RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 ADAM12O43184 909 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 BAIAP3O94812 1187 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 PTPN11Q06124 597 aaPredicted RBP2.12□□□□□ -2.07
KNL1-211ENST00000533001 CNGB1Q14028 1251 aaPredicted RBP2.12□□□□□ -2.07
KNL1-211ENST00000533001 SYDE2Q5VT97 1194 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 SMC5Q8IY18 1101 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 KIAA0319LQ8IZA0 1049 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 PPTC7Q8NI37 304 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 FAM122AQ96E09 287 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 RIPOR3Q96MK2 946 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 CRISPLD1Q9H336 500 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 MDC1Q14676 2089 aaKnown RBP2.12□□□□□ -2.07
KNL1-211ENST00000533001 SNRNP200O75643 2136 aaKnown RBP2.12□□□□□ -2.07
KNL1-211ENST00000533001 NCOA6Q14686 2063 aaPredicted RBP2.12□□□□□ -2.07
KNL1-211ENST00000533001 A0A0U1RQG5 324 aaPredicted RBP2.12□□□□□ -2.07
KNL1-211ENST00000533001 NARSO43776 548 aaKnown RBP2.12□□□□□ -2.07
KNL1-211ENST00000533001 KCNA5P22460 613 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 BMPR1AP36894 532 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 DMWDQ09019 674 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 SNRNP48Q6IEG0 339 aaKnown RBP2.12□□□□□ -2.07
KNL1-211ENST00000533001 ZNF280BQ86YH2 543 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 BANK1Q8NDB2 785 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 C1orf216Q8TAB5 229 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 FAM227BQ96M60 508 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 ORAI3Q9BRQ5 295 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 KANSL2Q9H9L4 492 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 VTA1Q9NP79 307 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 STARD7Q9NQZ5 370 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 HOXC10Q9NYD6 342 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 USP15Q9Y4E8 981 aaPredicted RBP2.12□□□□□ -2.07
KNL1-211ENST00000533001 ZNF106Q9H2Y7 1883 aaKnown RBP2.12□□□□□ -2.07
KNL1-211ENST00000533001 B4E1Z4 1266 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 CDX4O14627 284 aaPredicted RBP2.12□□□□□ -2.07
KNL1-211ENST00000533001 GDF9O60383 454 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 CFBP00751 764 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 HSP90B1P14625 803 aaKnown RBP2.12□□□□□ -2.07
KNL1-211ENST00000533001 PBX3P40426 434 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 PKN1Q16512 942 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 CAVIN4Q5BKX8 364 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 SLC9C2Q5TAH2 1124 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 NAA16Q6N069 864 aaPredicted RBP2.12□□□□□ -2.07
KNL1-211ENST00000533001 SYMPKQ92797 1274 aaKnown RBP2.12□□□□□ -2.07
KNL1-211ENST00000533001 CASD1Q96PB1 797 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 TAAR1Q96RJ0 339 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 IFT122Q9HBG6 1241 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 H0Y858 1186 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 MBD4O95243 580 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 NEFMP07197 916 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 ICA1Q05084 483 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 LRRFIP1Q32MZ4 808 aaKnown RBP2.11□□□□□ -2.07
KNL1-211ENST00000533001 C2orf27AQ580R0 203 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 XKR4Q5GH76 650 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 TXNDC11Q6PKC3 985 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 CYB5R4Q7L1T6 521 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 TAS1R1Q7RTX1 841 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 LIMS2Q7Z4I7 341 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 MAP4K3Q8IVH8 894 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 C3orf58Q8NDZ4 430 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 AFAP1L1Q8TED9 768 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 TNFRSF25Q93038 417 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 IL1RAPL2Q9NP60 686 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 TLR9Q9NR96 1032 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 TMEM30AQ9NV96 361 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 ZFC3H1O60293 1989 aaKnown RBP2.11□□□□□ -2.07
KNL1-211ENST00000533001 ROS1P08922 2347 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 SVILO95425 2214 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 ADGRA3Q8IWK6 1321 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 ABCA13Q86UQ4 5058 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 C2CD4DB7Z1M9 353 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 E9PSI1 815 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 GTPBP6O43824 516 aaPredicted RBP2.11□□□□□ -2.07
KNL1-211ENST00000533001 GREM1O60565 184 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 FGBP02675 491 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 PFKMP08237 780 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 C6orf222P0C671 652 aaPredicted RBP2.11□□□□□ -2.07
KNL1-211ENST00000533001 CCR2P41597 374 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 PPIGQ13427 754 aaKnown RBP eCLIP2.11□□□□□ -2.07
KNL1-211ENST00000533001 MVPQ14764 893 aaKnown RBP2.11□□□□□ -2.07
KNL1-211ENST00000533001 KIAA0319Q5VV43 1072 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 CCDC129Q6ZRS4 1044 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 IFNL3Q8IZI9 196 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 FBRSL1Q9HCM7 1045 aaKnown RBP2.11□□□□□ -2.07
KNL1-211ENST00000533001 ZSWIM5Q9P217 1185 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 UBIAD1Q9Y5Z9 338 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 PIKFYVEQ9Y2I7 2098 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 TMEM221A6NGB7 291 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 M0R296 226 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 GPAA1O43292 621 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 C22orf31O95567 290 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 HSPD1P10809 573 aaKnown RBP2.11□□□□□ -2.07
KNL1-211ENST00000533001 SLC5A9Q2M3M2 681 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 NAIF1Q69YI7 327 aaPredicted RBP2.11□□□□□ -2.07
KNL1-211ENST00000533001 AGMOQ6ZNB7 445 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 DBX2Q6ZNG2 339 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 ERICH6Q7L0X2 663 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 LRRC8DQ7L1W4 858 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 CCDC105Q8IYK2 499 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 LRRC47Q8N1G4 583 aaKnown RBP2.11□□□□□ -2.07
KNL1-211ENST00000533001 SLC39A11Q8N1S5 342 aa2.11□□□□□ -2.07
KNL1-211ENST00000533001 CHST13Q8NET6 341 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms