RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 TRIM28Q13263 835 aaKnown RBP19.42■□□□□ 0.7
LTBP3-210ENST00000528516 TTBK2Q6IQ55 1244 aa19.42■□□□□ 0.7
LTBP3-210ENST00000528516 RCSD1Q6JBY9 416 aa19.42■□□□□ 0.7
LTBP3-210ENST00000528516 TXNRD3Q86VQ6 643 aa19.42■□□□□ 0.7
LTBP3-210ENST00000528516 ADSSL1Q8N142 457 aa19.42■□□□□ 0.7
LTBP3-210ENST00000528516 PAF1Q8N7H5 531 aa19.42■□□□□ 0.7
LTBP3-210ENST00000528516 GOLPH3Q9H4A6 298 aa19.42■□□□□ 0.7
LTBP3-210ENST00000528516 FBXL5Q9UKA1 691 aa19.42■□□□□ 0.7
LTBP3-210ENST00000528516 UAP1Q16222 522 aaPredicted RBP19.42■□□□□ 0.7
LTBP3-210ENST00000528516 CDC37Q16543 378 aaPredicted RBP19.42■□□□□ 0.7
LTBP3-210ENST00000528516 PFKFB3Q16875 520 aaPredicted RBP19.42■□□□□ 0.7
LTBP3-210ENST00000528516 CCDC105Q8IYK2 499 aa19.42■□□□□ 0.7
LTBP3-210ENST00000528516 PPM1KQ8N3J5 372 aa19.42■□□□□ 0.7
LTBP3-210ENST00000528516 ASIC3Q9UHC3 531 aa19.42■□□□□ 0.7
LTBP3-210ENST00000528516 PTPN22Q9Y2R2 807 aa19.42■□□□□ 0.7
LTBP3-210ENST00000528516 WNT7AO00755 349 aa19.41■□□□□ 0.7
LTBP3-210ENST00000528516 ZNF263O14978 683 aa19.41■□□□□ 0.7
LTBP3-210ENST00000528516 TRAPPC3O43617 180 aa19.41■□□□□ 0.7
LTBP3-210ENST00000528516 DLATP10515 647 aaKnown RBP19.41■□□□□ 0.7
LTBP3-210ENST00000528516 IRF2BP1Q8IU81 584 aa19.41■□□□□ 0.7
LTBP3-210ENST00000528516 ANKRD42Q8N9B4 389 aa19.41■□□□□ 0.7
LTBP3-210ENST00000528516 LRRC53A6NM62 1247 aa19.41■□□□□ 0.7
LTBP3-210ENST00000528516 GFPT2O94808 682 aa19.41■□□□□ 0.7
LTBP3-210ENST00000528516 STAT1P42224 750 aa19.41■□□□□ 0.7
LTBP3-210ENST00000528516 MEA1Q16626 185 aa19.41■□□□□ 0.7
LTBP3-210ENST00000528516 ARMC9Q7Z3E5 817 aa19.41■□□□□ 0.7
LTBP3-210ENST00000528516 CHMP6Q96FZ7 201 aa19.41■□□□□ 0.7
LTBP3-210ENST00000528516 SMIM24O75264 130 aa19.41■□□□□ 0.7
LTBP3-210ENST00000528516 PCK1P35558 622 aa19.41■□□□□ 0.7
LTBP3-210ENST00000528516 SLCO1A2P46721 670 aa19.41■□□□□ 0.7
LTBP3-210ENST00000528516 ITPK1Q13572 414 aa19.41■□□□□ 0.7
LTBP3-210ENST00000528516 ZNF483Q8TF39 744 aaPredicted RBP19.41■□□□□ 0.7
LTBP3-210ENST00000528516 TLR10Q9BXR5 811 aa19.41■□□□□ 0.7
LTBP3-210ENST00000528516 BHMT2Q9H2M3 363 aa19.41■□□□□ 0.7
LTBP3-210ENST00000528516 EHMT1Q9H9B1 1298 aa19.41■□□□□ 0.7
LTBP3-210ENST00000528516 FLOT1O75955 427 aa19.4■□□□□ 0.7
LTBP3-210ENST00000528516 ALAS1P13196 640 aa19.4■□□□□ 0.7
LTBP3-210ENST00000528516 DHX9Q08211 1270 aaKnown RBP19.4■□□□□ 0.7
LTBP3-210ENST00000528516 EXOC3L4Q17RC7 722 aa19.4■□□□□ 0.7
LTBP3-210ENST00000528516 ARHGAP20Q9P2F6 1191 aa19.4■□□□□ 0.7
LTBP3-210ENST00000528516 ATP8A1Q9Y2Q0 1164 aa19.4■□□□□ 0.7
LTBP3-210ENST00000528516 CCT8L1PA6NM43 557 aa19.4■□□□□ 0.7
LTBP3-210ENST00000528516 LACTBP83111 547 aaPredicted RBP19.4■□□□□ 0.7
LTBP3-210ENST00000528516 DNAAF5Q86Y56 855 aa19.4■□□□□ 0.7
LTBP3-210ENST00000528516 FAM178BQ8IXR5 827 aa19.4■□□□□ 0.7
LTBP3-210ENST00000528516 MTMR8Q96EF0 704 aa19.4■□□□□ 0.7
LTBP3-210ENST00000528516 ZBTB12Q9Y330 459 aaPredicted RBP19.4■□□□□ 0.7
LTBP3-210ENST00000528516 TESPA1A2RU30 521 aaPredicted RBP19.4■□□□□ 0.7
LTBP3-210ENST00000528516 FKBP3Q00688 224 aaKnown RBP19.4■□□□□ 0.7
LTBP3-210ENST00000528516 CALCOCO2Q13137 446 aa19.4■□□□□ 0.7
LTBP3-210ENST00000528516 ANKRD40Q6AI12 368 aa19.4■□□□□ 0.7
LTBP3-210ENST00000528516 C15orf41Q9Y2V0 281 aa19.4■□□□□ 0.7
LTBP3-210ENST00000528516 UPP2O95045 317 aa19.39■□□□□ 0.7
LTBP3-210ENST00000528516 THEMIS2Q5TEJ8 643 aa19.39■□□□□ 0.7
LTBP3-210ENST00000528516 POTEB3A0JP26 581 aa19.39■□□□□ 0.69
LTBP3-210ENST00000528516 POTECB2RU33 542 aa19.39■□□□□ 0.69
LTBP3-210ENST00000528516 USP17L10C9JJH3 530 aa19.39■□□□□ 0.69
LTBP3-210ENST00000528516 MMEP08473 750 aa19.39■□□□□ 0.69
LTBP3-210ENST00000528516 TRAPPC10P48553 1259 aa19.39■□□□□ 0.69
LTBP3-210ENST00000528516 ITIH3Q06033 890 aa19.39■□□□□ 0.69
LTBP3-210ENST00000528516 ODR4Q5SWX8 454 aa19.39■□□□□ 0.69
LTBP3-210ENST00000528516 POTEBQ6S5H4 581 aa19.39■□□□□ 0.69
LTBP3-210ENST00000528516 C6orf89Q6UWU4 347 aa19.39■□□□□ 0.69
LTBP3-210ENST00000528516 NSUN4Q96CB9 384 aaKnown RBP19.39■□□□□ 0.69
LTBP3-210ENST00000528516 NSRP1Q9H0G5 558 aaKnown RBP19.39■□□□□ 0.69
LTBP3-210ENST00000528516 GGA2Q9UJY4 613 aa19.39■□□□□ 0.69
LTBP3-210ENST00000528516 CTTNQ14247 550 aaKnown RBP19.39■□□□□ 0.69
LTBP3-210ENST00000528516 TAF11Q15544 211 aa19.39■□□□□ 0.69
LTBP3-210ENST00000528516 BZW1Q7L1Q6 419 aaKnown RBP19.39■□□□□ 0.69
LTBP3-210ENST00000528516 CCDC26Q8TAB7 109 aa19.39■□□□□ 0.69
LTBP3-210ENST00000528516 KLHL29Q96CT2 875 aa19.39■□□□□ 0.69
LTBP3-210ENST00000528516 LZTS2Q9BRK4 669 aa19.39■□□□□ 0.69
LTBP3-210ENST00000528516 CDCA7Q9BWT1 371 aaPredicted RBP19.39■□□□□ 0.69
LTBP3-210ENST00000528516 NPHP3-ACAD11A0A0J9YXS1 232 aa19.38■□□□□ 0.69
LTBP3-210ENST00000528516 EVI5O60447 810 aa19.38■□□□□ 0.69
LTBP3-210ENST00000528516 MTMR3Q13615 1198 aa19.38■□□□□ 0.69
LTBP3-210ENST00000528516 FBXO11Q86XK2 927 aa19.38■□□□□ 0.69
LTBP3-210ENST00000528516 LARGE2Q8N3Y3 721 aa19.38■□□□□ 0.69
LTBP3-210ENST00000528516 GDF3Q9NR23 364 aa19.38■□□□□ 0.69
LTBP3-210ENST00000528516 H2AFZP0C0S5 128 aa19.38■□□□□ 0.69
LTBP3-210ENST00000528516 PRLRP16471 622 aa19.38■□□□□ 0.69
LTBP3-210ENST00000528516 CASP7P55210 303 aa19.38■□□□□ 0.69
LTBP3-210ENST00000528516 ATP11AP98196 1134 aa19.38■□□□□ 0.69
LTBP3-210ENST00000528516 MESDQ14696 234 aa19.38■□□□□ 0.69
LTBP3-210ENST00000528516 H2AFVQ71UI9 128 aa19.38■□□□□ 0.69
LTBP3-210ENST00000528516 KIF2BQ8N4N8 673 aa19.38■□□□□ 0.69
LTBP3-210ENST00000528516 PSMD1Q99460 953 aa19.38■□□□□ 0.69
LTBP3-210ENST00000528516 DDX47Q9H0S4 455 aaKnown RBP19.38■□□□□ 0.69
LTBP3-210ENST00000528516 EMILIN3Q9NT22 766 aa19.38■□□□□ 0.69
LTBP3-210ENST00000528516 UTP11Q9Y3A2 253 aaKnown RBP19.38■□□□□ 0.69
LTBP3-210ENST00000528516 IFNB1P01574 187 aa19.38■□□□□ 0.69
LTBP3-210ENST00000528516 MXRA7P84157 204 aa19.38■□□□□ 0.69
LTBP3-210ENST00000528516 ZNF507Q8TCN5 953 aa19.38■□□□□ 0.69
LTBP3-210ENST00000528516 ARHGEF1Q92888 912 aaKnown RBP19.38■□□□□ 0.69
LTBP3-210ENST00000528516 DHTKD1Q96HY7 919 aaPredicted RBP19.38■□□□□ 0.69
LTBP3-210ENST00000528516 RNF14Q9UBS8 474 aa19.38■□□□□ 0.69
LTBP3-210ENST00000528516 SLC4A9Q96Q91 983 aa19.37■□□□□ 0.69
LTBP3-210ENST00000528516 PNMA2Q9UL42 364 aa19.37■□□□□ 0.69
LTBP3-210ENST00000528516 PPIP5K2O43314 1243 aa19.37■□□□□ 0.69
LTBP3-210ENST00000528516 XRCC4Q13426 336 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms