RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	SLC22A31	A6NKX4	558 aa		7.23	□□□□□ -1.25
PUM1-222	ENST00000531867	DNAJA2	O60884	412 aa		7.23	□□□□□ -1.25
PUM1-222	ENST00000531867	GBP1	P32455	592 aa		7.23	□□□□□ -1.25
PUM1-222	ENST00000531867	DLGAP5	Q15398	846 aa		7.23	□□□□□ -1.25
PUM1-222	ENST00000531867	CCDC152	Q4G0S7	254 aa		7.23	□□□□□ -1.25
PUM1-222	ENST00000531867	FAM109B	Q6ICB4	259 aa	Predicted RBP	7.23	□□□□□ -1.25
PUM1-222	ENST00000531867	BAHD1	Q8TBE0	780 aa	Predicted RBP	7.23	□□□□□ -1.25
PUM1-222	ENST00000531867	ALPK1	Q96QP1	1244 aa		7.23	□□□□□ -1.25
PUM1-222	ENST00000531867	KIF2C	Q99661	725 aa		7.23	□□□□□ -1.25
PUM1-222	ENST00000531867	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	7.23	□□□□□ -1.25
PUM1-222	ENST00000531867	TSPYL4	Q9UJ04	414 aa		7.23	□□□□□ -1.25
PUM1-222	ENST00000531867	MINPP1	Q9UNW1	487 aa		7.23	□□□□□ -1.25
PUM1-222	ENST00000531867	RIPOR2	Q9Y4F9	1068 aa		7.23	□□□□□ -1.25
PUM1-222	ENST00000531867	ADGRA2	Q96PE1	1338 aa		7.23	□□□□□ -1.25
PUM1-222	ENST00000531867	MGAM	O43451	1857 aa		7.22	□□□□□ -1.25
PUM1-222	ENST00000531867	PDE8A	O60658	829 aa		7.22	□□□□□ -1.25
PUM1-222	ENST00000531867	PCCA	P05165	728 aa	Predicted RBP	7.22	□□□□□ -1.25
PUM1-222	ENST00000531867	ATP2B1	P20020	1258 aa		7.22	□□□□□ -1.25
PUM1-222	ENST00000531867	HOXD10	P28358	340 aa		7.22	□□□□□ -1.25
PUM1-222	ENST00000531867	TPP2	P29144	1249 aa	Predicted RBP	7.22	□□□□□ -1.25
PUM1-222	ENST00000531867	CCNF	P41002	786 aa		7.22	□□□□□ -1.25
PUM1-222	ENST00000531867	CCT4	P50991	539 aa	Known RBP	7.22	□□□□□ -1.25
PUM1-222	ENST00000531867	RAD51AP2	Q09MP3	1159 aa		7.22	□□□□□ -1.25
PUM1-222	ENST00000531867	ARSH	Q5FYA8	562 aa		7.22	□□□□□ -1.25
PUM1-222	ENST00000531867	CDCP2	Q5VXM1	449 aa		7.22	□□□□□ -1.25
PUM1-222	ENST00000531867	OVOS1	Q6IE37	1185 aa		7.22	□□□□□ -1.25
PUM1-222	ENST00000531867	ANKRD18A	Q8IVF6	992 aa		7.22	□□□□□ -1.25
PUM1-222	ENST00000531867	CERS5	Q8N5B7	392 aa		7.22	□□□□□ -1.25
PUM1-222	ENST00000531867	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	7.22	□□□□□ -1.25
PUM1-222	ENST00000531867	MICAL1	Q8TDZ2	1067 aa		7.22	□□□□□ -1.25
PUM1-222	ENST00000531867	FAM168A	Q92567	244 aa		7.22	□□□□□ -1.25
PUM1-222	ENST00000531867	PRMT6	Q96LA8	375 aa	Predicted RBP	7.22	□□□□□ -1.25
PUM1-222	ENST00000531867	TEPSIN	Q96N21	525 aa		7.22	□□□□□ -1.25
PUM1-222	ENST00000531867	GUCD1	Q96NT3	240 aa		7.22	□□□□□ -1.25
PUM1-222	ENST00000531867	LNPK	Q9C0E8	428 aa		7.22	□□□□□ -1.25
PUM1-222	ENST00000531867	CCSER2	Q9H7U1	834 aa		7.22	□□□□□ -1.25
PUM1-222	ENST00000531867	PCDHAC2	Q9Y5I4	1007 aa		7.22	□□□□□ -1.25
PUM1-222	ENST00000531867	SPTBN5	Q9NRC6	3674 aa	Known RBP	7.22	□□□□□ -1.25
PUM1-222	ENST00000531867	COL2A1	P02458	1487 aa	Predicted RBP	7.22	□□□□□ -1.25
PUM1-222	ENST00000531867	AOX1	Q06278	1338 aa		7.22	□□□□□ -1.25
PUM1-222	ENST00000531867	RPTOR	Q8N122	1335 aa		7.22	□□□□□ -1.25
PUM1-222	ENST00000531867	CLSPN	Q9HAW4	1339 aa		7.22	□□□□□ -1.25
PUM1-222	ENST00000531867	IRS2	Q9Y4H2	1338 aa		7.22	□□□□□ -1.25
PUM1-222	ENST00000531867	BTBD19	C9JJ37	291 aa		7.21	□□□□□ -1.26
PUM1-222	ENST00000531867	WDHD1	O75717	1129 aa	Predicted RBP	7.21	□□□□□ -1.26
PUM1-222	ENST00000531867	CETP	P11597	493 aa		7.21	□□□□□ -1.26
PUM1-222	ENST00000531867	SRF	P11831	508 aa		7.21	□□□□□ -1.26
PUM1-222	ENST00000531867	IMPDH2	P12268	514 aa		7.21	□□□□□ -1.26
PUM1-222	ENST00000531867	PPP2R1A	P30153	589 aa		7.21	□□□□□ -1.26
PUM1-222	ENST00000531867	MCM4	P33991	863 aa		7.21	□□□□□ -1.26
PUM1-222	ENST00000531867	AFM	P43652	599 aa		7.21	□□□□□ -1.26
PUM1-222	ENST00000531867	PSMC4	P43686	418 aa		7.21	□□□□□ -1.26
PUM1-222	ENST00000531867	FKBP1A	P62942	108 aa	Known RBP	7.21	□□□□□ -1.26
PUM1-222	ENST00000531867	UBXN2A	P68543	259 aa		7.21	□□□□□ -1.26
PUM1-222	ENST00000531867	GNL2	Q13823	731 aa	Known RBP	7.21	□□□□□ -1.26
PUM1-222	ENST00000531867	VGLL4	Q14135	290 aa		7.21	□□□□□ -1.26
PUM1-222	ENST00000531867	RASA3	Q14644	834 aa		7.21	□□□□□ -1.26
PUM1-222	ENST00000531867	GAB4	Q2WGN9	574 aa		7.21	□□□□□ -1.26
PUM1-222	ENST00000531867	GK5	Q6ZS86	529 aa		7.21	□□□□□ -1.26
PUM1-222	ENST00000531867	NLRC3	Q7RTR2	1065 aa		7.21	□□□□□ -1.26
PUM1-222	ENST00000531867	TSPYL5	Q86VY4	417 aa	Predicted RBP	7.21	□□□□□ -1.26
PUM1-222	ENST00000531867	TDH	Q8IZJ6	230 aa		7.21	□□□□□ -1.26
PUM1-222	ENST00000531867	SLC43A3	Q8NBI5	491 aa		7.21	□□□□□ -1.26
PUM1-222	ENST00000531867	TMEM40	Q8WWA1	233 aa		7.21	□□□□□ -1.26
PUM1-222	ENST00000531867	ASCC2	Q9H1I8	757 aa	Predicted RBP	7.21	□□□□□ -1.26
PUM1-222	ENST00000531867	DUSP15	Q9H1R2	295 aa	Predicted RBP	7.21	□□□□□ -1.26
PUM1-222	ENST00000531867	CNNM2	Q9H8M5	875 aa		7.21	□□□□□ -1.26
PUM1-222	ENST00000531867	METTL14	Q9HCE5	456 aa	Known RBP	7.21	□□□□□ -1.26
PUM1-222	ENST00000531867	CHPF2	Q9P2E5	772 aa		7.21	□□□□□ -1.26
PUM1-222	ENST00000531867	CTNND2	Q9UQB3	1225 aa		7.21	□□□□□ -1.26
PUM1-222	ENST00000531867	VCAN	P13611	3396 aa		7.21	□□□□□ -1.26
PUM1-222	ENST00000531867	ARAP2	Q8WZ64	1704 aa		7.21	□□□□□ -1.26
PUM1-222	ENST00000531867	MYH3	P11055	1940 aa		7.21	□□□□□ -1.26
PUM1-222	ENST00000531867	SPEF2	Q9C093	1822 aa		7.2	□□□□□ -1.26
PUM1-222	ENST00000531867	TLDC2	A0PJX2	215 aa		7.2	□□□□□ -1.26
PUM1-222	ENST00000531867	CLRN2	A0PK11	232 aa		7.2	□□□□□ -1.26
PUM1-222	ENST00000531867	MEIS3P2	A8K0S8	358 aa		7.2	□□□□□ -1.26
PUM1-222	ENST00000531867	MYO1B	O43795	1136 aa		7.2	□□□□□ -1.26
PUM1-222	ENST00000531867	HOXB7	P09629	217 aa		7.2	□□□□□ -1.26
PUM1-222	ENST00000531867	GDNF	P39905	211 aa		7.2	□□□□□ -1.26
PUM1-222	ENST00000531867	CFAP100	Q494V2	611 aa		7.2	□□□□□ -1.26
PUM1-222	ENST00000531867	C15orf52	Q6ZUT6	534 aa	Known RBP	7.2	□□□□□ -1.26
PUM1-222	ENST00000531867	ZSWIM9	Q86XI8	627 aa		7.2	□□□□□ -1.26
PUM1-222	ENST00000531867	CCDC191	Q8NCU4	936 aa		7.2	□□□□□ -1.26
PUM1-222	ENST00000531867	RAET1E	Q8TD07	263 aa		7.2	□□□□□ -1.26
PUM1-222	ENST00000531867	EAF1	Q96JC9	268 aa	Predicted RBP	7.2	□□□□□ -1.26
PUM1-222	ENST00000531867	CDC5L	Q99459	802 aa	Known RBP	7.2	□□□□□ -1.26
PUM1-222	ENST00000531867	CD209	Q9NNX6	404 aa		7.2	□□□□□ -1.26
PUM1-222	ENST00000531867	DBF4	Q9UBU7	674 aa	Predicted RBP	7.2	□□□□□ -1.26
PUM1-222	ENST00000531867	DUSP13	Q9UII6	198 aa		7.2	□□□□□ -1.26
PUM1-222	ENST00000531867	FAM205A	Q6ZU69	1335 aa		7.2	□□□□□ -1.26
PUM1-222	ENST00000531867	MYPN	Q86TC9	1320 aa		7.2	□□□□□ -1.26
PUM1-222	ENST00000531867	CHL1	O00533	1208 aa		7.19	□□□□□ -1.26
PUM1-222	ENST00000531867	UBOX5	O94941	541 aa		7.19	□□□□□ -1.26
PUM1-222	ENST00000531867	ESR1	P03372	595 aa		7.19	□□□□□ -1.26
PUM1-222	ENST00000531867	KLRK1	P26718	216 aa		7.19	□□□□□ -1.26
PUM1-222	ENST00000531867	MAGEA10	P43363	369 aa	Predicted RBP	7.19	□□□□□ -1.26
PUM1-222	ENST00000531867	CLC	Q05315	142 aa		7.19	□□□□□ -1.26
PUM1-222	ENST00000531867	ZNF394	Q53GI3	561 aa		7.19	□□□□□ -1.26
PUM1-222	ENST00000531867	SDE2	Q6IQ49	451 aa		7.19	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms