RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 C21orf62-AS1Q17RA5 79 aa6.48□□□□□ -1.37
C11orf88-204ENST00000529661 TM4SF20Q53R12 229 aa6.48□□□□□ -1.37
C11orf88-204ENST00000529661 DDX53Q86TM3 631 aaKnown RBP6.48□□□□□ -1.37
C11orf88-204ENST00000529661 NUDT10Q8NFP7 164 aa6.48□□□□□ -1.37
C11orf88-204ENST00000529661 CXorf38Q8TB03 319 aa6.48□□□□□ -1.37
C11orf88-204ENST00000529661 NUDT11Q96G61 164 aa6.48□□□□□ -1.37
C11orf88-204ENST00000529661 TNPO3Q9Y5L0 923 aaKnown RBP6.48□□□□□ -1.37
C11orf88-204ENST00000529661 COL4A3BPQ9Y5P4 624 aa6.48□□□□□ -1.37
C11orf88-204ENST00000529661 ADAMTS20P59510 1910 aa6.48□□□□□ -1.37
C11orf88-204ENST00000529661 SLC12A8A0AV02 714 aa6.47□□□□□ -1.37
C11orf88-204ENST00000529661 DNAJC8O75937 253 aaPredicted RBP6.47□□□□□ -1.37
C11orf88-204ENST00000529661 KRT37O76014 449 aa6.47□□□□□ -1.37
C11orf88-204ENST00000529661 IL18BPO95998 194 aa6.47□□□□□ -1.37
C11orf88-204ENST00000529661 MMEP08473 750 aa6.47□□□□□ -1.37
C11orf88-204ENST00000529661 COL6A1P12109 1028 aa6.47□□□□□ -1.37
C11orf88-204ENST00000529661 IGFALSP35858 605 aa6.47□□□□□ -1.37
C11orf88-204ENST00000529661 IGBP1P78318 339 aa6.47□□□□□ -1.37
C11orf88-204ENST00000529661 PABPC4Q13310 644 aaKnown RBP eCLIP6.47□□□□□ -1.37
C11orf88-204ENST00000529661 ZNF460Q14592 562 aa6.47□□□□□ -1.37
C11orf88-204ENST00000529661 ZCCHC8Q6NZY4 707 aaKnown RBP6.47□□□□□ -1.37
C11orf88-204ENST00000529661 PKN3Q6P5Z2 889 aa6.47□□□□□ -1.37
C11orf88-204ENST00000529661 KRT26Q7Z3Y9 468 aa6.47□□□□□ -1.37
C11orf88-204ENST00000529661 NOSTRINQ8IVI9 506 aa6.47□□□□□ -1.37
C11orf88-204ENST00000529661 LGI4Q8N135 537 aa6.47□□□□□ -1.37
C11orf88-204ENST00000529661 BARX1Q9HBU1 254 aaPredicted RBP6.47□□□□□ -1.37
C11orf88-204ENST00000529661 KCND1Q9NSA2 647 aa6.47□□□□□ -1.37
C11orf88-204ENST00000529661 SAMD15Q9P1V8 674 aa6.47□□□□□ -1.37
C11orf88-204ENST00000529661 ZDHHC9Q9Y397 364 aa6.47□□□□□ -1.37
C11orf88-204ENST00000529661 hCG_2014768A0A024R1R8 64 aa6.46□□□□□ -1.38
C11orf88-204ENST00000529661 A0A087X0B3 334 aa6.46□□□□□ -1.38
C11orf88-204ENST00000529661 B4E1Z4 1266 aa6.46□□□□□ -1.38
C11orf88-204ENST00000529661 M0R2C6 588 aa6.46□□□□□ -1.38
C11orf88-204ENST00000529661 HIP1RO75146 1068 aa6.46□□□□□ -1.38
C11orf88-204ENST00000529661 GLRX3O76003 335 aaKnown RBP6.46□□□□□ -1.38
C11orf88-204ENST00000529661 NPTXRO95502 500 aa6.46□□□□□ -1.38
C11orf88-204ENST00000529661 KNG1P01042 644 aa6.46□□□□□ -1.38
C11orf88-204ENST00000529661 ASLP04424 464 aa6.46□□□□□ -1.38
C11orf88-204ENST00000529661 PTGS1P23219 599 aa6.46□□□□□ -1.38
C11orf88-204ENST00000529661 AOAHP28039 575 aa6.46□□□□□ -1.38
C11orf88-204ENST00000529661 MC4RP32245 332 aa6.46□□□□□ -1.38
C11orf88-204ENST00000529661 BUD31P41223 144 aaPredicted RBP6.46□□□□□ -1.38
C11orf88-204ENST00000529661 IRF9Q00978 393 aa6.46□□□□□ -1.38
C11orf88-204ENST00000529661 AMPD3Q01432 767 aa6.46□□□□□ -1.38
C11orf88-204ENST00000529661 PLP2Q04941 152 aa6.46□□□□□ -1.38
C11orf88-204ENST00000529661 ZFYVE27Q5T4F4 411 aa6.46□□□□□ -1.38
C11orf88-204ENST00000529661 DHX37Q8IY37 1157 aaKnown RBP6.46□□□□□ -1.38
C11orf88-204ENST00000529661 NIM1KQ8IY84 436 aa6.46□□□□□ -1.38
C11orf88-204ENST00000529661 KCNH7Q9NS40 1196 aa6.46□□□□□ -1.38
C11orf88-204ENST00000529661 INVSQ9Y283 1065 aa6.46□□□□□ -1.38
C11orf88-204ENST00000529661 H0Y858 1186 aa6.45□□□□□ -1.38
C11orf88-204ENST00000529661 B4GALT3O60512 393 aa6.45□□□□□ -1.38
C11orf88-204ENST00000529661 KLHL18O94889 574 aa6.45□□□□□ -1.38
C11orf88-204ENST00000529661 CHGBP05060 677 aa6.45□□□□□ -1.38
C11orf88-204ENST00000529661 CELA3BP08861 270 aa6.45□□□□□ -1.38
C11orf88-204ENST00000529661 SDSP20132 328 aa6.45□□□□□ -1.38
C11orf88-204ENST00000529661 HERVK_113P62684 666 aa6.45□□□□□ -1.38
C11orf88-204ENST00000529661 NFATC3Q12968 1075 aa6.45□□□□□ -1.38
C11orf88-204ENST00000529661 TMEM132BQ14DG7 1078 aa6.45□□□□□ -1.38
C11orf88-204ENST00000529661 KBTBD2Q8IY47 623 aa6.45□□□□□ -1.38
C11orf88-204ENST00000529661 KLHL36Q8N4N3 616 aa6.45□□□□□ -1.38
C11orf88-204ENST00000529661 MBD6Q96DN6 1003 aa6.45□□□□□ -1.38
C11orf88-204ENST00000529661 MFSD3Q96ES6 412 aa6.45□□□□□ -1.38
C11orf88-204ENST00000529661 INCENPQ9NQS7 918 aa6.45□□□□□ -1.38
C11orf88-204ENST00000529661 BTBD7Q9P203 1132 aa6.45□□□□□ -1.38
C11orf88-204ENST00000529661 ZNF536O15090 1300 aa6.45□□□□□ -1.38
C11orf88-204ENST00000529661 FOXP2O15409 715 aa6.44□□□□□ -1.38
C11orf88-204ENST00000529661 JMJD7P0C870 316 aa6.44□□□□□ -1.38
C11orf88-204ENST00000529661 FLT3P36888 993 aa6.44□□□□□ -1.38
C11orf88-204ENST00000529661 ANAPC15P60006 121 aa6.44□□□□□ -1.38
C11orf88-204ENST00000529661 PIK3R6Q5UE93 754 aa6.44□□□□□ -1.38
C11orf88-204ENST00000529661 CHST14Q8NCH0 376 aa6.44□□□□□ -1.38
C11orf88-204ENST00000529661 HIPK4Q8NE63 616 aa6.44□□□□□ -1.38
C11orf88-204ENST00000529661 BOCQ9BWV1 1114 aa6.44□□□□□ -1.38
C11orf88-204ENST00000529661 INTS7Q9NVH2 962 aaKnown RBP6.44□□□□□ -1.38
C11orf88-204ENST00000529661 UCKL1Q9NWZ5 548 aa6.44□□□□□ -1.38
C11orf88-204ENST00000529661 B3GALT1Q9Y5Z6 326 aa6.44□□□□□ -1.38
C11orf88-204ENST00000529661 MYCLP1P12525 358 aaPredicted RBP6.43□□□□□ -1.38
C11orf88-204ENST00000529661 SKOR2Q2VWA4 1001 aaPredicted RBP6.43□□□□□ -1.38
C11orf88-204ENST00000529661 WDR72Q3MJ13 1102 aa6.43□□□□□ -1.38
C11orf88-204ENST00000529661 DPP8Q6V1X1 898 aaPredicted RBP6.43□□□□□ -1.38
C11orf88-204ENST00000529661 Q6ZUG5 572 aa6.43□□□□□ -1.38
C11orf88-204ENST00000529661 UBE2R2Q712K3 238 aaPredicted RBP6.43□□□□□ -1.38
C11orf88-204ENST00000529661 GPR155Q7Z3F1 870 aa6.43□□□□□ -1.38
C11orf88-204ENST00000529661 PLEKHH3Q7Z736 793 aa6.43□□□□□ -1.38
C11orf88-204ENST00000529661 THNSL2Q86YJ6 484 aa6.43□□□□□ -1.38
C11orf88-204ENST00000529661 WDR48Q8TAF3 677 aa6.43□□□□□ -1.38
C11orf88-204ENST00000529661 ASB15Q8WXK1 588 aa6.43□□□□□ -1.38
C11orf88-204ENST00000529661 ERCC4Q92889 916 aaPredicted RBP6.43□□□□□ -1.38
C11orf88-204ENST00000529661 GBP4Q96PP9 640 aa6.43□□□□□ -1.38
C11orf88-204ENST00000529661 CABP5Q9NP86 173 aa6.43□□□□□ -1.38
C11orf88-204ENST00000529661 GALNT8Q9NY28 637 aa6.43□□□□□ -1.38
C11orf88-204ENST00000529661 RASSF10A6NK89 507 aa6.42□□□□□ -1.38
C11orf88-204ENST00000529661 B4GALT4O60513 344 aa6.42□□□□□ -1.38
C11orf88-204ENST00000529661 ADCY8P40145 1251 aa6.42□□□□□ -1.38
C11orf88-204ENST00000529661 STAT3P40763 770 aa6.42□□□□□ -1.38
C11orf88-204ENST00000529661 ARHGAP44Q17R89 818 aa6.42□□□□□ -1.38
C11orf88-204ENST00000529661 CFAP100Q494V2 611 aa6.42□□□□□ -1.38
C11orf88-204ENST00000529661 TBC1D10BQ4KMP7 808 aaPredicted RBP6.42□□□□□ -1.38
C11orf88-204ENST00000529661 RALYLQ86SE5 291 aaKnown RBP6.42□□□□□ -1.38
C11orf88-204ENST00000529661 RPUSD2Q8IZ73 545 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms