RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 AMHP03971 560 aa18.82■□□□□ 0.6
PKP3-209ENST00000533069 CA3P07451 260 aa18.82■□□□□ 0.6
PKP3-209ENST00000533069 MYOGP15173 224 aa18.82■□□□□ 0.6
PKP3-209ENST00000533069 SFNP31947 248 aa18.82■□□□□ 0.6
PKP3-209ENST00000533069 JAK3P52333 1124 aa18.82■□□□□ 0.6
PKP3-209ENST00000533069 DEFB103AP81534 67 aa18.82■□□□□ 0.6
PKP3-209ENST00000533069 MGAT3Q09327 533 aa18.82■□□□□ 0.6
PKP3-209ENST00000533069 MKRN4PQ13434 485 aaPredicted RBP18.82■□□□□ 0.6
PKP3-209ENST00000533069 ZNF484Q5JVG2 852 aa18.82■□□□□ 0.6
PKP3-209ENST00000533069 NSUN7Q8NE18 718 aaKnown RBP18.82■□□□□ 0.6
PKP3-209ENST00000533069 DNAJB3Q8WWF6 145 aa18.82■□□□□ 0.6
PKP3-209ENST00000533069 BBXQ8WY36 941 aaPredicted RBP18.82■□□□□ 0.6
PKP3-209ENST00000533069 GAS2L1Q99501 681 aaPredicted RBP18.82■□□□□ 0.6
PKP3-209ENST00000533069 NAP1L4Q99733 375 aaKnown RBP18.82■□□□□ 0.6
PKP3-209ENST00000533069 BRMS1Q9HCU9 246 aa18.82■□□□□ 0.6
PKP3-209ENST00000533069 LIMCH1Q9UPQ0 1083 aa18.82■□□□□ 0.6
PKP3-209ENST00000533069 COL6A3P12111 3177 aa18.82■□□□□ 0.6
PKP3-209ENST00000533069 IGSF9BQ9UPX0 1349 aa18.81■□□□□ 0.6
PKP3-209ENST00000533069 SMIM35A0A1B0GVV1 85 aa18.81■□□□□ 0.6
PKP3-209ENST00000533069 TLL1O43897 1013 aa18.81■□□□□ 0.6
PKP3-209ENST00000533069 CHRNA1P02708 482 aa18.81■□□□□ 0.6
PKP3-209ENST00000533069 FDPSP14324 419 aaKnown RBP18.81■□□□□ 0.6
PKP3-209ENST00000533069 GCFC2P16383 781 aaKnown RBP18.81■□□□□ 0.6
PKP3-209ENST00000533069 MCM2P49736 904 aa18.81■□□□□ 0.6
PKP3-209ENST00000533069 MRPS6P82932 125 aaKnown RBP18.81■□□□□ 0.6
PKP3-209ENST00000533069 INF2Q27J81 1249 aa18.81■□□□□ 0.6
PKP3-209ENST00000533069 IER5Q5VY09 327 aa18.81■□□□□ 0.6
PKP3-209ENST00000533069 MTHFD1LQ6UB35 978 aa18.81■□□□□ 0.6
PKP3-209ENST00000533069 NEK8Q86SG6 692 aa18.81■□□□□ 0.6
PKP3-209ENST00000533069 CKAP2LQ8IYA6 745 aa18.81■□□□□ 0.6
PKP3-209ENST00000533069 RDM1Q8NG50 284 aa18.81■□□□□ 0.6
PKP3-209ENST00000533069 TRAPPC12Q8WVT3 735 aa18.81■□□□□ 0.6
PKP3-209ENST00000533069 FAM167AQ96KS9 214 aa18.81■□□□□ 0.6
PKP3-209ENST00000533069 ZBED2Q9BTP6 218 aa18.81■□□□□ 0.6
PKP3-209ENST00000533069 IFIH1Q9BYX4 1025 aaKnown RBP18.81■□□□□ 0.6
PKP3-209ENST00000533069 FAM49AQ9H0Q0 323 aaPredicted RBP18.81■□□□□ 0.6
PKP3-209ENST00000533069 DISC1Q9NRI5 854 aa18.81■□□□□ 0.6
PKP3-209ENST00000533069 DDX25Q9UHL0 483 aaKnown RBP18.81■□□□□ 0.6
PKP3-209ENST00000533069 M0QZ92 97 aa18.8■□□□□ 0.6
PKP3-209ENST00000533069 GJB5O95377 273 aa18.8■□□□□ 0.6
PKP3-209ENST00000533069 NME8Q8N427 588 aa18.8■□□□□ 0.6
PKP3-209ENST00000533069 MAFAQ8NHW3 353 aaPredicted RBP18.8■□□□□ 0.6
PKP3-209ENST00000533069 RAD9AQ99638 391 aa18.8■□□□□ 0.6
PKP3-209ENST00000533069 KIF2CQ99661 725 aa18.8■□□□□ 0.6
PKP3-209ENST00000533069 PRDM12Q9H4Q4 367 aa18.8■□□□□ 0.6
PKP3-209ENST00000533069 GABBR1Q9UBS5 961 aa18.8■□□□□ 0.6
PKP3-209ENST00000533069 CEP131Q9UPN4 1083 aa18.8■□□□□ 0.6
PKP3-209ENST00000533069 CDY2AQ9Y6F7 541 aa18.8■□□□□ 0.6
PKP3-209ENST00000533069 SQORQ9Y6N5 450 aa18.8■□□□□ 0.6
PKP3-209ENST00000533069 PSMD10O75832 226 aa18.79■□□□□ 0.6
PKP3-209ENST00000533069 GHRP10912 638 aa18.79■□□□□ 0.6
PKP3-209ENST00000533069 KRT2P35908 639 aa18.79■□□□□ 0.6
PKP3-209ENST00000533069 TRIM29Q14134 588 aa18.79■□□□□ 0.6
PKP3-209ENST00000533069 LETM2Q2VYF4 491 aa18.79■□□□□ 0.6
PKP3-209ENST00000533069 PPP4R3AQ6IN85 833 aa18.79■□□□□ 0.6
PKP3-209ENST00000533069 TSHZ1Q6ZSZ6 1077 aa18.79■□□□□ 0.6
PKP3-209ENST00000533069 USP38Q8NB14 1042 aa18.79■□□□□ 0.6
PKP3-209ENST00000533069 ETNPPLQ8TBG4 499 aa18.79■□□□□ 0.6
PKP3-209ENST00000533069 ZBTB10Q96DT7 871 aa18.79■□□□□ 0.6
PKP3-209ENST00000533069 UNC45AQ9H3U1 944 aa18.79■□□□□ 0.6
PKP3-209ENST00000533069 GJB4Q9NTQ9 266 aa18.79■□□□□ 0.6
PKP3-209ENST00000533069 TRPV2Q9Y5S1 764 aa18.79■□□□□ 0.6
PKP3-209ENST00000533069 CDH23Q9H251 3354 aa18.78■□□□□ 0.6
PKP3-209ENST00000533069 CHMP2AO43633 222 aa18.78■□□□□ 0.6
PKP3-209ENST00000533069 JAK2O60674 1132 aa18.78■□□□□ 0.6
PKP3-209ENST00000533069 ATP4AP20648 1035 aa18.78■□□□□ 0.6
PKP3-209ENST00000533069 KLRC1P26715 233 aa18.78■□□□□ 0.6
PKP3-209ENST00000533069 BECN1Q14457 450 aa18.78■□□□□ 0.6
PKP3-209ENST00000533069 LPIN1Q14693 890 aa18.78■□□□□ 0.6
PKP3-209ENST00000533069 FBXO47Q5MNV8 452 aa18.78■□□□□ 0.6
PKP3-209ENST00000533069 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.78■□□□□ 0.6
PKP3-209ENST00000533069 PIK3AP1Q6ZUJ8 805 aa18.78■□□□□ 0.6
PKP3-209ENST00000533069 SLC17A8Q8NDX2 589 aa18.78■□□□□ 0.6
PKP3-209ENST00000533069 OXER1Q8TDS5 423 aa18.78■□□□□ 0.6
PKP3-209ENST00000533069 SNX21Q969T3 373 aa18.78■□□□□ 0.6
PKP3-209ENST00000533069 ZSCAN31Q96LW9 406 aaPredicted RBP18.78■□□□□ 0.6
PKP3-209ENST00000533069 FAM20AQ96MK3 541 aa18.78■□□□□ 0.6
PKP3-209ENST00000533069 LLPHQ9BRT6 129 aaKnown RBP18.78■□□□□ 0.6
PKP3-209ENST00000533069 TRIP12Q14669 1992 aaPredicted RBP18.78■□□□□ 0.6
PKP3-209ENST00000533069 KDM3AQ9Y4C1 1321 aa18.77■□□□□ 0.6
PKP3-209ENST00000533069 ZBTB42B2RXF5 422 aa18.77■□□□□ 0.6
PKP3-209ENST00000533069 DTNBO60941 627 aa18.77■□□□□ 0.6
PKP3-209ENST00000533069 MMP1P03956 469 aa18.77■□□□□ 0.6
PKP3-209ENST00000533069 TAP1Q03518 808 aa18.77■□□□□ 0.6
PKP3-209ENST00000533069 ST3GAL1Q11201 340 aa18.77■□□□□ 0.6
PKP3-209ENST00000533069 B3GNT9Q6UX72 402 aa18.77■□□□□ 0.6
PKP3-209ENST00000533069 FAM43BQ6ZT52 329 aaPredicted RBP18.77■□□□□ 0.6
PKP3-209ENST00000533069 MIER3Q7Z3K6 550 aa18.77■□□□□ 0.6
PKP3-209ENST00000533069 TMCO2Q7Z6W1 182 aaPredicted RBP18.77■□□□□ 0.6
PKP3-209ENST00000533069 MYOCDQ8IZQ8 938 aa18.77■□□□□ 0.6
PKP3-209ENST00000533069 OSBPL7Q9BZF2 842 aa18.77■□□□□ 0.6
PKP3-209ENST00000533069 SH2B1Q9NRF2 756 aaPredicted RBP18.77■□□□□ 0.6
PKP3-209ENST00000533069 NRBP2Q9NSY0 501 aa18.77■□□□□ 0.6
PKP3-209ENST00000533069 TET1Q8NFU7 2136 aa18.77■□□□□ 0.6
PKP3-209ENST00000533069 TBX3O15119 743 aa18.76■□□□□ 0.59
PKP3-209ENST00000533069 SLC37A4O43826 429 aa18.76■□□□□ 0.59
PKP3-209ENST00000533069 CCNT1O60563 726 aaKnown RBP18.76■□□□□ 0.59
PKP3-209ENST00000533069 C22orf31O95567 290 aa18.76■□□□□ 0.59
PKP3-209ENST00000533069 OATP04181 439 aa18.76■□□□□ 0.59
PKP3-209ENST00000533069 PRKCEQ02156 737 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms