RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 GTF2A2P52657 109 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 CCL15Q16663 113 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 PFKFB3Q16875 520 aaPredicted RBP11.59□□□□□ -0.55
COLCA1-203ENST00000532918 CCDC62Q6P9F0 684 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 ARHGAP24Q8N264 748 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 NEDD1Q8NHV4 660 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 UBN1Q9NPG3 1134 aa11.59□□□□□ -0.55
COLCA1-203ENST00000532918 QARSP47897 775 aaKnown RBP11.58□□□□□ -0.56
COLCA1-203ENST00000532918 TSTA3Q13630 321 aaPredicted RBP11.58□□□□□ -0.56
COLCA1-203ENST00000532918 LINC00116Q8NCU8 138 aa11.58□□□□□ -0.56
COLCA1-203ENST00000532918 CCNYQ8ND76 341 aa11.58□□□□□ -0.56
COLCA1-203ENST00000532918 SCYL1Q96KG9 808 aa11.58□□□□□ -0.56
COLCA1-203ENST00000532918 XPO4Q9C0E2 1151 aaKnown RBP11.58□□□□□ -0.56
COLCA1-203ENST00000532918 BHMT2Q9H2M3 363 aa11.58□□□□□ -0.56
COLCA1-203ENST00000532918 SRPRBQ9Y5M8 271 aaKnown RBP11.58□□□□□ -0.56
COLCA1-203ENST00000532918 LAMC1P11047 1609 aa11.58□□□□□ -0.56
COLCA1-203ENST00000532918 UBN2Q6ZU65 1347 aa11.58□□□□□ -0.56
COLCA1-203ENST00000532918 CLIC2O15247 247 aa11.58□□□□□ -0.56
COLCA1-203ENST00000532918 GSTA1P08263 222 aa11.58□□□□□ -0.56
COLCA1-203ENST00000532918 GSTA2P09210 222 aa11.58□□□□□ -0.56
COLCA1-203ENST00000532918 DDIT3P35638 169 aa11.58□□□□□ -0.56
COLCA1-203ENST00000532918 LRRC63Q05C16 580 aa11.58□□□□□ -0.56
COLCA1-203ENST00000532918 MTMR2Q13614 643 aa11.58□□□□□ -0.56
COLCA1-203ENST00000532918 IRAK4Q9NWZ3 460 aa11.58□□□□□ -0.56
COLCA1-203ENST00000532918 PASKQ96RG2 1323 aa11.58□□□□□ -0.56
COLCA1-203ENST00000532918 CLTCQ00610 1675 aaKnown RBP11.58□□□□□ -0.56
COLCA1-203ENST00000532918 GOLGA8SH3BPF8 625 aa11.58□□□□□ -0.56
COLCA1-203ENST00000532918 MCF2LO15068 1137 aa11.58□□□□□ -0.56
COLCA1-203ENST00000532918 MGEA5O60502 916 aa11.58□□□□□ -0.56
COLCA1-203ENST00000532918 GPC3P51654 580 aa11.58□□□□□ -0.56
COLCA1-203ENST00000532918 NDUFA8P51970 172 aa11.58□□□□□ -0.56
COLCA1-203ENST00000532918 KPNA2P52292 529 aaKnown RBP11.58□□□□□ -0.56
COLCA1-203ENST00000532918 NUDT12Q9BQG2 462 aa11.58□□□□□ -0.56
COLCA1-203ENST00000532918 MXD3Q9BW11 206 aa11.58□□□□□ -0.56
COLCA1-203ENST00000532918 OSBPL5Q9H0X9 879 aaPredicted RBP11.58□□□□□ -0.56
COLCA1-203ENST00000532918 STK36Q9NRP7 1315 aa11.58□□□□□ -0.56
COLCA1-203ENST00000532918 CAMTA2O94983 1202 aa11.58□□□□□ -0.56
COLCA1-203ENST00000532918 TXNP10599 105 aaKnown RBP11.58□□□□□ -0.56
COLCA1-203ENST00000532918 DBN1Q16643 649 aa11.58□□□□□ -0.56
COLCA1-203ENST00000532918 C10orf76Q5T2E6 689 aa11.58□□□□□ -0.56
COLCA1-203ENST00000532918 PADI6Q6TGC4 694 aa11.58□□□□□ -0.56
COLCA1-203ENST00000532918 LRRC31Q6UY01 552 aa11.58□□□□□ -0.56
COLCA1-203ENST00000532918 ZNF34Q8IZ26 560 aa11.58□□□□□ -0.56
COLCA1-203ENST00000532918 GPRC5AQ8NFJ5 357 aa11.58□□□□□ -0.56
COLCA1-203ENST00000532918 DDX27Q96GQ7 796 aaKnown RBP11.58□□□□□ -0.56
COLCA1-203ENST00000532918 MAP3K7O43318 606 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 ORC4O43929 436 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 RARBP10826 455 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 COG7P83436 770 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 LONRF3Q496Y0 759 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 CDC42BPAQ5VT25 1732 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 ZNF560Q96MR9 790 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 MRPL4Q9BYD3 311 aaKnown RBP11.57□□□□□ -0.56
COLCA1-203ENST00000532918 MYOZ2Q9NPC6 264 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 LMTK2Q8IWU2 1503 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 GADD45BO75293 160 aaPredicted RBP11.57□□□□□ -0.56
COLCA1-203ENST00000532918 GH1P01241 217 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 ZNF18P17022 549 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 PLCG1P19174 1290 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 CACNB1Q02641 598 aaPredicted RBP11.57□□□□□ -0.56
COLCA1-203ENST00000532918 ASPHQ12797 758 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 KRT33BQ14525 404 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 ADCK5Q3MIX3 580 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 GPIHBP1Q8IV16 184 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 UBE2TQ9NPD8 197 aaPredicted RBP11.57□□□□□ -0.56
COLCA1-203ENST00000532918 STRIP2Q9ULQ0 834 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 HPCAL4Q9UM19 191 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 PFASO15067 1338 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 SPHKAPQ2M3C7 1700 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 STXBP3O00186 592 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 CCNE1P24864 410 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 AP3M2P53677 418 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 ARHGAP4P98171 946 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 CC2D1AQ6P1N0 951 aaPredicted RBP11.57□□□□□ -0.56
COLCA1-203ENST00000532918 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.57□□□□□ -0.56
COLCA1-203ENST00000532918 SCINQ9Y6U3 715 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 FAM196BA6NMK8 535 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 ARHGAP25P42331 645 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 KAZNQ674X7 775 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 SWSAP1Q6NVH7 229 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 TADA2BQ86TJ2 420 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 RHPN2Q8IUC4 686 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 CCHCR1Q8TD31 782 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 NUF2Q9BZD4 464 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 THAP9Q9H5L6 903 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 GCNT4Q9P109 453 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 SLC9A2Q9UBY0 812 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 PNPLA7Q6ZV29 1317 aa11.57□□□□□ -0.56
COLCA1-203ENST00000532918 PSMD14O00487 310 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 CD58P19256 250 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 EFNA5P52803 228 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 LRRC41Q15345 812 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 ARHGEF18Q6ZSZ5 1173 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 LDHDQ86WU2 507 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 SCN4BQ8IWT1 228 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 GDAP1Q8TB36 358 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 EPSTI1Q96J88 318 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 GBP5Q96PP8 586 aa11.56□□□□□ -0.56
COLCA1-203ENST00000532918 DDX50Q9BQ39 737 aaKnown RBP11.56□□□□□ -0.56
COLCA1-203ENST00000532918 GABBR1Q9UBS5 961 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms