RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 ZNF165P49910 485 aa17.78■□□□□ 0.44
TRIM3-213ENST00000533309 EHHADHQ08426 723 aa17.78■□□□□ 0.44
TRIM3-213ENST00000533309 RINT1Q6NUQ1 792 aa17.78■□□□□ 0.44
TRIM3-213ENST00000533309 UNC13DQ70J99 1090 aa17.78■□□□□ 0.44
TRIM3-213ENST00000533309 DHX37Q8IY37 1157 aaKnown RBP17.78■□□□□ 0.44
TRIM3-213ENST00000533309 ATP6V0A1Q93050 837 aa17.78■□□□□ 0.44
TRIM3-213ENST00000533309 CBX8Q9HC52 389 aa17.78■□□□□ 0.44
TRIM3-213ENST00000533309 RMND1Q9NWS8 449 aa17.78■□□□□ 0.44
TRIM3-213ENST00000533309 DBR1Q9UK59 544 aaKnown RBP17.78■□□□□ 0.44
TRIM3-213ENST00000533309 MAFBQ9Y5Q3 323 aaPredicted RBP17.78■□□□□ 0.44
TRIM3-213ENST00000533309 PVALEFA0A1B0GWK0 134 aa17.77■□□□□ 0.44
TRIM3-213ENST00000533309 TMEM150BA6NC51 233 aa17.77■□□□□ 0.44
TRIM3-213ENST00000533309 CAVIN2O95810 425 aa17.77■□□□□ 0.44
TRIM3-213ENST00000533309 ZNF865P0CJ78 1059 aaPredicted RBP17.77■□□□□ 0.44
TRIM3-213ENST00000533309 SMPD1P17405 629 aa17.77■□□□□ 0.44
TRIM3-213ENST00000533309 TCF7P36402 384 aaPredicted RBP17.77■□□□□ 0.44
TRIM3-213ENST00000533309 FLT3LGP49771 235 aa17.77■□□□□ 0.44
TRIM3-213ENST00000533309 RARRES1P49788 294 aa17.77■□□□□ 0.44
TRIM3-213ENST00000533309 PRKCZQ05513 592 aa17.77■□□□□ 0.44
TRIM3-213ENST00000533309 CCDC144BQ3MJ40 725 aa17.77■□□□□ 0.44
TRIM3-213ENST00000533309 PRAMEF19Q5SWL8 479 aa17.77■□□□□ 0.44
TRIM3-213ENST00000533309 C1orf186Q6ZWK4 172 aa17.77■□□□□ 0.44
TRIM3-213ENST00000533309 SMYD4Q8IYR2 804 aaPredicted RBP17.77■□□□□ 0.44
TRIM3-213ENST00000533309 SEPT1Q8WYJ6 367 aa17.77■□□□□ 0.44
TRIM3-213ENST00000533309 EMID1Q96A84 441 aaPredicted RBP17.77■□□□□ 0.44
TRIM3-213ENST00000533309 SPATA33Q96N06 139 aa17.77■□□□□ 0.44
TRIM3-213ENST00000533309 GRPEL1Q9HAV7 217 aa17.77■□□□□ 0.44
TRIM3-213ENST00000533309 FRMD3A2A2Y4 597 aa17.76■□□□□ 0.43
TRIM3-213ENST00000533309 GPR25O00155 361 aa17.76■□□□□ 0.43
TRIM3-213ENST00000533309 BACH1O14867 736 aa17.76■□□□□ 0.43
TRIM3-213ENST00000533309 XRCC6P12956 609 aaKnown RBP eCLIP17.76■□□□□ 0.43
TRIM3-213ENST00000533309 CD44P16070 742 aaKnown RBP17.76■□□□□ 0.43
TRIM3-213ENST00000533309 ATP4AP20648 1035 aa17.76■□□□□ 0.43
TRIM3-213ENST00000533309 PRKCEQ02156 737 aa17.76■□□□□ 0.43
TRIM3-213ENST00000533309 GIT2Q14161 759 aa17.76■□□□□ 0.43
TRIM3-213ENST00000533309 IQCB1Q15051 598 aa17.76■□□□□ 0.43
TRIM3-213ENST00000533309 DUSP28Q4G0W2 176 aa17.76■□□□□ 0.43
TRIM3-213ENST00000533309 ZNF658Q5TYW1 1059 aaPredicted RBP17.76■□□□□ 0.43
TRIM3-213ENST00000533309 ANO5Q75V66 913 aa17.76■□□□□ 0.43
TRIM3-213ENST00000533309 MLKLQ8NB16 471 aa17.76■□□□□ 0.43
TRIM3-213ENST00000533309 REEP2Q9BRK0 252 aa17.76■□□□□ 0.43
TRIM3-213ENST00000533309 ZNF302Q9NR11 478 aa17.76■□□□□ 0.43
TRIM3-213ENST00000533309 SAGE1Q9NXZ1 904 aa17.76■□□□□ 0.43
TRIM3-213ENST00000533309 GDAQ9Y2T3 454 aa17.76■□□□□ 0.43
TRIM3-213ENST00000533309 LGR5O75473 907 aa17.76■□□□□ 0.43
TRIM3-213ENST00000533309 GH1P01241 217 aa17.76■□□□□ 0.43
TRIM3-213ENST00000533309 CACNB1Q02641 598 aaPredicted RBP17.76■□□□□ 0.43
TRIM3-213ENST00000533309 RAD51AP2Q09MP3 1159 aa17.76■□□□□ 0.43
TRIM3-213ENST00000533309 KIF22Q14807 665 aa17.76■□□□□ 0.43
TRIM3-213ENST00000533309 UTP14CQ5TAP6 766 aaKnown RBP17.76■□□□□ 0.43
TRIM3-213ENST00000533309 PLA2G4FQ68DD2 849 aa17.76■□□□□ 0.43
TRIM3-213ENST00000533309 IQSEC1Q6DN90 963 aa17.76■□□□□ 0.43
TRIM3-213ENST00000533309 CD99L2Q8TCZ2 262 aa17.76■□□□□ 0.43
TRIM3-213ENST00000533309 AFAP1L1Q8TED9 768 aa17.76■□□□□ 0.43
TRIM3-213ENST00000533309 TRIB2Q92519 343 aa17.76■□□□□ 0.43
TRIM3-213ENST00000533309 BMP2KQ9NSY1 1161 aaPredicted RBP17.76■□□□□ 0.43
TRIM3-213ENST00000533309 ANKEF1Q9NU02 776 aa17.76■□□□□ 0.43
TRIM3-213ENST00000533309 EXOC1Q9NV70 894 aa17.76■□□□□ 0.43
TRIM3-213ENST00000533309 EMSYQ7Z589 1322 aa17.75■□□□□ 0.43
TRIM3-213ENST00000533309 ARHGEF35A5YM69 484 aa17.75■□□□□ 0.43
TRIM3-213ENST00000533309 PPP1R3GB7ZBB8 358 aa17.75■□□□□ 0.43
TRIM3-213ENST00000533309 NOP56O00567 594 aaKnown RBP17.75■□□□□ 0.43
TRIM3-213ENST00000533309 DKC1O60832 514 aaKnown RBP eCLIP17.75■□□□□ 0.43
TRIM3-213ENST00000533309 IDEP14735 1019 aa17.75■□□□□ 0.43
TRIM3-213ENST00000533309 HSPA6P17066 643 aa17.75■□□□□ 0.43
TRIM3-213ENST00000533309 LAMC2Q13753 1193 aa17.75■□□□□ 0.43
TRIM3-213ENST00000533309 LUZP1Q86V48 1076 aa17.75■□□□□ 0.43
TRIM3-213ENST00000533309 HPS3Q969F9 1004 aa17.75■□□□□ 0.43
TRIM3-213ENST00000533309 BPIFA3Q9BQP9 254 aa17.75■□□□□ 0.43
TRIM3-213ENST00000533309 SH2D3AQ9BRG2 576 aa17.75■□□□□ 0.43
TRIM3-213ENST00000533309 KCND2Q9NZV8 630 aa17.75■□□□□ 0.43
TRIM3-213ENST00000533309 MRE11P49959 708 aa17.74■□□□□ 0.43
TRIM3-213ENST00000533309 NPEPPSP55786 919 aa17.74■□□□□ 0.43
TRIM3-213ENST00000533309 STK4Q13043 487 aa17.74■□□□□ 0.43
TRIM3-213ENST00000533309 COASYQ13057 564 aa17.74■□□□□ 0.43
TRIM3-213ENST00000533309 PADI6Q6TGC4 694 aa17.74■□□□□ 0.43
TRIM3-213ENST00000533309 TRMT1LQ7Z2T5 733 aaKnown RBP17.74■□□□□ 0.43
TRIM3-213ENST00000533309 TRIM50Q86XT4 487 aa17.74■□□□□ 0.43
TRIM3-213ENST00000533309 DHX40Q8IX18 779 aaKnown RBP17.74■□□□□ 0.43
TRIM3-213ENST00000533309 KIAA0895Q8NCT3 520 aa17.74■□□□□ 0.43
TRIM3-213ENST00000533309 NAT10Q9H0A0 1025 aaKnown RBP17.74■□□□□ 0.43
TRIM3-213ENST00000533309 PANK4Q9NVE7 773 aa17.74■□□□□ 0.43
TRIM3-213ENST00000533309 GNEQ9Y223 722 aaKnown RBP17.74■□□□□ 0.43
TRIM3-213ENST00000533309 RSPH10B2B2RC85 870 aa17.73■□□□□ 0.43
TRIM3-213ENST00000533309 NKRFO15226 690 aaKnown RBP eCLIP17.73■□□□□ 0.43
TRIM3-213ENST00000533309 OATP04181 439 aa17.73■□□□□ 0.43
TRIM3-213ENST00000533309 KRT18P05783 430 aaKnown RBP17.73■□□□□ 0.43
TRIM3-213ENST00000533309 RSPH10BP0C881 870 aa17.73■□□□□ 0.43
TRIM3-213ENST00000533309 GUCY2CP25092 1073 aa17.73■□□□□ 0.43
TRIM3-213ENST00000533309 STAT5BP51692 787 aa17.73■□□□□ 0.43
TRIM3-213ENST00000533309 TNFAIP2Q03169 654 aa17.73■□□□□ 0.43
TRIM3-213ENST00000533309 XKR9Q5GH70 373 aa17.73■□□□□ 0.43
TRIM3-213ENST00000533309 XKR3Q5GH77 459 aa17.73■□□□□ 0.43
TRIM3-213ENST00000533309 FAM160B1Q5W0V3 765 aa17.73■□□□□ 0.43
TRIM3-213ENST00000533309 TRPV1Q8NER1 839 aa17.73■□□□□ 0.43
TRIM3-213ENST00000533309 PPTC7Q8NI37 304 aa17.73■□□□□ 0.43
TRIM3-213ENST00000533309 AFG1LQ8WV93 481 aa17.73■□□□□ 0.43
TRIM3-213ENST00000533309 CCDC47Q96A33 483 aaKnown RBP17.73■□□□□ 0.43
TRIM3-213ENST00000533309 MED15Q96RN5 788 aa17.73■□□□□ 0.43
TRIM3-213ENST00000533309 SRRDQ9UH36 339 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms