RNA–Protein interactions for RNA: ENST00000530548.5

PPFIA1-215, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 2

Gene PPFIA1, Length 3,774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-215ENST00000530548 RIPK3Q9Y572 518 aa8.55□□□□□ -1.04
PPFIA1-215ENST00000530548 TJP1Q07157 1748 aa8.54□□□□□ -1.04
PPFIA1-215ENST00000530548 KLRG2A4D1S0 409 aaPredicted RBP8.54□□□□□ -1.04
PPFIA1-215ENST00000530548 INO80B-WBP1J3KQ70 363 aa8.54□□□□□ -1.04
PPFIA1-215ENST00000530548 NKRFO15226 690 aaKnown RBP eCLIP8.54□□□□□ -1.04
PPFIA1-215ENST00000530548 LIG4P49917 911 aa8.54□□□□□ -1.04
PPFIA1-215ENST00000530548 TRIM14Q14142 442 aa8.54□□□□□ -1.04
PPFIA1-215ENST00000530548 CLMNQ96JQ2 1002 aa8.54□□□□□ -1.04
PPFIA1-215ENST00000530548 C7orf25Q9BPX7 421 aa8.54□□□□□ -1.04
PPFIA1-215ENST00000530548 INO80BQ9C086 356 aaPredicted RBP8.54□□□□□ -1.04
PPFIA1-215ENST00000530548 BCCIPQ9P287 314 aaKnown RBP eCLIP8.54□□□□□ -1.047e-7■■■■■ 59.6
PPFIA1-215ENST00000530548 SNED1Q8TER0 1413 aa8.54□□□□□ -1.04
PPFIA1-215ENST00000530548 AKAP11Q9UKA4 1901 aa8.54□□□□□ -1.04
PPFIA1-215ENST00000530548 CEP104O60308 925 aa8.54□□□□□ -1.04
PPFIA1-215ENST00000530548 KIF11P52732 1056 aa8.54□□□□□ -1.04
PPFIA1-215ENST00000530548 TGFB2P61812 414 aa8.54□□□□□ -1.04
PPFIA1-215ENST00000530548 STRN3Q13033 797 aa8.54□□□□□ -1.04
PPFIA1-215ENST00000530548 DMP1Q13316 513 aaPredicted RBP8.54□□□□□ -1.04
PPFIA1-215ENST00000530548 MKRN4PQ13434 485 aaPredicted RBP8.54□□□□□ -1.04
PPFIA1-215ENST00000530548 TTI2Q6NXR4 508 aa8.54□□□□□ -1.04
PPFIA1-215ENST00000530548 GBP6Q6ZN66 633 aa8.54□□□□□ -1.04
PPFIA1-215ENST00000530548 GUF1Q8N442 669 aaKnown RBP8.54□□□□□ -1.04
PPFIA1-215ENST00000530548 LRRC15Q8TF66 581 aa8.54□□□□□ -1.04
PPFIA1-215ENST00000530548 NUP58Q9BVL2 599 aa8.54□□□□□ -1.04
PPFIA1-215ENST00000530548 APOL6Q9BWW8 343 aa8.54□□□□□ -1.04
PPFIA1-215ENST00000530548 ARFGAP3Q9NP61 516 aa8.54□□□□□ -1.04
PPFIA1-215ENST00000530548 ZHX1Q9UKY1 873 aaPredicted RBP8.54□□□□□ -1.04
PPFIA1-215ENST00000530548 NUP188Q5SRE5 1749 aa8.54□□□□□ -1.04
PPFIA1-215ENST00000530548 DCAF8L1A6NGE4 600 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 WDR46O15213 610 aaKnown RBP8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 ERLIN1O75477 346 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 QARSP47897 775 aaKnown RBP8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 IREB2P48200 963 aaKnown RBP8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 FXR2P51116 673 aaKnown RBP eCLIP8.53□□□□□ -1.049e-8■■■■■ 31.4
PPFIA1-215ENST00000530548 SF3A3Q12874 501 aaKnown RBP eCLIP8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 KNOP1Q1ED39 458 aaKnown RBP8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 DPP9Q86TI2 863 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 GMCL1Q96IK5 515 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 MAP7D2Q96T17 732 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 PSMD1Q99460 953 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 WDR18Q9BV38 432 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 MAGEF1Q9HAY2 307 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 CRYBG1Q9Y4K1 1723 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 BTAF1O14981 1849 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 PVALEFA0A1B0GWK0 134 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 AFPP02771 609 aaKnown RBP8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 ZNF18P17022 549 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 PPP1R2P41236 205 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 BACE1P56817 501 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 ERVK-24P63145 666 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 ZBED6P86452 979 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 MTMR9Q96QG7 549 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 DUSP9Q99956 384 aaKnown RBP8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 UBE2TQ9NPD8 197 aaPredicted RBP8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 USTQ9Y2C2 406 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 CICQ96RK0 1608 aaPredicted RBP8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 DENND3A2RUS2 1198 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 ATP9AO75110 1047 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 RPA1P27694 616 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 CNGA1P29973 690 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 CCND2P30279 289 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 STAT1P42224 750 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 KCNB1Q14721 858 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 RINT1Q6NUQ1 792 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 TATDN1Q6P1N9 297 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 OTUD6AQ7L8S5 288 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 SH3RF1Q7Z6J0 888 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 THNSL1Q8IYQ7 743 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 NSUN6Q8TEA1 469 aaKnown RBP8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 HSD3B7Q9H2F3 369 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 CTTNBP2NLQ9P2B4 639 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 MYH3P11055 1940 aa8.53□□□□□ -1.04
PPFIA1-215ENST00000530548 SMIM23A6NLE4 172 aa8.52□□□□□ -1.04
PPFIA1-215ENST00000530548 ZNF185O15231 689 aa8.52□□□□□ -1.04
PPFIA1-215ENST00000530548 KLRC4O43908 158 aa8.52□□□□□ -1.04
PPFIA1-215ENST00000530548 CTNND1O60716 968 aaKnown RBP8.52□□□□□ -1.04
PPFIA1-215ENST00000530548 LMNB1P20700 586 aa8.52□□□□□ -1.04
PPFIA1-215ENST00000530548 YWHABP31946 246 aaKnown RBP8.52□□□□□ -1.04
PPFIA1-215ENST00000530548 SLC7A5Q01650 507 aa8.52□□□□□ -1.04
PPFIA1-215ENST00000530548 LRRC63Q05C16 580 aa8.52□□□□□ -1.04
PPFIA1-215ENST00000530548 NCBP1Q09161 790 aaKnown RBP8.52□□□□□ -1.04
PPFIA1-215ENST00000530548 APOBEC3FQ8IUX4 373 aaKnown RBP8.52□□□□□ -1.04
PPFIA1-215ENST00000530548 DHX37Q8IY37 1157 aaKnown RBP8.52□□□□□ -1.04
PPFIA1-215ENST00000530548 SYTL5Q8TDW5 730 aaPredicted RBP8.52□□□□□ -1.04
PPFIA1-215ENST00000530548 MXRA8Q9BRK3 442 aa8.52□□□□□ -1.04
PPFIA1-215ENST00000530548 SAR1BQ9Y6B6 198 aa8.52□□□□□ -1.04
PPFIA1-215ENST00000530548 KCNK3O14649 394 aa8.52□□□□□ -1.05
PPFIA1-215ENST00000530548 EPHB6O15197 1021 aa8.52□□□□□ -1.05
PPFIA1-215ENST00000530548 CD19P15391 556 aa8.52□□□□□ -1.05
PPFIA1-215ENST00000530548 PSMC2P35998 433 aaKnown RBP8.52□□□□□ -1.05
PPFIA1-215ENST00000530548 SREBF1P36956 1147 aa8.52□□□□□ -1.05
PPFIA1-215ENST00000530548 GSPT2Q8IYD1 628 aaKnown RBP8.52□□□□□ -1.05
PPFIA1-215ENST00000530548 SCYL3Q8IZE3 742 aa8.52□□□□□ -1.05
PPFIA1-215ENST00000530548 LRRC71Q8N4P6 559 aa8.52□□□□□ -1.05
PPFIA1-215ENST00000530548 SCFD1Q8WVM8 642 aa8.52□□□□□ -1.05
PPFIA1-215ENST00000530548 SLC7A3Q8WY07 619 aa8.52□□□□□ -1.05
PPFIA1-215ENST00000530548 P2RX7Q99572 595 aaKnown RBP8.52□□□□□ -1.05
PPFIA1-215ENST00000530548 FAM213AQ9BRX8 229 aa8.52□□□□□ -1.05
PPFIA1-215ENST00000530548 TEX13BQ9BXU2 312 aa8.52□□□□□ -1.05
PPFIA1-215ENST00000530548 FAM49AQ9H0Q0 323 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms