RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 JADE2Q9NQC1 790 aa20.36■□□□□ 0.85
PTPN11-204ENST00000531326 TUBE1Q9UJT0 475 aa20.36■□□□□ 0.85
PTPN11-204ENST00000531326 MYO7AQ13402 2215 aa20.35■□□□□ 0.85
PTPN11-204ENST00000531326 SPDYE3A6NKU9 549 aa20.35■□□□□ 0.85
PTPN11-204ENST00000531326 STXBP3O00186 592 aa20.35■□□□□ 0.85
PTPN11-204ENST00000531326 CDKL5O76039 1030 aa20.35■□□□□ 0.85
PTPN11-204ENST00000531326 SCG2P13521 617 aa20.35■□□□□ 0.85
PTPN11-204ENST00000531326 MCM2P49736 904 aa20.35■□□□□ 0.85
PTPN11-204ENST00000531326 SSRP1Q08945 709 aaKnown RBP20.35■□□□□ 0.85
PTPN11-204ENST00000531326 TIGD5Q53EQ6 642 aa20.35■□□□□ 0.85
PTPN11-204ENST00000531326 TCEAL5Q5H9L2 206 aa20.35■□□□□ 0.85
PTPN11-204ENST00000531326 CCDC83Q8IWF9 413 aa20.35■□□□□ 0.85
PTPN11-204ENST00000531326 NEK9Q8TD19 979 aa20.35■□□□□ 0.85
PTPN11-204ENST00000531326 GLG1Q92896 1179 aa20.35■□□□□ 0.85
PTPN11-204ENST00000531326 SMARCAD1Q9H4L7 1026 aa20.35■□□□□ 0.85
PTPN11-204ENST00000531326 TTC3P53804 2025 aa20.34■□□□□ 0.85
PTPN11-204ENST00000531326 ENPP3O14638 875 aa20.34■□□□□ 0.85
PTPN11-204ENST00000531326 PLA2G5P39877 138 aa20.34■□□□□ 0.85
PTPN11-204ENST00000531326 AKAP17AQ02040 695 aaKnown RBP20.34■□□□□ 0.85
PTPN11-204ENST00000531326 FBXO47Q5MNV8 452 aa20.34■□□□□ 0.85
PTPN11-204ENST00000531326 PTCRAQ6ISU1 281 aaPredicted RBP20.34■□□□□ 0.85
PTPN11-204ENST00000531326 TRIM22Q8IYM9 498 aa20.34■□□□□ 0.85
PTPN11-204ENST00000531326 FIBCD1Q8N539 461 aa20.34■□□□□ 0.85
PTPN11-204ENST00000531326 NSUN7Q8NE18 718 aaKnown RBP20.34■□□□□ 0.85
PTPN11-204ENST00000531326 TMX3Q96JJ7 454 aa20.34■□□□□ 0.85
PTPN11-204ENST00000531326 BARHL2Q9NY43 387 aa20.34■□□□□ 0.85
PTPN11-204ENST00000531326 CDY2AQ9Y6F7 541 aa20.34■□□□□ 0.85
PTPN11-204ENST00000531326 STK36Q9NRP7 1315 aa20.33■□□□□ 0.85
PTPN11-204ENST00000531326 GRXCR2A6NFK2 248 aa20.33■□□□□ 0.85
PTPN11-204ENST00000531326 C5orf67F2Z3F1 127 aa20.33■□□□□ 0.85
PTPN11-204ENST00000531326 PI4K2BG5E9Z4 385 aa20.33■□□□□ 0.85
PTPN11-204ENST00000531326 H3BQ06 376 aaPredicted RBP20.33■□□□□ 0.85
PTPN11-204ENST00000531326 hCG_1984214I3L0E3 225 aa20.33■□□□□ 0.85
PTPN11-204ENST00000531326 MAFGO15525 162 aa20.33■□□□□ 0.85
PTPN11-204ENST00000531326 FDPSP14324 419 aaKnown RBP20.33■□□□□ 0.85
PTPN11-204ENST00000531326 IGBP1P78318 339 aa20.33■□□□□ 0.85
PTPN11-204ENST00000531326 COL19A1Q14993 1142 aa20.33■□□□□ 0.85
PTPN11-204ENST00000531326 TMEM31Q5JXX7 168 aa20.33■□□□□ 0.85
PTPN11-204ENST00000531326 RSPH3Q86UC2 560 aa20.33■□□□□ 0.85
PTPN11-204ENST00000531326 ZNF713Q8N859 430 aaPredicted RBP20.33■□□□□ 0.85
PTPN11-204ENST00000531326 CYP2W1Q8TAV3 490 aa20.33■□□□□ 0.85
PTPN11-204ENST00000531326 LINC01599Q8WXQ3 324 aa20.33■□□□□ 0.85
PTPN11-204ENST00000531326 AGO3Q9H9G7 860 aaKnown RBP20.33■□□□□ 0.85
PTPN11-204ENST00000531326 ADGRA3Q8IWK6 1321 aa20.32■□□□□ 0.84
PTPN11-204ENST00000531326 LOXHD1Q8IVV2 1947 aa20.32■□□□□ 0.84
PTPN11-204ENST00000531326 FAM86C2PA6NEL3 165 aa20.32■□□□□ 0.84
PTPN11-204ENST00000531326 JAK2O60674 1132 aa20.32■□□□□ 0.84
PTPN11-204ENST00000531326 GPR37L1O60883 481 aa20.32■□□□□ 0.84
PTPN11-204ENST00000531326 DEXIO95424 95 aa20.32■□□□□ 0.84
PTPN11-204ENST00000531326 INSRRP14616 1297 aa20.32■□□□□ 0.84
PTPN11-204ENST00000531326 CTNNB1P35222 781 aa20.32■□□□□ 0.84
PTPN11-204ENST00000531326 PPP1R18Q6NYC8 613 aa20.32■□□□□ 0.84
PTPN11-204ENST00000531326 TSHZ1Q6ZSZ6 1077 aa20.32■□□□□ 0.84
PTPN11-204ENST00000531326 GJD3Q8N144 294 aa20.32■□□□□ 0.84
PTPN11-204ENST00000531326 ZNF689Q96CS4 500 aaPredicted RBP20.32■□□□□ 0.84
PTPN11-204ENST00000531326 PABPC5Q96DU9 382 aaKnown RBP20.32■□□□□ 0.84
PTPN11-204ENST00000531326 PGBD1Q96JS3 809 aa20.32■□□□□ 0.84
PTPN11-204ENST00000531326 AIFM3Q96NN9 605 aa20.32■□□□□ 0.84
PTPN11-204ENST00000531326 MXRA8Q9BRK3 442 aa20.32■□□□□ 0.84
PTPN11-204ENST00000531326 NSUN3Q9H649 340 aaKnown RBP20.32■□□□□ 0.84
PTPN11-204ENST00000531326 JPH1Q9HDC5 661 aaPredicted RBP20.32■□□□□ 0.84
PTPN11-204ENST00000531326 KCNH7Q9NS40 1196 aa20.32■□□□□ 0.84
PTPN11-204ENST00000531326 SLC9A2Q9UBY0 812 aa20.32■□□□□ 0.84
PTPN11-204ENST00000531326 BMPR1AP36894 532 aa20.31■□□□□ 0.84
PTPN11-204ENST00000531326 NAPAP54920 295 aa20.31■□□□□ 0.84
PTPN11-204ENST00000531326 MRPS6P82932 125 aaKnown RBP20.31■□□□□ 0.84
PTPN11-204ENST00000531326 CLP1Q92989 425 aaKnown RBP20.31■□□□□ 0.84
PTPN11-204ENST00000531326 LLPHQ9BRT6 129 aaKnown RBP20.31■□□□□ 0.84
PTPN11-204ENST00000531326 FAM49AQ9H0Q0 323 aaPredicted RBP20.31■□□□□ 0.84
PTPN11-204ENST00000531326 ORC3Q9UBD5 711 aaPredicted RBP20.31■□□□□ 0.84
PTPN11-204ENST00000531326 C5orf42Q9H799 3197 aa20.3■□□□□ 0.84
PTPN11-204ENST00000531326 RRN3P2A6NIE6 340 aa20.3■□□□□ 0.84
PTPN11-204ENST00000531326 GRM6O15303 877 aa20.3■□□□□ 0.84
PTPN11-204ENST00000531326 RB1P06400 928 aa20.3■□□□□ 0.84
PTPN11-204ENST00000531326 ARP10275 920 aa20.3■□□□□ 0.84
PTPN11-204ENST00000531326 CD52P31358 61 aa20.3■□□□□ 0.84
PTPN11-204ENST00000531326 RTN4RL1Q86UN2 441 aaPredicted RBP20.3■□□□□ 0.84
PTPN11-204ENST00000531326 CRIPAKQ8N1N5 446 aa20.3■□□□□ 0.84
PTPN11-204ENST00000531326 TRAPPC12Q8WVT3 735 aa20.3■□□□□ 0.84
PTPN11-204ENST00000531326 FAM122AQ96E09 287 aa20.3■□□□□ 0.84
PTPN11-204ENST00000531326 RIC8AQ9NPQ8 531 aa20.3■□□□□ 0.84
PTPN11-204ENST00000531326 NFASCO94856 1347 aa20.29■□□□□ 0.84
PTPN11-204ENST00000531326 DGKIO75912 1065 aa20.29■□□□□ 0.84
PTPN11-204ENST00000531326 LTBRP36941 435 aa20.29■□□□□ 0.84
PTPN11-204ENST00000531326 ACTR2P61160 394 aa20.29■□□□□ 0.84
PTPN11-204ENST00000531326 ITGB3BPQ13352 177 aaPredicted RBP20.29■□□□□ 0.84
PTPN11-204ENST00000531326 PLCB4Q15147 1175 aa20.29■□□□□ 0.84
PTPN11-204ENST00000531326 PUS10Q3MIT2 529 aaKnown RBP20.29■□□□□ 0.84
PTPN11-204ENST00000531326 SNX21Q969T3 373 aa20.29■□□□□ 0.84
PTPN11-204ENST00000531326 C11orf84Q9BUA3 381 aaPredicted RBP20.29■□□□□ 0.84
PTPN11-204ENST00000531326 VPS54Q9P1Q0 977 aa20.29■□□□□ 0.84
PTPN11-204ENST00000531326 KIAA1671Q9BY89 1806 aa20.29■□□□□ 0.84
PTPN11-204ENST00000531326 ESYT2A0FGR8 921 aa20.28■□□□□ 0.84
PTPN11-204ENST00000531326 SMCO2A6NFE2 343 aa20.28■□□□□ 0.84
PTPN11-204ENST00000531326 TMEM62Q0P6H9 643 aa20.28■□□□□ 0.84
PTPN11-204ENST00000531326 BTG3Q14201 252 aaPredicted RBP20.28■□□□□ 0.84
PTPN11-204ENST00000531326 EP400NLQ6ZTU2 488 aa20.28■□□□□ 0.84
PTPN11-204ENST00000531326 ANO3Q9BYT9 981 aa20.28■□□□□ 0.84
PTPN11-204ENST00000531326 ZMYND12Q9H0C1 365 aa20.28■□□□□ 0.84
PTPN11-204ENST00000531326 AZI2Q9H6S1 392 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms