RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 ABHD8Q96I13 439 aa6.73□□□□□ -1.33
AMBRA1-209ENST00000529963 CCDC140Q96MF4 163 aa6.73□□□□□ -1.33
AMBRA1-209ENST00000529963 DHRS4Q9BTZ2 278 aa6.73□□□□□ -1.33
AMBRA1-209ENST00000529963 GPR160Q9UJ42 338 aa6.73□□□□□ -1.33
AMBRA1-209ENST00000529963 MRPS23Q9Y3D9 190 aaKnown RBP6.73□□□□□ -1.33
AMBRA1-209ENST00000529963 C4AP0C0L4 1744 aa6.73□□□□□ -1.33
AMBRA1-209ENST00000529963 PCNTO95613 3336 aa6.73□□□□□ -1.33
AMBRA1-209ENST00000529963 USP42Q9H9J4 1324 aaKnown RBP6.73□□□□□ -1.33
AMBRA1-209ENST00000529963 COL5A3P25940 1745 aaPredicted RBP6.72□□□□□ -1.33
AMBRA1-209ENST00000529963 MEFVO15553 781 aaPredicted RBP6.72□□□□□ -1.33
AMBRA1-209ENST00000529963 IL13P35225 146 aa6.72□□□□□ -1.33
AMBRA1-209ENST00000529963 KIR2DL1P43626 348 aaPredicted RBP6.72□□□□□ -1.33
AMBRA1-209ENST00000529963 KIR2DL2P43627 348 aaPredicted RBP6.72□□□□□ -1.33
AMBRA1-209ENST00000529963 MAP4K2Q12851 820 aa6.72□□□□□ -1.33
AMBRA1-209ENST00000529963 HLA-DQA1Q5Y7H0 255 aa6.72□□□□□ -1.33
AMBRA1-209ENST00000529963 CYP2R1Q6VVX0 501 aa6.72□□□□□ -1.33
AMBRA1-209ENST00000529963 CBLL1Q75N03 491 aa6.72□□□□□ -1.33
AMBRA1-209ENST00000529963 SCUBE1Q8IWY4 988 aa6.72□□□□□ -1.33
AMBRA1-209ENST00000529963 OXR1Q8N573 874 aa6.72□□□□□ -1.33
AMBRA1-209ENST00000529963 IPO9Q96P70 1041 aaKnown RBP6.72□□□□□ -1.33
AMBRA1-209ENST00000529963 FANCLQ9NW38 375 aa6.72□□□□□ -1.33
AMBRA1-209ENST00000529963 IMPACTQ9P2X3 320 aa6.72□□□□□ -1.33
AMBRA1-209ENST00000529963 GULP1Q9UBP9 304 aa6.72□□□□□ -1.33
AMBRA1-209ENST00000529963 SRP68Q9UHB9 627 aaKnown RBP6.72□□□□□ -1.33
AMBRA1-209ENST00000529963 TRAF6Q9Y4K3 522 aa6.72□□□□□ -1.33
AMBRA1-209ENST00000529963 TNRC6CQ9HCJ0 1690 aaKnown RBP6.72□□□□□ -1.33
AMBRA1-209ENST00000529963 N4BP2Q86UW6 1770 aaPredicted RBP6.71□□□□□ -1.33
AMBRA1-209ENST00000529963 TLDC2A0PJX2 215 aa6.71□□□□□ -1.33
AMBRA1-209ENST00000529963 C7orf72A4D263 438 aa6.71□□□□□ -1.33
AMBRA1-209ENST00000529963 FITM1A5D6W6 292 aa6.71□□□□□ -1.33
AMBRA1-209ENST00000529963 PPP1R12AO14974 1030 aaPredicted RBP6.71□□□□□ -1.33
AMBRA1-209ENST00000529963 SMARCA5O60264 1052 aaPredicted RBP6.71□□□□□ -1.33
AMBRA1-209ENST00000529963 PPP1R11O60927 126 aaPredicted RBP6.71□□□□□ -1.33
AMBRA1-209ENST00000529963 MSL3P1P0C860 447 aa6.71□□□□□ -1.33
AMBRA1-209ENST00000529963 TACR1P25103 407 aa6.71□□□□□ -1.33
AMBRA1-209ENST00000529963 CBX2Q14781 532 aaPredicted RBP6.71□□□□□ -1.33
AMBRA1-209ENST00000529963 C21orf62-AS1Q17RA5 79 aa6.71□□□□□ -1.33
AMBRA1-209ENST00000529963 DALRD3Q5D0E6 543 aaKnown RBP6.71□□□□□ -1.33
AMBRA1-209ENST00000529963 SPPL2CQ8IUH8 684 aa6.71□□□□□ -1.33
AMBRA1-209ENST00000529963 ZSWIM2Q8NEG5 633 aa6.71□□□□□ -1.33
AMBRA1-209ENST00000529963 DIO2Q92813 273 aa6.71□□□□□ -1.33
AMBRA1-209ENST00000529963 KISS1RQ969F8 398 aaPredicted RBP6.71□□□□□ -1.33
AMBRA1-209ENST00000529963 CCDC120Q96HB5 630 aa6.71□□□□□ -1.33
AMBRA1-209ENST00000529963 SLC52A2Q9HAB3 445 aa6.71□□□□□ -1.33
AMBRA1-209ENST00000529963 RWDD3Q9Y3V2 267 aa6.71□□□□□ -1.33
AMBRA1-209ENST00000529963 TAF6LQ9Y6J9 622 aa6.71□□□□□ -1.33
AMBRA1-209ENST00000529963 KIAA1551Q9HCM1 1747 aa6.71□□□□□ -1.34
AMBRA1-209ENST00000529963 MSCO60682 206 aa6.71□□□□□ -1.34
AMBRA1-209ENST00000529963 RAC2P15153 192 aa6.71□□□□□ -1.34
AMBRA1-209ENST00000529963 PRKCAP17252 672 aa6.71□□□□□ -1.34
AMBRA1-209ENST00000529963 KCNA3P22001 575 aa6.71□□□□□ -1.34
AMBRA1-209ENST00000529963 CHRNEQ04844 493 aa6.71□□□□□ -1.34
AMBRA1-209ENST00000529963 DDR1Q08345 913 aa6.71□□□□□ -1.34
AMBRA1-209ENST00000529963 TMEM67Q5HYA8 995 aa6.71□□□□□ -1.34
AMBRA1-209ENST00000529963 RCBTB1Q8NDN9 531 aa6.71□□□□□ -1.34
AMBRA1-209ENST00000529963 NUP43Q8NFH3 380 aa6.71□□□□□ -1.34
AMBRA1-209ENST00000529963 ABHD4Q8TB40 342 aa6.71□□□□□ -1.34
AMBRA1-209ENST00000529963 KIRREL1Q96J84 757 aa6.71□□□□□ -1.34
AMBRA1-209ENST00000529963 RNF32Q9H0A6 362 aa6.71□□□□□ -1.34
AMBRA1-209ENST00000529963 FBXL7Q9UJT9 491 aa6.71□□□□□ -1.34
AMBRA1-209ENST00000529963 MYH14Q7Z406 1995 aaKnown RBP6.7□□□□□ -1.34
AMBRA1-209ENST00000529963 A0A1W2PQ27 194 aa6.7□□□□□ -1.34
AMBRA1-209ENST00000529963 A0A1W2PQ45 241 aaPredicted RBP6.7□□□□□ -1.34
AMBRA1-209ENST00000529963 A0A1W2PQ64 194 aa6.7□□□□□ -1.34
AMBRA1-209ENST00000529963 A0A1W2PQC6 194 aa6.7□□□□□ -1.34
AMBRA1-209ENST00000529963 A0A1W2PQD8 194 aa6.7□□□□□ -1.34
AMBRA1-209ENST00000529963 A0A1W2PQY0 241 aa6.7□□□□□ -1.34
AMBRA1-209ENST00000529963 POLRMTO00411 1230 aaKnown RBP6.7□□□□□ -1.34
AMBRA1-209ENST00000529963 FOXN1O15353 648 aa6.7□□□□□ -1.34
AMBRA1-209ENST00000529963 RNMTO43148 476 aaKnown RBP6.7□□□□□ -1.34
AMBRA1-209ENST00000529963 NRDCO43847 1150 aa6.7□□□□□ -1.34
AMBRA1-209ENST00000529963 ASMTLO95671 621 aa6.7□□□□□ -1.34
AMBRA1-209ENST00000529963 C6orf222P0C671 652 aaPredicted RBP6.7□□□□□ -1.34
AMBRA1-209ENST00000529963 SDHBP21912 280 aa6.7□□□□□ -1.34
AMBRA1-209ENST00000529963 SUMO1P63165 101 aaKnown RBP6.7□□□□□ -1.34
AMBRA1-209ENST00000529963 LONRF2Q1L5Z9 754 aa6.7□□□□□ -1.34
AMBRA1-209ENST00000529963 DNAJC10Q8IXB1 793 aa6.7□□□□□ -1.34
AMBRA1-209ENST00000529963 DPF3Q92784 378 aa6.7□□□□□ -1.34
AMBRA1-209ENST00000529963 MMP19Q99542 508 aa6.7□□□□□ -1.34
AMBRA1-209ENST00000529963 PHF20Q9BVI0 1012 aa6.7□□□□□ -1.34
AMBRA1-209ENST00000529963 TMEM260Q9NX78 707 aa6.7□□□□□ -1.34
AMBRA1-209ENST00000529963 RNF181Q9P0P0 153 aa6.7□□□□□ -1.34
AMBRA1-209ENST00000529963 FBLN5Q9UBX5 448 aa6.7□□□□□ -1.34
AMBRA1-209ENST00000529963 PCDHA2Q9Y5H9 948 aa6.7□□□□□ -1.34
AMBRA1-209ENST00000529963 SOS1Q07889 1333 aaPredicted RBP6.69□□□□□ -1.34
AMBRA1-209ENST00000529963 TJP1Q07157 1748 aa6.69□□□□□ -1.34
AMBRA1-209ENST00000529963 WTIPA6NIX2 430 aaPredicted RBP6.69□□□□□ -1.34
AMBRA1-209ENST00000529963 HMOX1P09601 288 aa6.69□□□□□ -1.34
AMBRA1-209ENST00000529963 CYP19A1P11511 503 aaPredicted RBP6.69□□□□□ -1.34
AMBRA1-209ENST00000529963 CDK11BP21127 795 aaKnown RBP6.69□□□□□ -1.34
AMBRA1-209ENST00000529963 TM4SF1P30408 202 aa6.69□□□□□ -1.34
AMBRA1-209ENST00000529963 CHRNA5P30532 468 aa6.69□□□□□ -1.34
AMBRA1-209ENST00000529963 LTBRP36941 435 aa6.69□□□□□ -1.34
AMBRA1-209ENST00000529963 AFMP43652 599 aa6.69□□□□□ -1.34
AMBRA1-209ENST00000529963 MVKQ03426 396 aa6.69□□□□□ -1.34
AMBRA1-209ENST00000529963 SLC39A6Q13433 755 aa6.69□□□□□ -1.34
AMBRA1-209ENST00000529963 SHISA4Q96DD7 197 aa6.69□□□□□ -1.34
AMBRA1-209ENST00000529963 NARFQ9UHQ1 456 aa6.69□□□□□ -1.34
AMBRA1-209ENST00000529963 TMA7Q9Y2S6 64 aaKnown RBP6.69□□□□□ -1.34
AMBRA1-209ENST00000529963 BRCA1P38398 1863 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms