RNA–Protein interactions for RNA: ENST00000530304.5

PCF11-203, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 1 (best)

Gene PCF11, Length 2,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-203ENST00000530304 AKAP3O75969 853 aa21.32■■□□□ 1
PCF11-203ENST00000530304 SNAP25P60880 206 aa21.32■■□□□ 1
PCF11-203ENST00000530304 DCAF17Q5H9S7 520 aaPredicted RBP21.32■■□□□ 1
PCF11-203ENST00000530304 KLHL7Q8IXQ5 586 aa21.32■■□□□ 1
PCF11-203ENST00000530304 MREGQ8N565 214 aa21.32■■□□□ 1
PCF11-203ENST00000530304 SH2D3CQ8N5H7 860 aa21.32■■□□□ 1
PCF11-203ENST00000530304 PIK3R5Q8WYR1 880 aa21.32■■□□□ 1
PCF11-203ENST00000530304 NAGPAQ9UK23 515 aa21.32■■□□□ 1
PCF11-203ENST00000530304 LRRC37AA6NMS7 1700 aa21.32■■□□□ 1
PCF11-203ENST00000530304 POLRMTO00411 1230 aaKnown RBP21.31■■□□□ 1
PCF11-203ENST00000530304 CES2O00748 559 aa21.31■■□□□ 1
PCF11-203ENST00000530304 PDXKO00764 312 aa21.31■■□□□ 1
PCF11-203ENST00000530304 NOP2P46087 812 aaKnown RBP21.31■■□□□ 1
PCF11-203ENST00000530304 TNNC1P63316 161 aa21.31■■□□□ 1
PCF11-203ENST00000530304 Q4G0T1 1027 aa21.31■■□□□ 1
PCF11-203ENST00000530304 LENG9Q96B70 501 aa21.31■■□□□ 1
PCF11-203ENST00000530304 GOLPH3Q9H4A6 298 aa21.31■■□□□ 1
PCF11-203ENST00000530304 UBR3Q6ZT12 1888 aa21.31■■□□□ 1
PCF11-203ENST00000530304 FAM86B1E9PN63 330 aa21.31■■□□□ 1
PCF11-203ENST00000530304 TBX3O15119 743 aa21.31■■□□□ 1
PCF11-203ENST00000530304 FAM86B2P0C5J1 330 aa21.31■■□□□ 1
PCF11-203ENST00000530304 CLSTN1O94985 981 aa21.3■■□□□ 1
PCF11-203ENST00000530304 KIF4AO95239 1232 aa21.3■■□□□ 1
PCF11-203ENST00000530304 ALKBH5Q6P6C2 394 aaKnown RBP21.3■■□□□ 1
PCF11-203ENST00000530304 WHAMMQ8TF30 809 aa21.3■■□□□ 1
PCF11-203ENST00000530304 NYAP2Q9P242 653 aa21.3■■□□□ 1
PCF11-203ENST00000530304 RSPH10B2B2RC85 870 aa21.3■■□□□ 1
PCF11-203ENST00000530304 EBAG9O00559 213 aa21.3■■□□□ 1
PCF11-203ENST00000530304 RSPH10BP0C881 870 aa21.3■■□□□ 1
PCF11-203ENST00000530304 CACNB3P54284 484 aa21.3■■□□□ 1
PCF11-203ENST00000530304 TCP10Q12799 353 aa21.3■■□□□ 1
PCF11-203ENST00000530304 EPHA7Q15375 998 aa21.3■■□□□ 1
PCF11-203ENST00000530304 CERKLQ49MI3 558 aaPredicted RBP21.3■■□□□ 1
PCF11-203ENST00000530304 POLD4Q9HCU8 107 aa21.3■■□□□ 1
PCF11-203ENST00000530304 TOM1O60784 492 aa21.29■■□□□ 1
PCF11-203ENST00000530304 SF3B2Q13435 895 aaKnown RBP21.29■■□□□ 1
PCF11-203ENST00000530304 TCERG1LQ5VWI1 586 aa21.29■■□□□ 1
PCF11-203ENST00000530304 SIAH1Q8IUQ4 282 aa21.29■■□□□ 1
PCF11-203ENST00000530304 LRRC57Q8N9N7 239 aa21.29■■□□□ 1
PCF11-203ENST00000530304 AMNQ9BXJ7 453 aa21.29■■□□□ 1
PCF11-203ENST00000530304 BCAS3Q9H6U6 928 aa21.29■■□□□ 1
PCF11-203ENST00000530304 SHTN1A0MZ66 631 aa21.29■■□□□ 1
PCF11-203ENST00000530304 A6NNZ2 444 aa21.29■■□□□ 1
PCF11-203ENST00000530304 NR3C1P04150 777 aa21.29■■□□□ 1
PCF11-203ENST00000530304 PRKCIP41743 596 aa21.29■■□□□ 1
PCF11-203ENST00000530304 CASP4P49662 377 aa21.29■■□□□ 1
PCF11-203ENST00000530304 CYP4A11Q02928 519 aa21.29■■□□□ 1
PCF11-203ENST00000530304 IFI16Q16666 785 aaKnown RBP21.29■■□□□ 1
PCF11-203ENST00000530304 TUBB8Q3ZCM7 444 aa21.29■■□□□ 1
PCF11-203ENST00000530304 USH1GQ495M9 461 aa21.29■■□□□ 1
PCF11-203ENST00000530304 EFCAB13Q8IY85 973 aa21.29■■□□□ 1
PCF11-203ENST00000530304 PBKQ96KB5 322 aa21.29■■□□□ 1
PCF11-203ENST00000530304 TYW1Q9NV66 732 aaKnown RBP21.29■■□□□ 1
PCF11-203ENST00000530304 ASTN1O14525 1302 aa21.28■■□□□ 1
PCF11-203ENST00000530304 SPDYE3A6NKU9 549 aa21.28■■□□□ 1
PCF11-203ENST00000530304 CRKP46108 304 aa21.28■■□□□ 1
PCF11-203ENST00000530304 ATP1A2P50993 1020 aa21.28■■□□□ 1
PCF11-203ENST00000530304 PDCLQ13371 301 aa21.28■■□□□ 1
PCF11-203ENST00000530304 PTPROQ16827 1216 aa21.28■■□□□ 1
PCF11-203ENST00000530304 CD302Q8IX05 232 aa21.28■■□□□ 1
PCF11-203ENST00000530304 SCFD2Q8WU76 684 aa21.28■■□□□ 1
PCF11-203ENST00000530304 PPM1EQ8WY54 764 aa21.28■■□□□ 1
PCF11-203ENST00000530304 BHMT2Q9H2M3 363 aa21.28■■□□□ 1
PCF11-203ENST00000530304 AJAP1Q9UKB5 411 aaPredicted RBP21.28■■□□□ 1
PCF11-203ENST00000530304 KIF13BQ9NQT8 1826 aa21.28■■□□□ 1
PCF11-203ENST00000530304 CEP104O60308 925 aa21.28■■□□□ 1
PCF11-203ENST00000530304 FLOT1O75955 427 aa21.28■■□□□ 1
PCF11-203ENST00000530304 BMT2Q1RMZ1 405 aa21.28■■□□□ 1
PCF11-203ENST00000530304 ACTRT1Q8TDG2 376 aa21.28■■□□□ 1
PCF11-203ENST00000530304 FAM20AQ96MK3 541 aa21.28■■□□□ 1
PCF11-203ENST00000530304 TAF1DQ9H5J8 278 aaPredicted RBP21.28■■□□□ 1
PCF11-203ENST00000530304 METTL14Q9HCE5 456 aaKnown RBP21.28■■□□□ 1
PCF11-203ENST00000530304 SIX2Q9NPC8 291 aa21.28■■□□□ 1
PCF11-203ENST00000530304 DDTLA6NHG4 134 aaPredicted RBP21.27■■□□□ 1
PCF11-203ENST00000530304 MSH4O15457 936 aa21.27■■□□□ 1
PCF11-203ENST00000530304 GCNT3O95395 438 aa21.27■■□□□ 1
PCF11-203ENST00000530304 RPL13P26373 211 aaKnown RBP21.27■■□□□ 1
PCF11-203ENST00000530304 SREBF1P36956 1147 aa21.27■■□□□ 1
PCF11-203ENST00000530304 KCNA1Q09470 495 aa21.27■■□□□ 1
PCF11-203ENST00000530304 SLC35C1Q96A29 364 aa21.27■■□□□ 1
PCF11-203ENST00000530304 PCDHAC2Q9Y5I4 1007 aa21.27■■□□□ 1
PCF11-203ENST00000530304 F5H6K3 240 aa21.27■■□□□ 1
PCF11-203ENST00000530304 CLIC2O15247 247 aa21.27■■□□□ 1
PCF11-203ENST00000530304 JAM2P57087 298 aa21.27■■□□□ 1
PCF11-203ENST00000530304 KLRC3Q07444 240 aa21.27■■□□□ 1
PCF11-203ENST00000530304 MCTP2Q6DN12 878 aa21.27■■□□□ 1
PCF11-203ENST00000530304 FBXO11Q86XK2 927 aa21.27■■□□□ 1
PCF11-203ENST00000530304 TPCN2Q8NHX9 752 aa21.27■■□□□ 1
PCF11-203ENST00000530304 RUSC1Q9BVN2 902 aa21.27■■□□□ 1
PCF11-203ENST00000530304 FAM107BQ9H098 131 aa21.27■■□□□ 1
PCF11-203ENST00000530304 ISCUQ9H1K1 167 aa21.27■■□□□ 1
PCF11-203ENST00000530304 GCNT4Q9P109 453 aa21.27■■□□□ 1
PCF11-203ENST00000530304 FBXL5Q9UKA1 691 aa21.27■■□□□ 1
PCF11-203ENST00000530304 STK24Q9Y6E0 443 aa21.27■■□□□ 1
PCF11-203ENST00000530304 G3V3G9 751 aa21.26■□□□□ 0.99
PCF11-203ENST00000530304 ERVK-9P63128 1117 aa21.26■□□□□ 0.99
PCF11-203ENST00000530304 DCAF8Q5TAQ9 597 aa21.26■□□□□ 0.99
PCF11-203ENST00000530304 GJB7Q6PEY0 223 aa21.26■□□□□ 0.99
PCF11-203ENST00000530304 CYP2W1Q8TAV3 490 aa21.26■□□□□ 0.99
PCF11-203ENST00000530304 PI4KBQ9UBF8 816 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms