RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	LIMCH1	Q9UPQ0	1083 aa		13.31	□□□□□ -0.28
PSMC3-205	ENST00000528362	PCDHA10	Q9Y5I2	948 aa		13.31	□□□□□ -0.28
PSMC3-205	ENST00000528362	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.31	□□□□□ -0.28
PSMC3-205	ENST00000528362	PRUNE2	Q8WUY3	3088 aa		13.31	□□□□□ -0.28
PSMC3-205	ENST00000528362	UNC80	Q8N2C7	3258 aa		13.31	□□□□□ -0.28
PSMC3-205	ENST00000528362	DOCK5	Q9H7D0	1870 aa		13.3	□□□□□ -0.28
PSMC3-205	ENST00000528362	CCDC194	A0A1B0GVG4	234 aa		13.3	□□□□□ -0.28
PSMC3-205	ENST00000528362	WDR64	B1ANS9	1081 aa		13.3	□□□□□ -0.28
PSMC3-205	ENST00000528362	ZBTB42	B2RXF5	422 aa		13.3	□□□□□ -0.28
PSMC3-205	ENST00000528362	SLC37A4	O43826	429 aa		13.3	□□□□□ -0.28
PSMC3-205	ENST00000528362	HBP1	O60381	514 aa		13.3	□□□□□ -0.28
PSMC3-205	ENST00000528362	EFCAB14	O75071	495 aa		13.3	□□□□□ -0.28
PSMC3-205	ENST00000528362	PSMD10	O75832	226 aa		13.3	□□□□□ -0.28
PSMC3-205	ENST00000528362	CA3	P07451	260 aa		13.3	□□□□□ -0.28
PSMC3-205	ENST00000528362	PSAP	P07602	524 aa		13.3	□□□□□ -0.28
PSMC3-205	ENST00000528362	RBM25	P49756	843 aa	Known RBP	13.3	□□□□□ -0.28
PSMC3-205	ENST00000528362	NR5A1	Q13285	461 aa		13.3	□□□□□ -0.28
PSMC3-205	ENST00000528362	LRCH2	Q5VUJ6	765 aa		13.3	□□□□□ -0.28
PSMC3-205	ENST00000528362	PPP2R2D	Q66LE6	453 aa		13.3	□□□□□ -0.28
PSMC3-205	ENST00000528362	MTHFD1L	Q6UB35	978 aa		13.3	□□□□□ -0.28
PSMC3-205	ENST00000528362	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
PSMC3-205	ENST00000528362	PIK3AP1	Q6ZUJ8	805 aa		13.3	□□□□□ -0.28
PSMC3-205	ENST00000528362	RSPH3	Q86UC2	560 aa		13.3	□□□□□ -0.28
PSMC3-205	ENST00000528362	TNPO1	Q92973	898 aa	Known RBP	13.3	□□□□□ -0.28
PSMC3-205	ENST00000528362	TNFRSF25	Q93038	417 aa		13.3	□□□□□ -0.28
PSMC3-205	ENST00000528362	TEKT3	Q9BXF9	490 aa		13.3	□□□□□ -0.28
PSMC3-205	ENST00000528362	FAM49A	Q9H0Q0	323 aa	Predicted RBP	13.3	□□□□□ -0.28
PSMC3-205	ENST00000528362	PRDM12	Q9H4Q4	367 aa		13.3	□□□□□ -0.28
PSMC3-205	ENST00000528362	PCDHA2	Q9Y5H9	948 aa		13.3	□□□□□ -0.28
PSMC3-205	ENST00000528362	MYH7B	A7E2Y1	1941 aa		13.3	□□□□□ -0.28
PSMC3-205	ENST00000528362	IGSF9B	Q9UPX0	1349 aa		13.3	□□□□□ -0.28
PSMC3-205	ENST00000528362	SCN5A	Q14524	2016 aa		13.29	□□□□□ -0.28
PSMC3-205	ENST00000528362	FAM205C	A6NFA0	338 aa		13.29	□□□□□ -0.28
PSMC3-205	ENST00000528362	CHMP2A	O43633	222 aa		13.29	□□□□□ -0.28
PSMC3-205	ENST00000528362	ZNF862	O60290	1169 aa		13.29	□□□□□ -0.28
PSMC3-205	ENST00000528362	GHR	P10912	638 aa		13.29	□□□□□ -0.28
PSMC3-205	ENST00000528362	FOSL2	P15408	326 aa		13.29	□□□□□ -0.28
PSMC3-205	ENST00000528362	MRPS6	P82932	125 aa	Known RBP	13.29	□□□□□ -0.28
PSMC3-205	ENST00000528362	LPIN1	Q14693	890 aa		13.29	□□□□□ -0.28
PSMC3-205	ENST00000528362	UGCG	Q16739	394 aa		13.29	□□□□□ -0.28
PSMC3-205	ENST00000528362	LETM2	Q2VYF4	491 aa		13.29	□□□□□ -0.28
PSMC3-205	ENST00000528362	B3GNT9	Q6UX72	402 aa		13.29	□□□□□ -0.28
PSMC3-205	ENST00000528362	NEK8	Q86SG6	692 aa		13.29	□□□□□ -0.28
PSMC3-205	ENST00000528362	CCDC83	Q8IWF9	413 aa		13.29	□□□□□ -0.28
PSMC3-205	ENST00000528362	MAFA	Q8NHW3	353 aa	Predicted RBP	13.29	□□□□□ -0.28
PSMC3-205	ENST00000528362	SEPT8	Q92599	483 aa		13.29	□□□□□ -0.28
PSMC3-205	ENST00000528362	IFIH1	Q9BYX4	1025 aa	Known RBP	13.29	□□□□□ -0.28
PSMC3-205	ENST00000528362	DISC1	Q9NRI5	854 aa		13.29	□□□□□ -0.28
PSMC3-205	ENST00000528362	GABBR1	Q9UBS5	961 aa		13.29	□□□□□ -0.28
PSMC3-205	ENST00000528362	DDX25	Q9UHL0	483 aa	Known RBP	13.29	□□□□□ -0.28
PSMC3-205	ENST00000528362	SAMM50	Q9Y512	469 aa		13.29	□□□□□ -0.28
PSMC3-205	ENST00000528362	CDY2A	Q9Y6F7	541 aa		13.29	□□□□□ -0.28
PSMC3-205	ENST00000528362	TET1	Q8NFU7	2136 aa		13.28	□□□□□ -0.28
PSMC3-205	ENST00000528362	LCHN	A4D1U4	455 aa		13.28	□□□□□ -0.28
PSMC3-205	ENST00000528362	TLL1	O43897	1013 aa		13.28	□□□□□ -0.28
PSMC3-205	ENST00000528362	GJB5	O95377	273 aa		13.28	□□□□□ -0.28
PSMC3-205	ENST00000528362	C22orf31	O95567	290 aa		13.28	□□□□□ -0.28
PSMC3-205	ENST00000528362	GCFC2	P16383	781 aa	Known RBP	13.28	□□□□□ -0.28
PSMC3-205	ENST00000528362	KLRC1	P26715	233 aa		13.28	□□□□□ -0.28
PSMC3-205	ENST00000528362	SFN	P31947	248 aa		13.28	□□□□□ -0.28
PSMC3-205	ENST00000528362	KRT2	P35908	639 aa		13.28	□□□□□ -0.28
PSMC3-205	ENST00000528362	JAK3	P52333	1124 aa		13.28	□□□□□ -0.28
PSMC3-205	ENST00000528362	FOSB	P53539	338 aa		13.28	□□□□□ -0.28
PSMC3-205	ENST00000528362	ADGRE1	Q14246	886 aa		13.28	□□□□□ -0.28
PSMC3-205	ENST00000528362	ZNF484	Q5JVG2	852 aa		13.28	□□□□□ -0.28
PSMC3-205	ENST00000528362	FBXO47	Q5MNV8	452 aa		13.28	□□□□□ -0.28
PSMC3-205	ENST00000528362	PPP4R3A	Q6IN85	833 aa		13.28	□□□□□ -0.28
PSMC3-205	ENST00000528362	CKAP2L	Q8IYA6	745 aa		13.28	□□□□□ -0.28
PSMC3-205	ENST00000528362	BBX	Q8WY36	941 aa	Predicted RBP	13.28	□□□□□ -0.28
PSMC3-205	ENST00000528362	KCNMB3	Q9NPA1	279 aa		13.28	□□□□□ -0.28
PSMC3-205	ENST00000528362	COL1A2	P08123	1366 aa		13.28	□□□□□ -0.28
PSMC3-205	ENST00000528362	SMIM35	A0A1B0GVV1	85 aa		13.27	□□□□□ -0.29
PSMC3-205	ENST00000528362	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	13.27	□□□□□ -0.29
PSMC3-205	ENST00000528362	KIF28P	B7ZC32	967 aa		13.27	□□□□□ -0.29
PSMC3-205	ENST00000528362	MMP1	P03956	469 aa		13.27	□□□□□ -0.29
PSMC3-205	ENST00000528362	AMH	P03971	560 aa		13.27	□□□□□ -0.29
PSMC3-205	ENST00000528362	OAT	P04181	439 aa		13.27	□□□□□ -0.29
PSMC3-205	ENST00000528362	RPLP2	P05387	115 aa	Known RBP	13.27	□□□□□ -0.29
PSMC3-205	ENST00000528362	PRKCE	Q02156	737 aa		13.27	□□□□□ -0.29
PSMC3-205	ENST00000528362	TAP1	Q03518	808 aa		13.27	□□□□□ -0.29
PSMC3-205	ENST00000528362	TMEM62	Q0P6H9	643 aa		13.27	□□□□□ -0.29
PSMC3-205	ENST00000528362	KRT40	Q6A162	431 aa		13.27	□□□□□ -0.29
PSMC3-205	ENST00000528362	FAM117B	Q6P1L5	589 aa		13.27	□□□□□ -0.29
PSMC3-205	ENST00000528362	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.27	□□□□□ -0.29
PSMC3-205	ENST00000528362	SPRED2	Q7Z698	418 aa		13.27	□□□□□ -0.29
PSMC3-205	ENST00000528362	KIAA0319L	Q8IZA0	1049 aa		13.27	□□□□□ -0.29
PSMC3-205	ENST00000528362	MYOCD	Q8IZQ8	938 aa		13.27	□□□□□ -0.29
PSMC3-205	ENST00000528362	RDM1	Q8NG50	284 aa		13.27	□□□□□ -0.29
PSMC3-205	ENST00000528362	APBB2	Q92870	758 aa		13.27	□□□□□ -0.29
PSMC3-205	ENST00000528362	BRMS1	Q9HCU9	246 aa		13.27	□□□□□ -0.29
PSMC3-205	ENST00000528362	VAV3	Q9UKW4	847 aa		13.27	□□□□□ -0.29
PSMC3-205	ENST00000528362	TRPV2	Q9Y5S1	764 aa		13.27	□□□□□ -0.29
PSMC3-205	ENST00000528362	EPOP	A6NHQ4	379 aa		13.26	□□□□□ -0.29
PSMC3-205	ENST00000528362	BTBD18	B2RXH4	712 aa		13.26	□□□□□ -0.29
PSMC3-205	ENST00000528362	CCNT1	O60563	726 aa	Known RBP	13.26	□□□□□ -0.29
PSMC3-205	ENST00000528362	IER5	Q5VY09	327 aa		13.26	□□□□□ -0.29
PSMC3-205	ENST00000528362	TSHZ1	Q6ZSZ6	1077 aa		13.26	□□□□□ -0.29
PSMC3-205	ENST00000528362	MIER3	Q7Z3K6	550 aa		13.26	□□□□□ -0.29
PSMC3-205	ENST00000528362	DIS3L2	Q8IYB7	885 aa	Known RBP	13.26	□□□□□ -0.29
PSMC3-205	ENST00000528362	HAS1	Q92839	578 aa		13.26	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms