RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 SMAD3P84022 425 aaKnown RBP16.32■□□□□ 0.2
FOXR1-202ENST00000531539 ZNF484Q5JVG2 852 aa16.32■□□□□ 0.2
FOXR1-202ENST00000531539 RSPH3Q86UC2 560 aa16.32■□□□□ 0.2
FOXR1-202ENST00000531539 ATP8B4Q8TF62 1192 aa16.32■□□□□ 0.2
FOXR1-202ENST00000531539 DNAJB3Q8WWF6 145 aa16.32■□□□□ 0.2
FOXR1-202ENST00000531539 FAM49AQ9H0Q0 323 aaPredicted RBP16.32■□□□□ 0.2
FOXR1-202ENST00000531539 KAT6AQ92794 2004 aa16.31■□□□□ 0.2
FOXR1-202ENST00000531539 MBLAC1A4D2B0 266 aaPredicted RBP16.31■□□□□ 0.2
FOXR1-202ENST00000531539 MBTPS1Q14703 1052 aa16.31■□□□□ 0.2
FOXR1-202ENST00000531539 TAF2Q6P1X5 1199 aa16.31■□□□□ 0.2
FOXR1-202ENST00000531539 MTHFD1LQ6UB35 978 aa16.31■□□□□ 0.2
FOXR1-202ENST00000531539 Q7L0L9 218 aa16.31■□□□□ 0.2
FOXR1-202ENST00000531539 DEFB123Q8N688 67 aa16.31■□□□□ 0.2
FOXR1-202ENST00000531539 BBXQ8WY36 941 aaPredicted RBP16.31■□□□□ 0.2
FOXR1-202ENST00000531539 HAS1Q92839 578 aa16.31■□□□□ 0.2
FOXR1-202ENST00000531539 KCNMB3Q9NPA1 279 aa16.31■□□□□ 0.2
FOXR1-202ENST00000531539 PCDHA2Q9Y5H9 948 aa16.31■□□□□ 0.2
FOXR1-202ENST00000531539 TBX3O15119 743 aa16.3■□□□□ 0.2
FOXR1-202ENST00000531539 CAND2O75155 1236 aa16.3■□□□□ 0.2
FOXR1-202ENST00000531539 CXCL10P02778 98 aa16.3■□□□□ 0.2
FOXR1-202ENST00000531539 GPR153Q6NV75 609 aa16.3■□□□□ 0.2
FOXR1-202ENST00000531539 POTEDQ86YR6 584 aa16.3■□□□□ 0.2
FOXR1-202ENST00000531539 OSBPL7Q9BZF2 842 aa16.3■□□□□ 0.2
FOXR1-202ENST00000531539 FOXP1Q9H334 677 aaPredicted RBP16.3■□□□□ 0.2
FOXR1-202ENST00000531539 KIF3AQ9Y496 699 aa16.3■□□□□ 0.2
FOXR1-202ENST00000531539 SCN5AQ14524 2016 aa16.29■□□□□ 0.2
FOXR1-202ENST00000531539 DDX11L8A8MPP1 907 aa16.29■□□□□ 0.2
FOXR1-202ENST00000531539 EML1O00423 815 aa16.29■□□□□ 0.2
FOXR1-202ENST00000531539 WNT7AO00755 349 aa16.29■□□□□ 0.2
FOXR1-202ENST00000531539 ZNF862O60290 1169 aa16.29■□□□□ 0.2
FOXR1-202ENST00000531539 CHRNA1P02708 482 aa16.29■□□□□ 0.2
FOXR1-202ENST00000531539 GJB2P29033 226 aa16.29■□□□□ 0.2
FOXR1-202ENST00000531539 IKBKEQ14164 716 aa16.29■□□□□ 0.2
FOXR1-202ENST00000531539 ZNF174Q15697 407 aa16.29■□□□□ 0.2
FOXR1-202ENST00000531539 UGCGQ16739 394 aa16.29■□□□□ 0.2
FOXR1-202ENST00000531539 TCTN1Q2MV58 587 aa16.29■□□□□ 0.2
FOXR1-202ENST00000531539 FAM26DQ5JW98 314 aa16.29■□□□□ 0.2
FOXR1-202ENST00000531539 CNKSR3Q6P9H4 555 aa16.29■□□□□ 0.2
FOXR1-202ENST00000531539 B3GNT9Q6UX72 402 aa16.29■□□□□ 0.2
FOXR1-202ENST00000531539 RPAINQ86UA6 219 aa16.29■□□□□ 0.2
FOXR1-202ENST00000531539 SLFN12Q8IYM2 578 aa16.29■□□□□ 0.2
FOXR1-202ENST00000531539 DBF4BQ8NFT6 615 aa16.29■□□□□ 0.2
FOXR1-202ENST00000531539 RDM1Q8NG50 284 aa16.29■□□□□ 0.2
FOXR1-202ENST00000531539 FAM161BQ96MY7 647 aa16.29■□□□□ 0.2
FOXR1-202ENST00000531539 SMC3Q9UQE7 1217 aa16.29■□□□□ 0.2
FOXR1-202ENST00000531539 SMIM35A0A1B0GVV1 85 aa16.28■□□□□ 0.2
FOXR1-202ENST00000531539 ATP2A2P16615 1042 aaKnown RBP16.28■□□□□ 0.2
FOXR1-202ENST00000531539 MCM7P33993 719 aa16.28■□□□□ 0.2
FOXR1-202ENST00000531539 PBX2P40425 430 aa16.28■□□□□ 0.2
FOXR1-202ENST00000531539 TXKP42681 527 aa16.28■□□□□ 0.2
FOXR1-202ENST00000531539 KCNJ6P48051 423 aa16.28■□□□□ 0.2
FOXR1-202ENST00000531539 RABGGTBP53611 331 aa16.28■□□□□ 0.2
FOXR1-202ENST00000531539 TMEM62Q0P6H9 643 aa16.28■□□□□ 0.2
FOXR1-202ENST00000531539 CALCRLQ16602 461 aa16.28■□□□□ 0.2
FOXR1-202ENST00000531539 IER5Q5VY09 327 aa16.28■□□□□ 0.2
FOXR1-202ENST00000531539 MCTP1Q6DN14 999 aa16.28■□□□□ 0.2
FOXR1-202ENST00000531539 NCAPH2Q6IBW4 605 aa16.28■□□□□ 0.2
FOXR1-202ENST00000531539 NOSTRINQ8IVI9 506 aa16.28■□□□□ 0.2
FOXR1-202ENST00000531539 NME8Q8N427 588 aa16.28■□□□□ 0.2
FOXR1-202ENST00000531539 BANK1Q8NDB2 785 aa16.28■□□□□ 0.2
FOXR1-202ENST00000531539 SEPT8Q92599 483 aa16.28■□□□□ 0.2
FOXR1-202ENST00000531539 FAM167AQ96KS9 214 aa16.28■□□□□ 0.2
FOXR1-202ENST00000531539 MSRAQ9UJ68 235 aa16.28■□□□□ 0.2
FOXR1-202ENST00000531539 VAV3Q9UKW4 847 aa16.28■□□□□ 0.2
FOXR1-202ENST00000531539 PCDHA12Q9UN75 941 aa16.28■□□□□ 0.2
FOXR1-202ENST00000531539 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.28■□□□□ 0.2
FOXR1-202ENST00000531539 CDY2AQ9Y6F7 541 aa16.28■□□□□ 0.2
FOXR1-202ENST00000531539 COL1A2P08123 1366 aa16.27■□□□□ 0.2
FOXR1-202ENST00000531539 ABHD14A-ACY1A0A1B0GW23 586 aa16.27■□□□□ 0.2
FOXR1-202ENST00000531539 ZBTB42B2RXF5 422 aa16.27■□□□□ 0.2
FOXR1-202ENST00000531539 KIF28PB7ZC32 967 aa16.27■□□□□ 0.2
FOXR1-202ENST00000531539 BAIAP3O94812 1187 aa16.27■□□□□ 0.2
FOXR1-202ENST00000531539 OATP04181 439 aa16.27■□□□□ 0.2
FOXR1-202ENST00000531539 MRPS6P82932 125 aaKnown RBP16.27■□□□□ 0.2
FOXR1-202ENST00000531539 PRKCEQ02156 737 aa16.27■□□□□ 0.2
FOXR1-202ENST00000531539 PPP2R5CQ13362 524 aa16.27■□□□□ 0.2
FOXR1-202ENST00000531539 ZNF697Q5TEC3 545 aa16.27■□□□□ 0.2
FOXR1-202ENST00000531539 KIAA0319LQ8IZA0 1049 aa16.27■□□□□ 0.2
FOXR1-202ENST00000531539 METTL13Q8N6R0 699 aa16.27■□□□□ 0.2
FOXR1-202ENST00000531539 PBX4Q9BYU1 374 aa16.27■□□□□ 0.2
FOXR1-202ENST00000531539 SEMA6BQ9H3T3 888 aa16.27■□□□□ 0.2
FOXR1-202ENST00000531539 IGSF9BQ9UPX0 1349 aa16.26■□□□□ 0.19
FOXR1-202ENST00000531539 H3BQV1 296 aa16.26■□□□□ 0.19
FOXR1-202ENST00000531539 M0QZ92 97 aa16.26■□□□□ 0.19
FOXR1-202ENST00000531539 NEMFO60524 1076 aa16.26■□□□□ 0.19
FOXR1-202ENST00000531539 SLC34A2O95436 690 aa16.26■□□□□ 0.19
FOXR1-202ENST00000531539 GHRP10912 638 aa16.26■□□□□ 0.19
FOXR1-202ENST00000531539 DNAJB2P25686 324 aa16.26■□□□□ 0.19
FOXR1-202ENST00000531539 PSMC5P62195 406 aa16.26■□□□□ 0.19
FOXR1-202ENST00000531539 MGAT3Q09327 533 aa16.26■□□□□ 0.19
FOXR1-202ENST00000531539 EPHA7Q15375 998 aa16.26■□□□□ 0.19
FOXR1-202ENST00000531539 PLEKHG4Q58EX7 1191 aa16.26■□□□□ 0.19
FOXR1-202ENST00000531539 XKR3Q5GH77 459 aa16.26■□□□□ 0.19
FOXR1-202ENST00000531539 LARP1BQ659C4 914 aaKnown RBP16.26■□□□□ 0.19
FOXR1-202ENST00000531539 TET1Q8NFU7 2136 aa16.26■□□□□ 0.19
FOXR1-202ENST00000531539 PHOSPHO2Q8TCD6 241 aa16.26■□□□□ 0.19
FOXR1-202ENST00000531539 TIFAQ96CG3 184 aa16.26■□□□□ 0.19
FOXR1-202ENST00000531539 SH2D3AQ9BRG2 576 aa16.26■□□□□ 0.19
FOXR1-202ENST00000531539 CELF4Q9BZC1 486 aaKnown RBP16.26■□□□□ 0.19
FOXR1-202ENST00000531539 TTC12Q9H892 705 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms