RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 DNAJB3Q8WWF6 145 aa15.09■□□□□ 0.01
CMTM1-219ENST00000533953 FAM20AQ96MK3 541 aa15.09■□□□□ 0.01
CMTM1-219ENST00000533953 MTMR9Q96QG7 549 aa15.09■□□□□ 0.01
CMTM1-219ENST00000533953 NAP1L4Q99733 375 aaKnown RBP15.09■□□□□ 0.01
CMTM1-219ENST00000533953 RGL1Q9NZL6 768 aa15.09■□□□□ 0.01
CMTM1-219ENST00000533953 CXXC1Q9P0U4 656 aaPredicted RBP15.09■□□□□ 0.01
CMTM1-219ENST00000533953 TUBE1Q9UJT0 475 aa15.09■□□□□ 0.01
CMTM1-219ENST00000533953 PCDHB6Q9Y5E3 794 aa15.09■□□□□ 0.01
CMTM1-219ENST00000533953 A0A087WWV3 80 aa15.08■□□□□ 0
CMTM1-219ENST00000533953 ZBTB42B2RXF5 422 aa15.08■□□□□ 0
CMTM1-219ENST00000533953 PITPNM1O00562 1244 aa15.08■□□□□ 0
CMTM1-219ENST00000533953 HBP1O60381 514 aa15.08■□□□□ 0
CMTM1-219ENST00000533953 STBD1O95210 358 aa15.08■□□□□ 0
CMTM1-219ENST00000533953 FGBP02675 491 aa15.08■□□□□ 0
CMTM1-219ENST00000533953 JAK3P52333 1124 aa15.08■□□□□ 0
CMTM1-219ENST00000533953 PRKCEQ02156 737 aa15.08■□□□□ 0
CMTM1-219ENST00000533953 SPIRE1Q08AE8 756 aa15.08■□□□□ 0
CMTM1-219ENST00000533953 TMEM62Q0P6H9 643 aa15.08■□□□□ 0
CMTM1-219ENST00000533953 FAM109BQ6ICB4 259 aaPredicted RBP15.08■□□□□ 0
CMTM1-219ENST00000533953 FERMT3Q86UX7 667 aa15.08■□□□□ 0
CMTM1-219ENST00000533953 CAGE1Q8TC20 777 aa15.08■□□□□ 0
CMTM1-219ENST00000533953 SNX21Q969T3 373 aa15.08■□□□□ 0
CMTM1-219ENST00000533953 RNPC3Q96LT9 517 aaKnown RBP15.08■□□□□ 0
CMTM1-219ENST00000533953 FTOQ9C0B1 505 aaKnown RBP eCLIP15.08■□□□□ 0
CMTM1-219ENST00000533953 TTC12Q9H892 705 aaPredicted RBP15.08■□□□□ 0
CMTM1-219ENST00000533953 WRAP73Q9P2S5 460 aaPredicted RBP15.08■□□□□ 0
CMTM1-219ENST00000533953 KIF3AQ9Y496 699 aa15.08■□□□□ 0
CMTM1-219ENST00000533953 RANBP2P49792 3224 aaKnown RBP15.08■□□□□ 0
CMTM1-219ENST00000533953 MBLAC1A4D2B0 266 aaPredicted RBP15.07■□□□□ 0
CMTM1-219ENST00000533953 RRN3P2A6NIE6 340 aa15.07■□□□□ 0
CMTM1-219ENST00000533953 GRXCR1A8MXD5 290 aa15.07■□□□□ 0
CMTM1-219ENST00000533953 RSPH10B2B2RC85 870 aa15.07■□□□□ 0
CMTM1-219ENST00000533953 ZBTB39O15060 712 aa15.07■□□□□ 0
CMTM1-219ENST00000533953 TBX3O15119 743 aa15.07■□□□□ 0
CMTM1-219ENST00000533953 BAG4O95429 457 aaKnown RBP15.07■□□□□ 0
CMTM1-219ENST00000533953 RSPH10BP0C881 870 aa15.07■□□□□ 0
CMTM1-219ENST00000533953 SFNP31947 248 aa15.07■□□□□ 0
CMTM1-219ENST00000533953 SLC26A2P50443 739 aa15.07■□□□□ 0
CMTM1-219ENST00000533953 FXR1P51114 621 aaKnown RBP eCLIP15.07■□□□□ 0
CMTM1-219ENST00000533953 RBL2Q08999 1139 aa15.07■□□□□ 0
CMTM1-219ENST00000533953 PPP2R5CQ13362 524 aa15.07■□□□□ 0
CMTM1-219ENST00000533953 CTTNQ14247 550 aaKnown RBP15.07■□□□□ 0
CMTM1-219ENST00000533953 MTHFD1LQ6UB35 978 aa15.07■□□□□ 0
CMTM1-219ENST00000533953 CCDC155Q8N6L0 562 aa15.07■□□□□ 0
CMTM1-219ENST00000533953 C4orf32Q8N8J7 132 aa15.07■□□□□ 0
CMTM1-219ENST00000533953 DYDC2Q96IM9 177 aa15.07■□□□□ 0
CMTM1-219ENST00000533953 PCDHA12Q9UN75 941 aa15.07■□□□□ 0
CMTM1-219ENST00000533953 IGSF9BQ9UPX0 1349 aa15.07■□□□□ 0
CMTM1-219ENST00000533953 VPS37CA5D8V6 355 aaPredicted RBP15.06■□□□□ 0
CMTM1-219ENST00000533953 DDX11L8A8MPP1 907 aa15.06■□□□□ 0
CMTM1-219ENST00000533953 CHRNA1P02708 482 aa15.06■□□□□ 0
CMTM1-219ENST00000533953 OATP04181 439 aa15.06■□□□□ 0
CMTM1-219ENST00000533953 CYP4A11Q02928 519 aa15.06■□□□□ 0
CMTM1-219ENST00000533953 SLFN12Q8IYM2 578 aa15.06■□□□□ 0
CMTM1-219ENST00000533953 ZNF579Q8NAF0 562 aaKnown RBP15.06■□□□□ 0
CMTM1-219ENST00000533953 BBXQ8WY36 941 aaPredicted RBP15.06■□□□□ 0
CMTM1-219ENST00000533953 PPP1R16BQ96T49 567 aa15.06■□□□□ 0
CMTM1-219ENST00000533953 NOL7Q9UMY1 257 aaKnown RBP15.06■□□□□ 0
CMTM1-219ENST00000533953 TRIP12Q14669 1992 aaPredicted RBP15.05■□□□□ 0
CMTM1-219ENST00000533953 A0A1W2PPC1 479 aa15.05■□□□□ -0
CMTM1-219ENST00000533953 POTEMA6NI47 508 aa15.05■□□□□ -0
CMTM1-219ENST00000533953 C22orf31O95567 290 aa15.05■□□□□ -0
CMTM1-219ENST00000533953 SYT1P21579 422 aa15.05■□□□□ -0
CMTM1-219ENST00000533953 TECP42680 631 aa15.05■□□□□ -0
CMTM1-219ENST00000533953 EPHA7Q15375 998 aa15.05■□□□□ -0
CMTM1-219ENST00000533953 MTERF2Q49AM1 385 aa15.05■□□□□ -0
CMTM1-219ENST00000533953 ZNF484Q5JVG2 852 aa15.05■□□□□ -0
CMTM1-219ENST00000533953 PLA2G4FQ68DD2 849 aa15.05■□□□□ -0
CMTM1-219ENST00000533953 FAM173BQ6P4H8 233 aa15.05■□□□□ -0
CMTM1-219ENST00000533953 HSCBQ8IWL3 235 aa15.05■□□□□ -0
CMTM1-219ENST00000533953 TPH2Q8IWU9 490 aa15.05■□□□□ -0
CMTM1-219ENST00000533953 RPUSD2Q8IZ73 545 aaKnown RBP15.05■□□□□ -0
CMTM1-219ENST00000533953 RDM1Q8NG50 284 aa15.05■□□□□ -0
CMTM1-219ENST00000533953 ZNF668Q96K58 619 aaPredicted RBP15.05■□□□□ -0
CMTM1-219ENST00000533953 CDHR5Q9HBB8 845 aa15.05■□□□□ -0
CMTM1-219ENST00000533953 NRBP2Q9NSY0 501 aa15.05■□□□□ -0
CMTM1-219ENST00000533953 PCDHA2Q9Y5H9 948 aa15.05■□□□□ -0
CMTM1-219ENST00000533953 ZBBXA8MT70 800 aa15.04■□□□□ -0
CMTM1-219ENST00000533953 OR52Z1P0C646 297 aa15.04■□□□□ -0
CMTM1-219ENST00000533953 QARSP47897 775 aaKnown RBP15.04■□□□□ -0
CMTM1-219ENST00000533953 CLCN3P51790 818 aa15.04■□□□□ -0
CMTM1-219ENST00000533953 NPEPPSP55786 919 aa15.04■□□□□ -0
CMTM1-219ENST00000533953 PSMC5P62195 406 aa15.04■□□□□ -0
CMTM1-219ENST00000533953 PTGDRQ13258 359 aa15.04■□□□□ -0
CMTM1-219ENST00000533953 IL17AQ16552 155 aa15.04■□□□□ -0
CMTM1-219ENST00000533953 PSRC1Q6PGN9 363 aaPredicted RBP15.04■□□□□ -0
CMTM1-219ENST00000533953 ANO5Q75V66 913 aa15.04■□□□□ -0
CMTM1-219ENST00000533953 TMCO2Q7Z6W1 182 aaPredicted RBP15.04■□□□□ -0
CMTM1-219ENST00000533953 KIAA0319LQ8IZA0 1049 aa15.04■□□□□ -0
CMTM1-219ENST00000533953 LRRC71Q8N4P6 559 aa15.04■□□□□ -0
CMTM1-219ENST00000533953 METTL13Q8N6R0 699 aa15.04■□□□□ -0
CMTM1-219ENST00000533953 DBF4BQ8NFT6 615 aa15.04■□□□□ -0
CMTM1-219ENST00000533953 HERVK_113Q902F9 699 aa15.04■□□□□ -0
CMTM1-219ENST00000533953 INTS4Q96HW7 963 aaKnown RBP15.04■□□□□ -0
CMTM1-219ENST00000533953 EIF2AK1Q9BQI3 630 aaKnown RBP15.04■□□□□ -0
CMTM1-219ENST00000533953 SEPT9Q9UHD8 586 aaPredicted RBP15.04■□□□□ -0
CMTM1-219ENST00000533953 CDY2AQ9Y6F7 541 aa15.04■□□□□ -0
CMTM1-219ENST00000533953 SLITRK3O94933 977 aa15.03■□□□□ -0
CMTM1-219ENST00000533953 P4HBP07237 508 aaKnown RBP15.03■□□□□ -0
CMTM1-219ENST00000533953 GHRP10912 638 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms