RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 CEP131Q9UPN4 1083 aa10.88□□□□□ -0.67
CHD7-208ENST00000528280 YBX2Q9Y2T7 364 aaKnown RBP10.88□□□□□ -0.67
CHD7-208ENST00000528280 CYP3A7-CYP3A51PA0A087WV96 503 aa10.87□□□□□ -0.67
CHD7-208ENST00000528280 SMIM35A0A1B0GVV1 85 aa10.87□□□□□ -0.67
CHD7-208ENST00000528280 GTPBP6O43824 516 aaPredicted RBP10.87□□□□□ -0.67
CHD7-208ENST00000528280 GJB5O95377 273 aa10.87□□□□□ -0.67
CHD7-208ENST00000528280 CA3P07451 260 aa10.87□□□□□ -0.67
CHD7-208ENST00000528280 POU3F3P20264 500 aaPredicted RBP10.87□□□□□ -0.67
CHD7-208ENST00000528280 CYP3A7P24462 503 aa10.87□□□□□ -0.67
CHD7-208ENST00000528280 SFNP31947 248 aa10.87□□□□□ -0.67
CHD7-208ENST00000528280 MBTPS1Q14703 1052 aa10.87□□□□□ -0.67
CHD7-208ENST00000528280 PLCB4Q15147 1175 aa10.87□□□□□ -0.67
CHD7-208ENST00000528280 Q4G0T1 1027 aa10.87□□□□□ -0.67
CHD7-208ENST00000528280 MARCH8Q5T0T0 291 aa10.87□□□□□ -0.67
CHD7-208ENST00000528280 SWSAP1Q6NVH7 229 aa10.87□□□□□ -0.67
CHD7-208ENST00000528280 PDXDC2PQ6P474 469 aa10.87□□□□□ -0.67
CHD7-208ENST00000528280 KRT25Q7Z3Z0 450 aa10.87□□□□□ -0.67
CHD7-208ENST00000528280 CKAP2LQ8IYA6 745 aa10.87□□□□□ -0.67
CHD7-208ENST00000528280 RDM1Q8NG50 284 aa10.87□□□□□ -0.67
CHD7-208ENST00000528280 ATP8B4Q8TF62 1192 aa10.87□□□□□ -0.67
CHD7-208ENST00000528280 BBXQ8WY36 941 aaPredicted RBP10.87□□□□□ -0.67
CHD7-208ENST00000528280 FAM167AQ96KS9 214 aa10.87□□□□□ -0.67
CHD7-208ENST00000528280 PCYT2Q99447 389 aa10.87□□□□□ -0.67
CHD7-208ENST00000528280 IFIH1Q9BYX4 1025 aaKnown RBP10.87□□□□□ -0.67
CHD7-208ENST00000528280 PRDM12Q9H4Q4 367 aa10.87□□□□□ -0.67
CHD7-208ENST00000528280 TELO2Q9Y4R8 837 aa10.87□□□□□ -0.67
CHD7-208ENST00000528280 SAMM50Q9Y512 469 aa10.87□□□□□ -0.67
CHD7-208ENST00000528280 MAFBQ9Y5Q3 323 aaPredicted RBP10.87□□□□□ -0.67
CHD7-208ENST00000528280 COL1A2P08123 1366 aa10.87□□□□□ -0.67
CHD7-208ENST00000528280 STK36Q9NRP7 1315 aa10.86□□□□□ -0.67
CHD7-208ENST00000528280 SCN5AQ14524 2016 aa10.86□□□□□ -0.67
CHD7-208ENST00000528280 WDR64B1ANS9 1081 aa10.86□□□□□ -0.67
CHD7-208ENST00000528280 DDX39AO00148 427 aaKnown RBP10.86□□□□□ -0.67
CHD7-208ENST00000528280 MAGEB2O15479 319 aa10.86□□□□□ -0.67
CHD7-208ENST00000528280 GPR37L1O60883 481 aa10.86□□□□□ -0.67
CHD7-208ENST00000528280 CHRNA1P02708 482 aa10.86□□□□□ -0.67
CHD7-208ENST00000528280 MYOGP15173 224 aa10.86□□□□□ -0.67
CHD7-208ENST00000528280 IGFBP4P22692 258 aa10.86□□□□□ -0.67
CHD7-208ENST00000528280 KLRC1P26715 233 aa10.86□□□□□ -0.67
CHD7-208ENST00000528280 NEK4P51957 841 aa10.86□□□□□ -0.67
CHD7-208ENST00000528280 AK2P54819 239 aa10.86□□□□□ -0.67
CHD7-208ENST00000528280 IGBP1P78318 339 aa10.86□□□□□ -0.67
CHD7-208ENST00000528280 SCRN1Q12765 414 aa10.86□□□□□ -0.67
CHD7-208ENST00000528280 NONOQ15233 471 aaKnown RBP eCLIP10.86□□□□□ -0.67
CHD7-208ENST00000528280 CCDC85BQ15834 202 aaPredicted RBP10.86□□□□□ -0.67
CHD7-208ENST00000528280 TBCKQ8TEA7 893 aa10.86□□□□□ -0.67
CHD7-208ENST00000528280 DNAJB3Q8WWF6 145 aa10.86□□□□□ -0.67
CHD7-208ENST00000528280 TOP1MTQ969P6 601 aa10.86□□□□□ -0.67
CHD7-208ENST00000528280 SAMD11Q96NU1 681 aa10.86□□□□□ -0.67
CHD7-208ENST00000528280 LARP6Q9BRS8 491 aaKnown RBP10.86□□□□□ -0.67
CHD7-208ENST00000528280 TEKT3Q9BXF9 490 aa10.86□□□□□ -0.67
CHD7-208ENST00000528280 FTHL17Q9BXU8 183 aa10.86□□□□□ -0.67
CHD7-208ENST00000528280 BRMS1Q9HCU9 246 aa10.86□□□□□ -0.67
CHD7-208ENST00000528280 LMCD1Q9NZU5 365 aa10.86□□□□□ -0.67
CHD7-208ENST00000528280 TPCN1Q9ULQ1 816 aa10.86□□□□□ -0.67
CHD7-208ENST00000528280 XIRP2A4UGR9 3374 aa10.86□□□□□ -0.67
CHD7-208ENST00000528280 CCDC194A0A1B0GVG4 234 aa10.85□□□□□ -0.67
CHD7-208ENST00000528280 DKC1O60832 514 aaKnown RBP eCLIP10.85□□□□□ -0.67
CHD7-208ENST00000528280 GAS7O60861 476 aa10.85□□□□□ -0.67
CHD7-208ENST00000528280 PPFIA3O75145 1194 aa10.85□□□□□ -0.67
CHD7-208ENST00000528280 CCNE2O96020 404 aa10.85□□□□□ -0.67
CHD7-208ENST00000528280 CTSHP09668 335 aa10.85□□□□□ -0.67
CHD7-208ENST00000528280 GCFC2P16383 781 aaKnown RBP10.85□□□□□ -0.67
CHD7-208ENST00000528280 TMOD1P28289 359 aa10.85□□□□□ -0.67
CHD7-208ENST00000528280 MRE11P49959 708 aa10.85□□□□□ -0.67
CHD7-208ENST00000528280 JAK3P52333 1124 aa10.85□□□□□ -0.67
CHD7-208ENST00000528280 MRPS6P82932 125 aaKnown RBP10.85□□□□□ -0.67
CHD7-208ENST00000528280 CDC42EP1Q00587 391 aa10.85□□□□□ -0.67
CHD7-208ENST00000528280 TAP1Q03518 808 aa10.85□□□□□ -0.67
CHD7-208ENST00000528280 ADGRE1Q14246 886 aa10.85□□□□□ -0.67
CHD7-208ENST00000528280 MTHFD1LQ6UB35 978 aa10.85□□□□□ -0.67
CHD7-208ENST00000528280 TSHZ1Q6ZSZ6 1077 aa10.85□□□□□ -0.67
CHD7-208ENST00000528280 RASGRP4Q8TDF6 673 aa10.85□□□□□ -0.67
CHD7-208ENST00000528280 SLC5A5Q92911 643 aa10.85□□□□□ -0.67
CHD7-208ENST00000528280 FAM20AQ96MK3 541 aa10.85□□□□□ -0.67
CHD7-208ENST00000528280 TGS1Q96RS0 853 aaKnown RBP10.85□□□□□ -0.67
CHD7-208ENST00000528280 PHF20Q9BVI0 1012 aa10.85□□□□□ -0.67
CHD7-208ENST00000528280 CELF4Q9BZC1 486 aaKnown RBP10.85□□□□□ -0.67
CHD7-208ENST00000528280 DISC1Q9NRI5 854 aa10.85□□□□□ -0.67
CHD7-208ENST00000528280 ORC3Q9UBD5 711 aaPredicted RBP10.85□□□□□ -0.67
CHD7-208ENST00000528280 TANC1Q9C0D5 1861 aa10.85□□□□□ -0.67
CHD7-208ENST00000528280 KDM3AQ9Y4C1 1321 aa10.84□□□□□ -0.67
CHD7-208ENST00000528280 M0R2N6 131 aa10.84□□□□□ -0.67
CHD7-208ENST00000528280 MSH4O15457 936 aa10.84□□□□□ -0.67
CHD7-208ENST00000528280 MARCH6O60337 910 aa10.84□□□□□ -0.67
CHD7-208ENST00000528280 DEFB103AP81534 67 aa10.84□□□□□ -0.67
CHD7-208ENST00000528280 HTRA4P83105 476 aaPredicted RBP10.84□□□□□ -0.67
CHD7-208ENST00000528280 MGAT3Q09327 533 aa10.84□□□□□ -0.67
CHD7-208ENST00000528280 TRIM29Q14134 588 aa10.84□□□□□ -0.67
CHD7-208ENST00000528280 FBXO47Q5MNV8 452 aa10.84□□□□□ -0.67
CHD7-208ENST00000528280 LRCH2Q5VUJ6 765 aa10.84□□□□□ -0.67
CHD7-208ENST00000528280 PPP4R3AQ6IN85 833 aa10.84□□□□□ -0.67
CHD7-208ENST00000528280 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.84□□□□□ -0.67
CHD7-208ENST00000528280 RUFY4Q6ZNE9 571 aa10.84□□□□□ -0.67
CHD7-208ENST00000528280 MYOCDQ8IZQ8 938 aa10.84□□□□□ -0.67
CHD7-208ENST00000528280 C11orf16Q9NQ32 467 aa10.84□□□□□ -0.67
CHD7-208ENST00000528280 GABBR1Q9UBS5 961 aa10.84□□□□□ -0.67
CHD7-208ENST00000528280 LIMCH1Q9UPQ0 1083 aa10.84□□□□□ -0.67
CHD7-208ENST00000528280 TRPV2Q9Y5S1 764 aa10.84□□□□□ -0.67
CHD7-208ENST00000528280 CDY2AQ9Y6F7 541 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms