RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 CETN3O15182 167 aa15.35■□□□□ 0.05
PCF11-204ENST00000530660 ATP9AO75110 1047 aa15.35■□□□□ 0.05
PCF11-204ENST00000530660 UNC5CO95185 931 aa15.35■□□□□ 0.05
PCF11-204ENST00000530660 FUT4P22083 530 aa15.35■□□□□ 0.05
PCF11-204ENST00000530660 CNGA2Q16280 664 aa15.35■□□□□ 0.05
PCF11-204ENST00000530660 FIGNQ5HY92 759 aa15.35■□□□□ 0.05
PCF11-204ENST00000530660 SOGA3Q5TF21 947 aa15.35■□□□□ 0.05
PCF11-204ENST00000530660 ZC3H18Q86VM9 953 aaKnown RBP15.35■□□□□ 0.05
PCF11-204ENST00000530660 DNAAF5Q86Y56 855 aa15.35■□□□□ 0.05
PCF11-204ENST00000530660 TBC1D16Q8TBP0 767 aa15.35■□□□□ 0.05
PCF11-204ENST00000530660 BAZ2BQ9UIF8 2168 aaKnown RBP15.34■□□□□ 0.05
PCF11-204ENST00000530660 NVLO15381 856 aaKnown RBP15.34■□□□□ 0.05
PCF11-204ENST00000530660 CNPY1Q3B7I2 92 aa15.34■□□□□ 0.05
PCF11-204ENST00000530660 RBBP8NLQ8NC74 664 aaPredicted RBP15.34■□□□□ 0.05
PCF11-204ENST00000530660 KCNH5Q8NCM2 988 aa15.34■□□□□ 0.05
PCF11-204ENST00000530660 MIPOL1Q8TD10 442 aa15.34■□□□□ 0.05
PCF11-204ENST00000530660 ZNF333Q96JL9 665 aa15.34■□□□□ 0.05
PCF11-204ENST00000530660 RAB3IPQ96QF0 476 aaPredicted RBP15.34■□□□□ 0.05
PCF11-204ENST00000530660 NLRC4Q9NPP4 1024 aa15.34■□□□□ 0.05
PCF11-204ENST00000530660 DBR1Q9UK59 544 aaKnown RBP15.34■□□□□ 0.05
PCF11-204ENST00000530660 TBX22Q9Y458 520 aa15.34■□□□□ 0.05
PCF11-204ENST00000530660 USP54Q70EL1 1684 aa15.34■□□□□ 0.05
PCF11-204ENST00000530660 KRIT1O00522 736 aa15.34■□□□□ 0.05
PCF11-204ENST00000530660 CYP1A1P04798 512 aaPredicted RBP15.34■□□□□ 0.05
PCF11-204ENST00000530660 CCNB1P14635 433 aa15.34■□□□□ 0.05
PCF11-204ENST00000530660 RASA1P20936 1047 aa15.34■□□□□ 0.05
PCF11-204ENST00000530660 NAB2Q15742 525 aa15.34■□□□□ 0.05
PCF11-204ENST00000530660 ARMCX6Q7L4S7 300 aa15.34■□□□□ 0.05
PCF11-204ENST00000530660 TTC5Q8N0Z6 440 aa15.34■□□□□ 0.05
PCF11-204ENST00000530660 EPS8L3Q8TE67 593 aaKnown RBP15.34■□□□□ 0.05
PCF11-204ENST00000530660 RNF25Q96BH1 459 aaPredicted RBP15.34■□□□□ 0.05
PCF11-204ENST00000530660 FMO2Q99518 471 aa15.34■□□□□ 0.05
PCF11-204ENST00000530660 METTL5Q9NRN9 209 aaKnown RBP15.34■□□□□ 0.05
PCF11-204ENST00000530660 ARL2BPQ9Y2Y0 163 aa15.34■□□□□ 0.05
PCF11-204ENST00000530660 AFPP02771 609 aaKnown RBP15.33■□□□□ 0.05
PCF11-204ENST00000530660 DESP17661 470 aa15.33■□□□□ 0.05
PCF11-204ENST00000530660 TARSP26639 723 aaKnown RBP15.33■□□□□ 0.05
PCF11-204ENST00000530660 EIF3BP55884 814 aaKnown RBP15.33■□□□□ 0.05
PCF11-204ENST00000530660 SFSWAPQ12872 951 aaKnown RBP15.33■□□□□ 0.05
PCF11-204ENST00000530660 RPS6KA1Q15418 735 aa15.33■□□□□ 0.05
PCF11-204ENST00000530660 CMPK2Q5EBM0 449 aa15.33■□□□□ 0.05
PCF11-204ENST00000530660 LMOD2Q6P5Q4 547 aa15.33■□□□□ 0.05
PCF11-204ENST00000530660 PTPRN2Q92932 1015 aa15.33■□□□□ 0.05
PCF11-204ENST00000530660 TRIM7Q9C029 511 aa15.33■□□□□ 0.05
PCF11-204ENST00000530660 CARD9Q9H257 536 aa15.33■□□□□ 0.05
PCF11-204ENST00000530660 CCDC134Q9H6E4 229 aa15.33■□□□□ 0.05
PCF11-204ENST00000530660 SIK3Q9Y2K2 1263 aa15.33■□□□□ 0.05
PCF11-204ENST00000530660 TACC3Q9Y6A5 838 aa15.33■□□□□ 0.05
PCF11-204ENST00000530660 E7ENQ6 273 aa15.33■□□□□ 0.04
PCF11-204ENST00000530660 CREB1P16220 341 aa15.33■□□□□ 0.04
PCF11-204ENST00000530660 MCM7P33993 719 aa15.33■□□□□ 0.04
PCF11-204ENST00000530660 ARID5AQ03989 594 aa15.33■□□□□ 0.04
PCF11-204ENST00000530660 TTC38Q5R3I4 469 aa15.33■□□□□ 0.04
PCF11-204ENST00000530660 HGSNATQ68CP4 663 aa15.33■□□□□ 0.04
PCF11-204ENST00000530660 OTUD6AQ7L8S5 288 aa15.33■□□□□ 0.04
PCF11-204ENST00000530660 ARL10Q8N8L6 244 aa15.33■□□□□ 0.04
PCF11-204ENST00000530660 ATP8A2Q9NTI2 1148 aa15.33■□□□□ 0.04
PCF11-204ENST00000530660 MBD4O95243 580 aa15.33■□□□□ 0.04
PCF11-204ENST00000530660 GCP02774 474 aa15.33■□□□□ 0.04
PCF11-204ENST00000530660 UBTFL6P0CB48 400 aaPredicted RBP15.33■□□□□ 0.04
PCF11-204ENST00000530660 ZCCHC18P0CG32 403 aa15.33■□□□□ 0.04
PCF11-204ENST00000530660 SLC29A2Q14542 456 aa15.33■□□□□ 0.04
PCF11-204ENST00000530660 SEPT14Q6ZU15 432 aa15.33■□□□□ 0.04
PCF11-204ENST00000530660 HAO1Q9UJM8 370 aa15.33■□□□□ 0.04
PCF11-204ENST00000530660 NOC2LQ9Y3T9 749 aaKnown RBP15.33■□□□□ 0.04
PCF11-204ENST00000530660 ARFGEF2Q9Y6D5 1785 aa15.33■□□□□ 0.04
PCF11-204ENST00000530660 FOXO6A8MYZ6 492 aa15.32■□□□□ 0.04
PCF11-204ENST00000530660 BHMG1C9JSJ3 638 aaPredicted RBP15.32■□□□□ 0.04
PCF11-204ENST00000530660 IDH1O75874 414 aaKnown RBP15.32■□□□□ 0.04
PCF11-204ENST00000530660 GJB6O95452 261 aa15.32■□□□□ 0.04
PCF11-204ENST00000530660 GSTA2P09210 222 aa15.32■□□□□ 0.04
PCF11-204ENST00000530660 DZIP3Q86Y13 1208 aaKnown RBP15.32■□□□□ 0.04
PCF11-204ENST00000530660 GDAP1Q8TB36 358 aa15.32■□□□□ 0.04
PCF11-204ENST00000530660 BAP1Q92560 729 aa15.32■□□□□ 0.04
PCF11-204ENST00000530660 PGM2Q96G03 612 aa15.32■□□□□ 0.04
PCF11-204ENST00000530660 ETNK2Q9NVF9 386 aa15.32■□□□□ 0.04
PCF11-204ENST00000530660 INTUQ9ULD6 942 aa15.32■□□□□ 0.04
PCF11-204ENST00000530660 IQSEC3Q9UPP2 1182 aaPredicted RBP15.32■□□□□ 0.04
PCF11-204ENST00000530660 MYH4Q9Y623 1939 aa15.32■□□□□ 0.04
PCF11-204ENST00000530660 SPEF2Q9C093 1822 aa15.32■□□□□ 0.04
PCF11-204ENST00000530660 CIAO1O76071 339 aa15.32■□□□□ 0.04
PCF11-204ENST00000530660 EPHB2P29323 1055 aa15.32■□□□□ 0.04
PCF11-204ENST00000530660 ADD2P35612 726 aa15.32■□□□□ 0.04
PCF11-204ENST00000530660 MCAMP43121 646 aa15.32■□□□□ 0.04
PCF11-204ENST00000530660 CD151P48509 253 aa15.32■□□□□ 0.04
PCF11-204ENST00000530660 ZSCAN29Q8IWY8 852 aaPredicted RBP15.32■□□□□ 0.04
PCF11-204ENST00000530660 AZIN2Q96A70 460 aa15.32■□□□□ 0.04
PCF11-204ENST00000530660 ZMYND12Q9H0C1 365 aa15.32■□□□□ 0.04
PCF11-204ENST00000530660 LRCH1Q9Y2L9 728 aa15.32■□□□□ 0.04
PCF11-204ENST00000530660 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.32■□□□□ 0.04
PCF11-204ENST00000530660 PP2D1A8MPX8 630 aa15.32■□□□□ 0.04
PCF11-204ENST00000530660 TJP3O95049 919 aa15.32■□□□□ 0.04
PCF11-204ENST00000530660 EIF4BP23588 611 aaKnown RBP15.32■□□□□ 0.04
PCF11-204ENST00000530660 CEP128Q6ZU80 1094 aa15.32■□□□□ 0.04
PCF11-204ENST00000530660 ECHDC2Q86YB7 292 aa15.32■□□□□ 0.04
PCF11-204ENST00000530660 HPS3Q969F9 1004 aa15.32■□□□□ 0.04
PCF11-204ENST00000530660 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.32■□□□□ 0.04
PCF11-204ENST00000530660 ZBTB3Q9H5J0 574 aa15.32■□□□□ 0.04
PCF11-204ENST00000530660 DENND2DQ9H6A0 471 aaPredicted RBP15.32■□□□□ 0.04
PCF11-204ENST00000530660 SIGLEC16A6NMB1 481 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms