RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 IL27Q8NEV9 243 aa17.53■□□□□ 0.4
CPSF1-211ENST00000533492 TRAPPC12Q8WVT3 735 aa17.53■□□□□ 0.4
CPSF1-211ENST00000533492 ZBTB10Q96DT7 871 aa17.53■□□□□ 0.4
CPSF1-211ENST00000533492 ZNF302Q9NR11 478 aa17.53■□□□□ 0.4
CPSF1-211ENST00000533492 PCDHA2Q9Y5H9 948 aa17.53■□□□□ 0.4
CPSF1-211ENST00000533492 IGKV6D-21A0A0A0MT36 114 aa17.52■□□□□ 0.4
CPSF1-211ENST00000533492 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.52■□□□□ 0.4
CPSF1-211ENST00000533492 DHX15O43143 795 aaKnown RBP17.52■□□□□ 0.4
CPSF1-211ENST00000533492 HBP1O60381 514 aa17.52■□□□□ 0.4
CPSF1-211ENST00000533492 DEXIO95424 95 aa17.52■□□□□ 0.4
CPSF1-211ENST00000533492 CIITAP33076 1130 aa17.52■□□□□ 0.4
CPSF1-211ENST00000533492 HTRA4P83105 476 aaPredicted RBP17.52■□□□□ 0.4
CPSF1-211ENST00000533492 LPIN1Q14693 890 aa17.52■□□□□ 0.4
CPSF1-211ENST00000533492 SWSAP1Q6NVH7 229 aa17.52■□□□□ 0.4
CPSF1-211ENST00000533492 CKAP2LQ8IYA6 745 aa17.52■□□□□ 0.4
CPSF1-211ENST00000533492 ASB2Q96Q27 587 aa17.52■□□□□ 0.4
CPSF1-211ENST00000533492 SUGCTQ9HAC7 445 aa17.52■□□□□ 0.4
CPSF1-211ENST00000533492 KLRC1P26715 233 aa17.51■□□□□ 0.39
CPSF1-211ENST00000533492 USP11P51784 963 aa17.51■□□□□ 0.39
CPSF1-211ENST00000533492 KRT76Q01546 638 aa17.51■□□□□ 0.39
CPSF1-211ENST00000533492 TMEM62Q0P6H9 643 aa17.51■□□□□ 0.39
CPSF1-211ENST00000533492 FBXO47Q5MNV8 452 aa17.51■□□□□ 0.39
CPSF1-211ENST00000533492 ZNF746Q6NUN9 644 aaPredicted RBP17.51■□□□□ 0.39
CPSF1-211ENST00000533492 MTHFD1LQ6UB35 978 aa17.51■□□□□ 0.39
CPSF1-211ENST00000533492 TSHZ1Q6ZSZ6 1077 aa17.51■□□□□ 0.39
CPSF1-211ENST00000533492 CCDC60Q8IWA6 550 aaPredicted RBP17.51■□□□□ 0.39
CPSF1-211ENST00000533492 NME8Q8N427 588 aa17.51■□□□□ 0.39
CPSF1-211ENST00000533492 ATP8B4Q8TF62 1192 aa17.51■□□□□ 0.39
CPSF1-211ENST00000533492 GDPD5Q8WTR4 605 aa17.51■□□□□ 0.39
CPSF1-211ENST00000533492 C22orf23Q9BZE7 217 aa17.51■□□□□ 0.39
CPSF1-211ENST00000533492 LMCD1Q9NZU5 365 aa17.51■□□□□ 0.39
CPSF1-211ENST00000533492 SAMM50Q9Y512 469 aa17.51■□□□□ 0.39
CPSF1-211ENST00000533492 TRPV2Q9Y5S1 764 aa17.51■□□□□ 0.39
CPSF1-211ENST00000533492 TRANK1O15050 2925 aa17.5■□□□□ 0.39
CPSF1-211ENST00000533492 SMIM35A0A1B0GVV1 85 aa17.5■□□□□ 0.39
CPSF1-211ENST00000533492 LPXNO60711 386 aa17.5■□□□□ 0.39
CPSF1-211ENST00000533492 PSAPP07602 524 aa17.5■□□□□ 0.39
CPSF1-211ENST00000533492 AAK1Q2M2I8 961 aa17.5■□□□□ 0.39
CPSF1-211ENST00000533492 ZNF484Q5JVG2 852 aa17.5■□□□□ 0.39
CPSF1-211ENST00000533492 TRMT1LQ7Z2T5 733 aaKnown RBP17.5■□□□□ 0.39
CPSF1-211ENST00000533492 SMAP1Q8IYB5 467 aaPredicted RBP17.5■□□□□ 0.39
CPSF1-211ENST00000533492 FBXO22Q8NEZ5 403 aa17.5■□□□□ 0.39
CPSF1-211ENST00000533492 SP7Q8TDD2 431 aaPredicted RBP17.5■□□□□ 0.39
CPSF1-211ENST00000533492 C17orf80Q9BSJ5 609 aa17.5■□□□□ 0.39
CPSF1-211ENST00000533492 PCDHA4Q9UN74 947 aa17.5■□□□□ 0.39
CPSF1-211ENST00000533492 PCDHA10Q9Y5I2 948 aa17.5■□□□□ 0.39
CPSF1-211ENST00000533492 SQORQ9Y6N5 450 aa17.5■□□□□ 0.39
CPSF1-211ENST00000533492 ENPP3O14638 875 aa17.49■□□□□ 0.39
CPSF1-211ENST00000533492 CD52P31358 61 aa17.49■□□□□ 0.39
CPSF1-211ENST00000533492 IL17RAQ96F46 866 aa17.49■□□□□ 0.39
CPSF1-211ENST00000533492 SAMD11Q96NU1 681 aa17.49■□□□□ 0.39
CPSF1-211ENST00000533492 CELF4Q9BZC1 486 aaKnown RBP17.49■□□□□ 0.39
CPSF1-211ENST00000533492 AGO3Q9H9G7 860 aaKnown RBP17.49■□□□□ 0.39
CPSF1-211ENST00000533492 MYH9P35579 1960 aaKnown RBP17.48■□□□□ 0.39
CPSF1-211ENST00000533492 CDKL5O76039 1030 aa17.48■□□□□ 0.39
CPSF1-211ENST00000533492 GALNT17Q6IS24 598 aa17.48■□□□□ 0.39
CPSF1-211ENST00000533492 BLIDQ8IZY5 108 aa17.48■□□□□ 0.39
CPSF1-211ENST00000533492 TBCKQ8TEA7 893 aa17.48■□□□□ 0.39
CPSF1-211ENST00000533492 BBXQ8WY36 941 aaPredicted RBP17.48■□□□□ 0.39
CPSF1-211ENST00000533492 FTHL17Q9BXU8 183 aa17.48■□□□□ 0.39
CPSF1-211ENST00000533492 SLKQ9H2G2 1235 aaPredicted RBP17.48■□□□□ 0.39
CPSF1-211ENST00000533492 GABBR1Q9UBS5 961 aa17.48■□□□□ 0.39
CPSF1-211ENST00000533492 COG5Q9UP83 839 aa17.48■□□□□ 0.39
CPSF1-211ENST00000533492 GINS2Q9Y248 185 aa17.48■□□□□ 0.39
CPSF1-211ENST00000533492 MAFBQ9Y5Q3 323 aaPredicted RBP17.48■□□□□ 0.39
CPSF1-211ENST00000533492 COL1A2P08123 1366 aa17.48■□□□□ 0.39
CPSF1-211ENST00000533492 WDR64B1ANS9 1081 aa17.47■□□□□ 0.39
CPSF1-211ENST00000533492 MSH4O15457 936 aa17.47■□□□□ 0.39
CPSF1-211ENST00000533492 GAS7O60861 476 aa17.47■□□□□ 0.39
CPSF1-211ENST00000533492 ATP4AP20648 1035 aa17.47■□□□□ 0.39
CPSF1-211ENST00000533492 PAK2Q13177 524 aa17.47■□□□□ 0.39
CPSF1-211ENST00000533492 EPC2Q52LR7 807 aa17.47■□□□□ 0.39
CPSF1-211ENST00000533492 FAM177A1Q8N128 213 aaPredicted RBP17.47■□□□□ 0.39
CPSF1-211ENST00000533492 FIBCD1Q8N539 461 aa17.47■□□□□ 0.39
CPSF1-211ENST00000533492 LENG9Q96B70 501 aa17.47■□□□□ 0.39
CPSF1-211ENST00000533492 PADI3Q9ULW8 664 aa17.47■□□□□ 0.39
CPSF1-211ENST00000533492 CEP131Q9UPN4 1083 aa17.47■□□□□ 0.39
CPSF1-211ENST00000533492 SIP14410 1827 aa17.47■□□□□ 0.39
CPSF1-211ENST00000533492 EIF5BO60841 1220 aaKnown RBP17.46■□□□□ 0.39
CPSF1-211ENST00000533492 XBP1P17861 261 aa17.46■□□□□ 0.39
CPSF1-211ENST00000533492 ANAPC15P60006 121 aa17.46■□□□□ 0.39
CPSF1-211ENST00000533492 TFF2Q03403 129 aa17.46■□□□□ 0.39
CPSF1-211ENST00000533492 SCRN1Q12765 414 aa17.46■□□□□ 0.39
CPSF1-211ENST00000533492 NFX1Q12986 1120 aaKnown RBP17.46■□□□□ 0.39
CPSF1-211ENST00000533492 ANKRD1Q15327 319 aa17.46■□□□□ 0.39
CPSF1-211ENST00000533492 PTPROQ16827 1216 aa17.46■□□□□ 0.39
CPSF1-211ENST00000533492 TMEM192Q8IY95 271 aa17.46■□□□□ 0.39
CPSF1-211ENST00000533492 METTL13Q8N6R0 699 aa17.46■□□□□ 0.39
CPSF1-211ENST00000533492 HLA-CQ95604 372 aa17.46■□□□□ 0.39
CPSF1-211ENST00000533492 FAM167AQ96KS9 214 aa17.46■□□□□ 0.39
CPSF1-211ENST00000533492 AIFM3Q96NN9 605 aa17.46■□□□□ 0.39
CPSF1-211ENST00000533492 RIT2Q99578 217 aa17.46■□□□□ 0.39
CPSF1-211ENST00000533492 TEKT3Q9BXF9 490 aa17.46■□□□□ 0.39
CPSF1-211ENST00000533492 DISC1Q9NRI5 854 aa17.46■□□□□ 0.39
CPSF1-211ENST00000533492 IGSF9BQ9UPX0 1349 aa17.46■□□□□ 0.38
CPSF1-211ENST00000533492 KDM3AQ9Y4C1 1321 aa17.46■□□□□ 0.38
CPSF1-211ENST00000533492 VCANP13611 3396 aa17.45■□□□□ 0.38
CPSF1-211ENST00000533492 EVPLQ92817 2033 aa17.45■□□□□ 0.38
CPSF1-211ENST00000533492 CHMP2AO43633 222 aa17.45■□□□□ 0.38
CPSF1-211ENST00000533492 EDIL3O43854 480 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms