RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 RWDD2AQ9UIY3 292 aa9.14□□□□□ -0.95
CTNND1-225ENST00000530094 MMP1P03956 469 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 PDE1BQ01064 536 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 IL9RQ01113 521 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 ARHGEF18Q6ZSZ5 1173 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 DHX38Q92620 1227 aaKnown RBP9.13□□□□□ -0.95
CTNND1-225ENST00000530094 COG7P83436 770 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 SNRNP48Q6IEG0 339 aaKnown RBP9.13□□□□□ -0.95
CTNND1-225ENST00000530094 TTBK2Q6IQ55 1244 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 TBC1D10CQ8IV04 446 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 TTC39CQ8N584 583 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 NEK9Q8TD19 979 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 CEP95Q96GE4 821 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 MED4Q9NPJ6 270 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 SCINQ9Y6U3 715 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 BUB1O43683 1085 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 HMGCS2P54868 508 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 TGFB2P61812 414 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 NAA25Q14CX7 972 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 RNF207Q6ZRF8 634 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.13□□□□□ -0.95
CTNND1-225ENST00000530094 LIFRP42702 1097 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 MMEL1Q495T6 779 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 PRPF38AQ8NAV1 312 aaKnown RBP9.13□□□□□ -0.95
CTNND1-225ENST00000530094 FAM149B1Q96BN6 582 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 PPP1R12CQ9BZL4 782 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 ZNF70Q9UC06 446 aaPredicted RBP9.13□□□□□ -0.95
CTNND1-225ENST00000530094 DIS3Q9Y2L1 958 aaKnown RBP9.13□□□□□ -0.95
CTNND1-225ENST00000530094 SYNJ2BP-COX16A0A087WUM0 186 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 PRPSAP2O60256 369 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 KRT1P04264 644 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 IFNAR1P17181 557 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 KYAT1Q16773 422 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 PDXDC2PQ6P474 469 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 DSTYKQ6XUX3 929 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 RAPH1Q70E73 1250 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 DGKHQ86XP1 1220 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 NSUN4Q96CB9 384 aaKnown RBP9.13□□□□□ -0.95
CTNND1-225ENST00000530094 TMEM47Q9BQJ4 181 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 TUBB6Q9BUF5 446 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 EFCC1Q9HA90 598 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 MYOZ2Q9NPC6 264 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 COX16Q9P0S2 106 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 SUGT1Q9Y2Z0 365 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 CLIC4Q9Y696 253 aa9.13□□□□□ -0.95
CTNND1-225ENST00000530094 ABCB11O95342 1321 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 NEDD4P46934 1319 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 ARHGAP42A6NI28 874 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 CSPG5O95196 566 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 CELF2O95319 508 aaKnown RBP9.12□□□□□ -0.95
CTNND1-225ENST00000530094 SLFN14P0C7P3 912 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 NDUFA8P51970 172 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 TFAMQ00059 246 aaKnown RBP9.12□□□□□ -0.95
CTNND1-225ENST00000530094 LRRC63Q05C16 580 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 KAZNQ674X7 775 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 URGCPQ8TCY9 931 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 PARD3BQ8TEW8 1205 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 PSPC1Q8WXF1 523 aaKnown RBP9.12□□□□□ -0.95
CTNND1-225ENST00000530094 IGSF3O75054 1194 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 ACTN1P12814 892 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 HUNKP57058 714 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 CCDC170Q8IYT3 715 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 TOPORSQ9NS56 1045 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-225ENST00000530094 PXDNQ92626 1479 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 SART1O43290 800 aaKnown RBP9.12□□□□□ -0.95
CTNND1-225ENST00000530094 PLEKHA8P1O95397 391 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 ECEL1O95672 775 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 GUCY2FP51841 1108 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 MESDQ14696 234 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 STXBP2Q15833 593 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 MTERF2Q49AM1 385 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 KRT39Q6A163 491 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 GBP7Q8N8V2 638 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-225ENST00000530094 MCPH1Q8NEM0 835 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 MGARPQ8TDB4 240 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 ATP6V1E2Q96A05 226 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 KDM6AO15550 1401 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-225ENST00000530094 ARHGEF28Q8N1W1 1705 aaKnown RBP9.12□□□□□ -0.95
CTNND1-225ENST00000530094 MYL3P08590 195 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 KLRK1P26718 216 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 OAS2P29728 719 aaKnown RBP9.12□□□□□ -0.95
CTNND1-225ENST00000530094 KCTD6Q8NC69 237 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 STAG1Q8WVM7 1258 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 ATP6V0A4Q9HBG4 840 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 UBN1Q9NPG3 1134 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 TBC1D22BQ9NU19 505 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 FANCLQ9NW38 375 aa9.12□□□□□ -0.95
CTNND1-225ENST00000530094 TXNDC9O14530 226 aa9.11□□□□□ -0.95
CTNND1-225ENST00000530094 AKR1B1P15121 316 aa9.11□□□□□ -0.95
CTNND1-225ENST00000530094 PHKA2P46019 1235 aa9.11□□□□□ -0.95
CTNND1-225ENST00000530094 RCAN1P53805 252 aa9.11□□□□□ -0.95
CTNND1-225ENST00000530094 C1orf228Q6PIY5 440 aa9.11□□□□□ -0.95
CTNND1-225ENST00000530094 POTEAQ6S8J7 498 aa9.11□□□□□ -0.95
CTNND1-225ENST00000530094 PPP1R16BQ96T49 567 aa9.11□□□□□ -0.95
CTNND1-225ENST00000530094 MSTO1Q9BUK6 570 aa9.11□□□□□ -0.95
CTNND1-225ENST00000530094 C2orf40Q9H1Z8 148 aa9.11□□□□□ -0.95
CTNND1-225ENST00000530094 TLK1Q9UKI8 766 aa9.11□□□□□ -0.95
CTNND1-225ENST00000530094 UBR1Q8IWV7 1749 aa9.11□□□□□ -0.95
CTNND1-225ENST00000530094 SERPING1P05155 500 aa9.11□□□□□ -0.95
CTNND1-225ENST00000530094 PLA2G4BP0C869 781 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms