RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 CCDC148Q8NFR7 591 aa20.23■□□□□ 0.83
SMG1-203ENST00000532700 SEPT8Q92599 483 aa20.23■□□□□ 0.83
SMG1-203ENST00000532700 RAD9AQ99638 391 aa20.23■□□□□ 0.83
SMG1-203ENST00000532700 C17orf80Q9BSJ5 609 aa20.23■□□□□ 0.83
SMG1-203ENST00000532700 AZI2Q9H6S1 392 aa20.23■□□□□ 0.83
SMG1-203ENST00000532700 KCNJ14Q9UNX9 436 aa20.23■□□□□ 0.83
SMG1-203ENST00000532700 MSH4O15457 936 aa20.22■□□□□ 0.83
SMG1-203ENST00000532700 UPP2O95045 317 aa20.22■□□□□ 0.83
SMG1-203ENST00000532700 TDP2O95551 362 aa20.22■□□□□ 0.83
SMG1-203ENST00000532700 AK2P54819 239 aa20.22■□□□□ 0.83
SMG1-203ENST00000532700 NLRP5P59047 1200 aa20.22■□□□□ 0.83
SMG1-203ENST00000532700 MRPS6P82932 125 aaKnown RBP20.22■□□□□ 0.83
SMG1-203ENST00000532700 SWSAP1Q6NVH7 229 aa20.22■□□□□ 0.83
SMG1-203ENST00000532700 TBCKQ8TEA7 893 aa20.22■□□□□ 0.83
SMG1-203ENST00000532700 CDHR5Q9HBB8 845 aa20.22■□□□□ 0.83
SMG1-203ENST00000532700 SH3GLB2Q9NR46 395 aa20.22■□□□□ 0.83
SMG1-203ENST00000532700 BACH1O14867 736 aa20.21■□□□□ 0.83
SMG1-203ENST00000532700 EFCAB14O75071 495 aa20.21■□□□□ 0.83
SMG1-203ENST00000532700 DEXIO95424 95 aa20.21■□□□□ 0.83
SMG1-203ENST00000532700 AMHP03971 560 aa20.21■□□□□ 0.83
SMG1-203ENST00000532700 CD52P31358 61 aa20.21■□□□□ 0.83
SMG1-203ENST00000532700 UGCGQ16739 394 aa20.21■□□□□ 0.83
SMG1-203ENST00000532700 MTHFD1LQ6UB35 978 aa20.21■□□□□ 0.83
SMG1-203ENST00000532700 TRMT1LQ7Z2T5 733 aaKnown RBP20.21■□□□□ 0.83
SMG1-203ENST00000532700 SP7Q8TDD2 431 aaPredicted RBP20.21■□□□□ 0.83
SMG1-203ENST00000532700 TOP1MTQ969P6 601 aa20.21■□□□□ 0.83
SMG1-203ENST00000532700 SUGCTQ9HAC7 445 aa20.21■□□□□ 0.83
SMG1-203ENST00000532700 ZNF302Q9NR11 478 aa20.21■□□□□ 0.83
SMG1-203ENST00000532700 PCDHA4Q9UN74 947 aa20.21■□□□□ 0.83
SMG1-203ENST00000532700 XIRP2A4UGR9 3374 aa20.21■□□□□ 0.83
SMG1-203ENST00000532700 RALGAPA2Q2PPJ7 1873 aa20.2■□□□□ 0.82
SMG1-203ENST00000532700 RRN3P2A6NIE6 340 aa20.2■□□□□ 0.82
SMG1-203ENST00000532700 PFKFB2O60825 505 aa20.2■□□□□ 0.82
SMG1-203ENST00000532700 ERVK-21P61565 698 aa20.2■□□□□ 0.82
SMG1-203ENST00000532700 TFF2Q03403 129 aa20.2■□□□□ 0.82
SMG1-203ENST00000532700 PDXDC2PQ6P474 469 aa20.2■□□□□ 0.82
SMG1-203ENST00000532700 RTN4RL1Q86UN2 441 aaPredicted RBP20.2■□□□□ 0.82
SMG1-203ENST00000532700 NECAB1Q8N987 351 aa20.2■□□□□ 0.82
SMG1-203ENST00000532700 OXER1Q8TDS5 423 aa20.2■□□□□ 0.82
SMG1-203ENST00000532700 ATP8B4Q8TF62 1192 aa20.2■□□□□ 0.82
SMG1-203ENST00000532700 IL17RAQ96F46 866 aa20.2■□□□□ 0.82
SMG1-203ENST00000532700 PCDHA2Q9Y5H9 948 aa20.2■□□□□ 0.82
SMG1-203ENST00000532700 CPLX1O14810 134 aa20.19■□□□□ 0.82
SMG1-203ENST00000532700 ZNF862O60290 1169 aa20.19■□□□□ 0.82
SMG1-203ENST00000532700 LINC00271P0C7V0 271 aa20.19■□□□□ 0.82
SMG1-203ENST00000532700 POU3F3P20264 500 aaPredicted RBP20.19■□□□□ 0.82
SMG1-203ENST00000532700 KLRC1P26715 233 aa20.19■□□□□ 0.82
SMG1-203ENST00000532700 SETQ01105 290 aaPredicted RBP20.19■□□□□ 0.82
SMG1-203ENST00000532700 ST3GAL1Q11201 340 aa20.19■□□□□ 0.82
SMG1-203ENST00000532700 EARS2Q5JPH6 523 aaKnown RBP20.19■□□□□ 0.82
SMG1-203ENST00000532700 TRIM22Q8IYM9 498 aa20.19■□□□□ 0.82
SMG1-203ENST00000532700 BLIDQ8IZY5 108 aa20.19■□□□□ 0.82
SMG1-203ENST00000532700 DAGLBQ8NCG7 672 aa20.19■□□□□ 0.82
SMG1-203ENST00000532700 BICD2Q8TD16 824 aa20.19■□□□□ 0.82
SMG1-203ENST00000532700 TMEM40Q8WWA1 233 aa20.19■□□□□ 0.82
SMG1-203ENST00000532700 SLC5A5Q92911 643 aa20.19■□□□□ 0.82
SMG1-203ENST00000532700 PPP1R16BQ96T49 567 aa20.19■□□□□ 0.82
SMG1-203ENST00000532700 UNC45AQ9H3U1 944 aa20.19■□□□□ 0.82
SMG1-203ENST00000532700 MAFBQ9Y5Q3 323 aaPredicted RBP20.19■□□□□ 0.82
SMG1-203ENST00000532700 IGSF9BQ9UPX0 1349 aa20.19■□□□□ 0.82
SMG1-203ENST00000532700 TTC3P53804 2025 aa20.19■□□□□ 0.82
SMG1-203ENST00000532700 TCF20Q9UGU0 1960 aaKnown RBP20.18■□□□□ 0.82
SMG1-203ENST00000532700 FAM205CA6NFA0 338 aa20.18■□□□□ 0.82
SMG1-203ENST00000532700 C22orf31O95567 290 aa20.18■□□□□ 0.82
SMG1-203ENST00000532700 FDPSP14324 419 aaKnown RBP20.18■□□□□ 0.82
SMG1-203ENST00000532700 TMEM266Q2M3C6 531 aa20.18■□□□□ 0.82
SMG1-203ENST00000532700 ZNF746Q6NUN9 644 aaPredicted RBP20.18■□□□□ 0.82
SMG1-203ENST00000532700 MIS18BP1Q6P0N0 1132 aa20.18■□□□□ 0.82
SMG1-203ENST00000532700 KIAA0319LQ8IZA0 1049 aa20.18■□□□□ 0.82
SMG1-203ENST00000532700 TGS1Q96RS0 853 aaKnown RBP20.18■□□□□ 0.82
SMG1-203ENST00000532700 TMX1Q9H3N1 280 aa20.18■□□□□ 0.82
SMG1-203ENST00000532700 RC3H2Q9HBD1 1191 aaKnown RBP20.18■□□□□ 0.82
SMG1-203ENST00000532700 TBC1D22BQ9NU19 505 aa20.18■□□□□ 0.82
SMG1-203ENST00000532700 GABBR1Q9UBS5 961 aa20.18■□□□□ 0.82
SMG1-203ENST00000532700 TRPV2Q9Y5S1 764 aa20.18■□□□□ 0.82
SMG1-203ENST00000532700 SMIM35A0A1B0GVV1 85 aa20.17■□□□□ 0.82
SMG1-203ENST00000532700 ENPP3O14638 875 aa20.17■□□□□ 0.82
SMG1-203ENST00000532700 CHMP2AO43633 222 aa20.17■□□□□ 0.82
SMG1-203ENST00000532700 SLC37A4O43826 429 aa20.17■□□□□ 0.82
SMG1-203ENST00000532700 EIF5BO60841 1220 aaKnown RBP20.17■□□□□ 0.82
SMG1-203ENST00000532700 ME3Q16798 604 aa20.17■□□□□ 0.82
SMG1-203ENST00000532700 INF2Q27J81 1249 aa20.17■□□□□ 0.82
SMG1-203ENST00000532700 FAM160B1Q5W0V3 765 aa20.17■□□□□ 0.82
SMG1-203ENST00000532700 MCTP2Q6DN12 878 aa20.17■□□□□ 0.82
SMG1-203ENST00000532700 TSHZ1Q6ZSZ6 1077 aa20.17■□□□□ 0.82
SMG1-203ENST00000532700 APBB2Q92870 758 aa20.17■□□□□ 0.82
SMG1-203ENST00000532700 PHF20Q9BVI0 1012 aa20.17■□□□□ 0.82
SMG1-203ENST00000532700 THEGQ9P2T0 379 aa20.17■□□□□ 0.82
SMG1-203ENST00000532700 INSL6Q9Y581 213 aa20.17■□□□□ 0.82
SMG1-203ENST00000532700 CUL9Q8IWT3 2517 aa20.17■□□□□ 0.82
SMG1-203ENST00000532700 TMEM150BA6NC51 233 aa20.16■□□□□ 0.82
SMG1-203ENST00000532700 HBP1O60381 514 aa20.16■□□□□ 0.82
SMG1-203ENST00000532700 PSMD10O75832 226 aa20.16■□□□□ 0.82
SMG1-203ENST00000532700 USP11P51784 963 aa20.16■□□□□ 0.82
SMG1-203ENST00000532700 ANAPC15P60006 121 aa20.16■□□□□ 0.82
SMG1-203ENST00000532700 B3GNT9Q6UX72 402 aa20.16■□□□□ 0.82
SMG1-203ENST00000532700 RSPH3Q86UC2 560 aa20.16■□□□□ 0.82
SMG1-203ENST00000532700 CRIPAKQ8N1N5 446 aa20.16■□□□□ 0.82
SMG1-203ENST00000532700 MBOAT7Q96N66 472 aa20.16■□□□□ 0.82
SMG1-203ENST00000532700 CELF4Q9BZC1 486 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms