RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 MXI1P50539 228 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 INHBEP58166 350 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 CTTNQ14247 550 aaKnown RBP12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 MAN2A1Q16706 1144 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 INTS8Q75QN2 995 aaKnown RBP12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 U2AF1L4Q8WU68 220 aaKnown RBP12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 STMN2Q93045 179 aa12.23□□□□□ -0.45
AMBRA1-211ENST00000533727 CLDN3O15551 220 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 PLCG1P19174 1290 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 CAP2P40123 477 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 RPS6KA1Q15418 735 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 USP17L6PQ6QN14 398 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 PADI6Q6TGC4 694 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 SEPT1Q8WYJ6 367 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 PPP1R12CQ9BZL4 782 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 MEIS1O00470 390 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 TSPY1Q01534 308 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 GABBR1Q9UBS5 961 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 GOLGA8CPA6NN73 597 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 VIMP08670 466 aaKnown RBP12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 CCNE1P24864 410 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 HPDP32754 393 aaPredicted RBP12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 AP3M2P53677 418 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 GOLGA8FQ08AF8 430 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 GOLGA8DPQ0D2H9 430 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 ARRDC4Q8NCT1 418 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 LMBRD1Q9NUN5 540 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 A6NJR5 290 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 KIF3CO14782 793 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 H2AFZP0C0S5 128 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 CYP2B6P20813 491 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 STAT5BP51692 787 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 PPFIA1Q13136 1202 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 TSNAXIP1Q2TAA8 658 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 LGSNQ5TDP6 509 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 IER5Q5VY09 327 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 H2AFVQ71UI9 128 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 TBC1D31Q96DN5 1066 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 CNOT6LQ96LI5 555 aaKnown RBP12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 MRPL4Q9BYD3 311 aaKnown RBP12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 TUFT1Q9NNX1 390 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 MYO1AQ9UBC5 1043 aa12.22□□□□□ -0.45
AMBRA1-211ENST00000533727 RRN3P2A6NIE6 340 aa12.21□□□□□ -0.45
AMBRA1-211ENST00000533727 UBE2Q2LH0YL09 131 aa12.21□□□□□ -0.45
AMBRA1-211ENST00000533727 NDUFA8P51970 172 aa12.21□□□□□ -0.45
AMBRA1-211ENST00000533727 XKR3Q5GH77 459 aa12.21□□□□□ -0.45
AMBRA1-211ENST00000533727 PLEKHH3Q7Z736 793 aa12.21□□□□□ -0.45
AMBRA1-211ENST00000533727 SIX6OS1Q8N1H7 587 aa12.21□□□□□ -0.45
AMBRA1-211ENST00000533727 EXOC4Q96A65 974 aa12.21□□□□□ -0.45
AMBRA1-211ENST00000533727 GLT1D1Q96MS3 346 aa12.21□□□□□ -0.45
AMBRA1-211ENST00000533727 IFIH1Q9BYX4 1025 aaKnown RBP12.21□□□□□ -0.45
AMBRA1-211ENST00000533727 SMIM23A6NLE4 172 aa12.21□□□□□ -0.45
AMBRA1-211ENST00000533727 ASAP2O43150 1006 aa12.21□□□□□ -0.45
AMBRA1-211ENST00000533727 C6orf222P0C671 652 aaPredicted RBP12.21□□□□□ -0.45
AMBRA1-211ENST00000533727 PEX3P56589 373 aa12.21□□□□□ -0.45
AMBRA1-211ENST00000533727 RASSF7Q02833 373 aa12.21□□□□□ -0.45
AMBRA1-211ENST00000533727 BAATQ14032 418 aaPredicted RBP12.21□□□□□ -0.45
AMBRA1-211ENST00000533727 ZNF667Q5HYK9 610 aa12.21□□□□□ -0.45
AMBRA1-211ENST00000533727 ZBTB33Q86T24 672 aa12.21□□□□□ -0.45
AMBRA1-211ENST00000533727 CCDC63Q8NA47 563 aa12.21□□□□□ -0.45
AMBRA1-211ENST00000533727 RDM1Q8NG50 284 aa12.21□□□□□ -0.45
AMBRA1-211ENST00000533727 RNF139Q8WU17 664 aa12.21□□□□□ -0.45
AMBRA1-211ENST00000533727 FHDC1Q9C0D6 1143 aaPredicted RBP12.21□□□□□ -0.45
AMBRA1-211ENST00000533727 ANAPC4Q9UJX5 808 aa12.21□□□□□ -0.45
AMBRA1-211ENST00000533727 PRR12Q9ULL5 1215 aa12.21□□□□□ -0.45
AMBRA1-211ENST00000533727 PVALEFA0A1B0GWK0 134 aa12.21□□□□□ -0.46
AMBRA1-211ENST00000533727 THAP12O43422 761 aa12.21□□□□□ -0.46
AMBRA1-211ENST00000533727 NOL3O60936 208 aaKnown RBP12.21□□□□□ -0.46
AMBRA1-211ENST00000533727 RASA1P20936 1047 aa12.21□□□□□ -0.46
AMBRA1-211ENST00000533727 XPAP23025 273 aaPredicted RBP12.21□□□□□ -0.46
AMBRA1-211ENST00000533727 GCKP35557 465 aa12.21□□□□□ -0.46
AMBRA1-211ENST00000533727 LAMC2Q13753 1193 aa12.21□□□□□ -0.46
AMBRA1-211ENST00000533727 SWSAP1Q6NVH7 229 aa12.21□□□□□ -0.46
AMBRA1-211ENST00000533727 UNC13DQ70J99 1090 aa12.21□□□□□ -0.46
AMBRA1-211ENST00000533727 RAB3IL1Q8TBN0 382 aa12.21□□□□□ -0.46
AMBRA1-211ENST00000533727 LCMT1Q9UIC8 334 aa12.21□□□□□ -0.46
AMBRA1-211ENST00000533727 ODF2LQ9ULJ1 636 aa12.21□□□□□ -0.46
AMBRA1-211ENST00000533727 EIF3CLB5ME19 914 aaKnown RBP12.21□□□□□ -0.46
AMBRA1-211ENST00000533727 TRAPPC3O43617 180 aa12.21□□□□□ -0.46
AMBRA1-211ENST00000533727 IFRD2Q12894 506 aaPredicted RBP12.21□□□□□ -0.46
AMBRA1-211ENST00000533727 ZNF568Q3ZCX4 644 aa12.21□□□□□ -0.46
AMBRA1-211ENST00000533727 EIF3CQ99613 913 aaKnown RBP12.21□□□□□ -0.46
AMBRA1-211ENST00000533727 KCNK9Q9NPC2 374 aa12.21□□□□□ -0.46
AMBRA1-211ENST00000533727 PRDM5Q9NQX1 630 aaPredicted RBP12.21□□□□□ -0.46
AMBRA1-211ENST00000533727 KPNA6O60684 536 aa12.2□□□□□ -0.46
AMBRA1-211ENST00000533727 BFSP1Q12934 665 aa12.2□□□□□ -0.46
AMBRA1-211ENST00000533727 RINT1Q6NUQ1 792 aa12.2□□□□□ -0.46
AMBRA1-211ENST00000533727 SCYL2Q6P3W7 929 aa12.2□□□□□ -0.46
AMBRA1-211ENST00000533727 CCDC89Q8N998 374 aa12.2□□□□□ -0.46
AMBRA1-211ENST00000533727 GRK7Q8WTQ7 553 aa12.2□□□□□ -0.46
AMBRA1-211ENST00000533727 GGPS1O95749 300 aa12.2□□□□□ -0.46
AMBRA1-211ENST00000533727 NR3C2P08235 984 aa12.2□□□□□ -0.46
AMBRA1-211ENST00000533727 CCDC38Q502W7 563 aa12.2□□□□□ -0.46
AMBRA1-211ENST00000533727 VCXQ9H320 206 aa12.2□□□□□ -0.46
AMBRA1-211ENST00000533727 RRAGCQ9HB90 399 aa12.2□□□□□ -0.46
AMBRA1-211ENST00000533727 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.2□□□□□ -0.46
AMBRA1-211ENST00000533727 UTP11Q9Y3A2 253 aaKnown RBP12.2□□□□□ -0.46
AMBRA1-211ENST00000533727 PCDHA5Q9Y5H7 936 aa12.2□□□□□ -0.46
AMBRA1-211ENST00000533727 NMT2O60551 498 aa12.2□□□□□ -0.46
AMBRA1-211ENST00000533727 HUS1O60921 280 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms