RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 CMTR1Q8N1G2 835 aaKnown RBP10.34□□□□□ -0.75
USF1-210ENST00000531842 ATP8B4Q8TF62 1192 aa10.34□□□□□ -0.75
USF1-210ENST00000531842 SUSD6Q92537 303 aa10.34□□□□□ -0.75
USF1-210ENST00000531842 S1PR5Q9H228 398 aa10.34□□□□□ -0.75
USF1-210ENST00000531842 GINS2Q9Y248 185 aa10.34□□□□□ -0.75
USF1-210ENST00000531842 C2orf16Q68DN1 1984 aa10.34□□□□□ -0.75
USF1-210ENST00000531842 PNMA6FA0A0J9YX94 578 aa10.33□□□□□ -0.76
USF1-210ENST00000531842 MBLAC1A4D2B0 266 aaPredicted RBP10.33□□□□□ -0.76
USF1-210ENST00000531842 TBKBP1A7MCY6 615 aa10.33□□□□□ -0.76
USF1-210ENST00000531842 HIDE1A8MVS5 230 aa10.33□□□□□ -0.76
USF1-210ENST00000531842 MEIS2O14770 477 aa10.33□□□□□ -0.76
USF1-210ENST00000531842 FGF18O76093 207 aa10.33□□□□□ -0.76
USF1-210ENST00000531842 BRD1O95696 1058 aa10.33□□□□□ -0.76
USF1-210ENST00000531842 ASGR2P07307 311 aa10.33□□□□□ -0.76
USF1-210ENST00000531842 FGFR1P11362 822 aa10.33□□□□□ -0.76
USF1-210ENST00000531842 SCG2P13521 617 aa10.33□□□□□ -0.76
USF1-210ENST00000531842 ITGB5P18084 799 aa10.33□□□□□ -0.76
USF1-210ENST00000531842 TECP42680 631 aa10.33□□□□□ -0.76
USF1-210ENST00000531842 IMMTQ16891 758 aaKnown RBP10.33□□□□□ -0.76
USF1-210ENST00000531842 CCDC178Q5BJE1 867 aa10.33□□□□□ -0.76
USF1-210ENST00000531842 FRMD5Q7Z6J6 570 aa10.33□□□□□ -0.76
USF1-210ENST00000531842 ZBTB33Q86T24 672 aa10.33□□□□□ -0.76
USF1-210ENST00000531842 RAB11FIP4Q86YS3 637 aa10.33□□□□□ -0.76
USF1-210ENST00000531842 PLEKHM2Q8IWE5 1019 aa10.33□□□□□ -0.76
USF1-210ENST00000531842 SMARCC2Q8TAQ2 1214 aa10.33□□□□□ -0.76
USF1-210ENST00000531842 TMEM40Q8WWA1 233 aa10.33□□□□□ -0.76
USF1-210ENST00000531842 GLG1Q92896 1179 aa10.33□□□□□ -0.76
USF1-210ENST00000531842 RIPOR3Q96MK2 946 aa10.33□□□□□ -0.76
USF1-210ENST00000531842 MAP3K20Q9NYL2 800 aaKnown RBP10.33□□□□□ -0.76
USF1-210ENST00000531842 TRPV2Q9Y5S1 764 aa10.33□□□□□ -0.76
USF1-210ENST00000531842 MYH9P35579 1960 aaKnown RBP10.32□□□□□ -0.76
USF1-210ENST00000531842 PRR23AA6NEV1 266 aa10.32□□□□□ -0.76
USF1-210ENST00000531842 C2CD4DB7Z1M9 353 aa10.32□□□□□ -0.76
USF1-210ENST00000531842 NFX1Q12986 1120 aaKnown RBP10.32□□□□□ -0.76
USF1-210ENST00000531842 PAK2Q13177 524 aa10.32□□□□□ -0.76
USF1-210ENST00000531842 PLCB4Q15147 1175 aa10.32□□□□□ -0.76
USF1-210ENST00000531842 DUSP6Q16828 381 aa10.32□□□□□ -0.76
USF1-210ENST00000531842 PCNX4Q63HM2 1172 aa10.32□□□□□ -0.76
USF1-210ENST00000531842 ANKRD54Q6NXT1 300 aa10.32□□□□□ -0.76
USF1-210ENST00000531842 TAF2Q6P1X5 1199 aa10.32□□□□□ -0.76
USF1-210ENST00000531842 COLGALT1Q8NBJ5 622 aa10.32□□□□□ -0.76
USF1-210ENST00000531842 KREMEN2Q8NCW0 462 aa10.32□□□□□ -0.76
USF1-210ENST00000531842 CYP2W1Q8TAV3 490 aa10.32□□□□□ -0.76
USF1-210ENST00000531842 PGBD1Q96JS3 809 aa10.32□□□□□ -0.76
USF1-210ENST00000531842 KRT23Q9C075 422 aa10.32□□□□□ -0.76
USF1-210ENST00000531842 DIAPH3Q9NSV4 1193 aa10.32□□□□□ -0.76
USF1-210ENST00000531842 TYW1Q9NV66 732 aaKnown RBP10.32□□□□□ -0.76
USF1-210ENST00000531842 TMEM260Q9NX78 707 aa10.32□□□□□ -0.76
USF1-210ENST00000531842 LRFN2Q9ULH4 789 aa10.32□□□□□ -0.76
USF1-210ENST00000531842 TRPC6Q9Y210 931 aa10.32□□□□□ -0.76
USF1-210ENST00000531842 NOC2LQ9Y3T9 749 aaKnown RBP10.32□□□□□ -0.76
USF1-210ENST00000531842 NCOR2Q9Y618 2525 aa10.31□□□□□ -0.76
USF1-210ENST00000531842 IFIT3O14879 490 aaKnown RBP10.31□□□□□ -0.76
USF1-210ENST00000531842 FSCN2O14926 492 aa10.31□□□□□ -0.76
USF1-210ENST00000531842 GALR2O43603 387 aaPredicted RBP10.31□□□□□ -0.76
USF1-210ENST00000531842 PLEKHA8P1O95397 391 aa10.31□□□□□ -0.76
USF1-210ENST00000531842 RXRAP19793 462 aa10.31□□□□□ -0.76
USF1-210ENST00000531842 ANTXR2P58335 489 aa10.31□□□□□ -0.76
USF1-210ENST00000531842 PTH1RQ03431 593 aa10.31□□□□□ -0.76
USF1-210ENST00000531842 TROAPQ12815 778 aa10.31□□□□□ -0.76
USF1-210ENST00000531842 KCNC3Q14003 757 aa10.31□□□□□ -0.76
USF1-210ENST00000531842 LRRC55Q6ZSA7 311 aa10.31□□□□□ -0.76
USF1-210ENST00000531842 RSPH3Q86UC2 560 aa10.31□□□□□ -0.76
USF1-210ENST00000531842 THNSL1Q8IYQ7 743 aa10.31□□□□□ -0.76
USF1-210ENST00000531842 C12orf76Q8N812 135 aaPredicted RBP10.31□□□□□ -0.76
USF1-210ENST00000531842 EXOC6Q8TAG9 804 aa10.31□□□□□ -0.76
USF1-210ENST00000531842 SEPT1Q8WYJ6 367 aa10.31□□□□□ -0.76
USF1-210ENST00000531842 PPP2R3CQ969Q6 453 aa10.31□□□□□ -0.76
USF1-210ENST00000531842 ZNF668Q96K58 619 aaPredicted RBP10.31□□□□□ -0.76
USF1-210ENST00000531842 NEK1Q96PY6 1258 aa10.31□□□□□ -0.76
USF1-210ENST00000531842 DSCC1Q9BVC3 393 aa10.31□□□□□ -0.76
USF1-210ENST00000531842 CELF4Q9BZC1 486 aaKnown RBP10.31□□□□□ -0.76
USF1-210ENST00000531842 POMKQ9H5K3 350 aa10.31□□□□□ -0.76
USF1-210ENST00000531842 CWH43Q9H720 699 aa10.31□□□□□ -0.76
USF1-210ENST00000531842 ERAP1Q9NZ08 941 aa10.31□□□□□ -0.76
USF1-210ENST00000531842 DENND4AQ7Z401 1863 aa10.31□□□□□ -0.76
USF1-210ENST00000531842 IGSF9BQ9UPX0 1349 aa10.31□□□□□ -0.76
USF1-210ENST00000531842 SPTBN2O15020 2390 aa10.3□□□□□ -0.76
USF1-210ENST00000531842 PI15O43692 258 aa10.3□□□□□ -0.76
USF1-210ENST00000531842 IGHDP01880 384 aa10.3□□□□□ -0.76
USF1-210ENST00000531842 CYP21A2P08686 494 aa10.3□□□□□ -0.76
USF1-210ENST00000531842 ATF7P17544 494 aaPredicted RBP10.3□□□□□ -0.76
USF1-210ENST00000531842 SARSP49591 514 aaKnown RBP10.3□□□□□ -0.76
USF1-210ENST00000531842 MFAP1P55081 439 aaKnown RBP10.3□□□□□ -0.76
USF1-210ENST00000531842 TRMT1LQ7Z2T5 733 aaKnown RBP10.3□□□□□ -0.76
USF1-210ENST00000531842 PRRX2Q99811 253 aa10.3□□□□□ -0.76
USF1-210ENST00000531842 ADAM2Q99965 735 aa10.3□□□□□ -0.76
USF1-210ENST00000531842 TCF25Q9BQ70 676 aa10.3□□□□□ -0.76
USF1-210ENST00000531842 SENP7Q9BQF6 1050 aa10.3□□□□□ -0.76
USF1-210ENST00000531842 ERVK-5Q9HDB9 667 aa10.3□□□□□ -0.76
USF1-210ENST00000531842 PCDHB7Q9Y5E2 793 aa10.3□□□□□ -0.76
USF1-210ENST00000531842 UBIAD1Q9Y5Z9 338 aa10.3□□□□□ -0.76
USF1-210ENST00000531842 CEP250Q9BV73 2442 aa10.3□□□□□ -0.76
USF1-210ENST00000531842 DDX39AO00148 427 aaKnown RBP10.29□□□□□ -0.76
USF1-210ENST00000531842 STAM2O75886 525 aa10.29□□□□□ -0.76
USF1-210ENST00000531842 STAG3L1P0CL83 205 aa10.29□□□□□ -0.76
USF1-210ENST00000531842 KRT76Q01546 638 aa10.29□□□□□ -0.76
USF1-210ENST00000531842 MTMR1Q13613 665 aa10.29□□□□□ -0.76
USF1-210ENST00000531842 WTAPQ15007 396 aa10.29□□□□□ -0.76
USF1-210ENST00000531842 NAALADL2Q58DX5 795 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms