Q14112 1375 aa10.12□□□□□ -0.79
COPB1-211ENST00000534234 SMIM35A0A1B0GVV1 85 aa10.11□□□□□ -0.79
COPB1-211ENST00000534234 H3BNC9 293 aa10.11□□□□□ -0.79
COPB1-211ENST00000534234 CIITAP33076 1130 aa10.11□□□□□ -0.79
COPB1-211ENST00000534234 NLRP5P59047 1200 aa10.11□□□□□ -0.79
COPB1-211ENST00000534234 SETQ01105 290 aaPredicted RBP10.11□□□□□ -0.79
COPB1-211ENST00000534234 GPM6BQ13491 265 aa10.11□□□□□ -0.79
COPB1-211ENST00000534234 TOB2Q14106 344 aaPredicted RBP10.11□□□□□ -0.79
COPB1-211ENST00000534234 TRMT1LQ7Z2T5 733 aaKnown RBP10.11□□□□□ -0.79
COPB1-211ENST00000534234 RTN4RL1Q86UN2 441 aaPredicted RBP10.11□□□□□ -0.79
COPB1-211ENST00000534234 LARP6Q9BRS8 491 aaKnown RBP10.11□□□□□ -0.79
COPB1-211ENST00000534234 SH3GLB2Q9NR46 395 aa10.11□□□□□ -0.79
COPB1-211ENST00000534234 PADI3Q9ULW8 664 aa10.11□□□□□ -0.79
COPB1-211ENST00000534234 PCDHA10Q9Y5I2 948 aa10.11□□□□□ -0.79
COPB1-211ENST00000534234 TRPV2Q9Y5S1 764 aa10.11□□□□□ -0.79
COPB1-211ENST00000534234 SPTBN5Q9NRC6 3674 aaKnown RBP10.11□□□□□ -0.79
COPB1-211ENST00000534234 CPLX1O14810 134 aa10.1□□□□□ -0.79
COPB1-211ENST00000534234 ATP4AP20648 1035 aa10.1□□□□□ -0.79
COPB1-211ENST00000534234 USP11P51784 963 aa10.1□□□□□ -0.79
COPB1-211ENST00000534234 KRT76Q01546 638 aa10.1□□□□□ -0.79
COPB1-211ENST00000534234 SSRP1Q08945 709 aaKnown RBP10.1□□□□□ -0.79
COPB1-211ENST00000534234 PTPROQ16827 1216 aa10.1□□□□□ -0.79
COPB1-211ENST00000534234 ZNF484Q5JVG2 852 aa10.1□□□□□ -0.79
COPB1-211ENST00000534234 ZNF746Q6NUN9 644 aaPredicted RBP10.1□□□□□ -0.79
COPB1-211ENST00000534234 CKAP2LQ8IYA6 745 aa10.1□□□□□ -0.79
COPB1-211ENST00000534234 TRIM22Q8IYM9 498 aa10.1□□□□□ -0.79
COPB1-211ENST00000534234 KIAA0319LQ8IZA0 1049 aa10.1□□□□□ -0.79
COPB1-211ENST00000534234 MRPL38Q96DV4 380 aaKnown RBP10.1□□□□□ -0.79
COPB1-211ENST00000534234 ZNF274Q96GC6 653 aaPredicted RBP10.1□□□□□ -0.79
COPB1-211ENST00000534234 NECAB3Q96P71 396 aaPredicted RBP10.1□□□□□ -0.79
COPB1-211ENST00000534234 FTHL17Q9BXU8 183 aa10.1□□□□□ -0.79
COPB1-211ENST00000534234 UPF3BQ9BZI7 483 aaKnown RBP10.1□□□□□ -0.79
COPB1-211ENST00000534234 TM6SF1Q9BZW5 370 aa10.1□□□□□ -0.79
COPB1-211ENST00000534234 TCEAL9Q9UHQ7 104 aa10.1□□□□□ -0.79
COPB1-211ENST00000534234 GINS2Q9Y248 185 aa10.1□□□□□ -0.79
COPB1-211ENST00000534234 SAMM50Q9Y512 469 aa10.1□□□□□ -0.79
COPB1-211ENST00000534234 MAFBQ9Y5Q3 323 aaPredicted RBP10.1□□□□□ -0.79
COPB1-211ENST00000534234 GBF1Q92538 1859 aa10.1□□□□□ -0.79
COPB1-211ENST00000534234 TTC28Q96AY4 2481 aa10.1□□□□□ -0.79
COPB1-211ENST00000534234 IGSF9BQ9UPX0 1349 aa10.1□□□□□ -0.79
COPB1-211ENST00000534234 KDM3AQ9Y4C1 1321 aa10.1□□□□□ -0.79
COPB1-211ENST00000534234 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.09□□□□□ -0.79
COPB1-211ENST00000534234 DGKIO75912 1065 aa10.09□□□□□ -0.79
COPB1-211ENST00000534234 RB1P06400 928 aa10.09□□□□□ -0.79
COPB1-211ENST00000534234 PSAPP07602 524 aa10.09□□□□□ -0.79
COPB1-211ENST00000534234 BMPR1AP36894 532 aa10.09□□□□□ -0.79
COPB1-211ENST00000534234 NFX1Q12986 1120 aaKnown RBP10.09□□□□□ -0.79
COPB1-211ENST00000534234 PAK2Q13177 524 aa10.09□□□□□ -0.79
COPB1-211ENST00000534234 BTG3Q14201 252 aaPredicted RBP10.09□□□□□ -0.79
COPB1-211ENST00000534234 SMAP1Q8IYB5 467 aaPredicted RBP10.09□□□□□ -0.79
COPB1-211ENST00000534234 LINC01599Q8WXQ3 324 aa10.09□□□□□ -0.79
COPB1-211ENST00000534234 BBXQ8WY36 941 aaPredicted RBP10.09□□□□□ -0.79
COPB1-211ENST00000534234 LENG9Q96B70 501 aa10.09□□□□□ -0.79
COPB1-211ENST00000534234 ZNF689Q96CS4 500 aaPredicted RBP10.09□□□□□ -0.79
COPB1-211ENST00000534234 CDHR5Q9HBB8 845 aa10.09□□□□□ -0.79
COPB1-211ENST00000534234 MYO9BQ13459 2157 aa10.09□□□□□ -0.79
COPB1-211ENST00000534234 COL1A2P08123 1366 aa10.09□□□□□ -0.79
COPB1-211ENST00000534234 ZBTB42B2RXF5 422 aa10.09□□□□□ -0.79
COPB1-211ENST00000534234 EDIL3O43854 480 aa10.09□□□□□ -0.79
COPB1-211ENST00000534234 DEXIO95424 95 aa10.09□□□□□ -0.79
COPB1-211ENST00000534234 STK3Q13188 491 aa10.09□□□□□ -0.79
COPB1-211ENST00000534234 TMEM266Q2M3C6 531 aa10.09□□□□□ -0.79
COPB1-211ENST00000534234 CPLX2Q6PUV4 134 aaKnown RBP10.09□□□□□ -0.79
COPB1-211ENST00000534234 CRIPAKQ8N1N5 446 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms