RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 MBLAC1A4D2B0 266 aaPredicted RBP17.58■□□□□ 0.4
CAPN1-213ENST00000527897 EDIL3O43854 480 aa17.58■□□□□ 0.4
CAPN1-213ENST00000527897 GAS7O60861 476 aa17.58■□□□□ 0.4
CAPN1-213ENST00000527897 CHRNA1P02708 482 aa17.58■□□□□ 0.4
CAPN1-213ENST00000527897 PSAPP07602 524 aa17.58■□□□□ 0.4
CAPN1-213ENST00000527897 SLC26A2P50443 739 aa17.58■□□□□ 0.4
CAPN1-213ENST00000527897 NPY5RQ15761 445 aa17.58■□□□□ 0.4
CAPN1-213ENST00000527897 LRCH2Q5VUJ6 765 aa17.58■□□□□ 0.4
CAPN1-213ENST00000527897 KRT25Q7Z3Z0 450 aa17.58■□□□□ 0.4
CAPN1-213ENST00000527897 WASF1Q92558 559 aa17.58■□□□□ 0.4
CAPN1-213ENST00000527897 GTF3C6Q969F1 213 aa17.58■□□□□ 0.4
CAPN1-213ENST00000527897 PHF20Q9BVI0 1012 aa17.58■□□□□ 0.4
CAPN1-213ENST00000527897 IFIH1Q9BYX4 1025 aaKnown RBP17.58■□□□□ 0.4
CAPN1-213ENST00000527897 GABBR1Q9UBS5 961 aa17.58■□□□□ 0.4
CAPN1-213ENST00000527897 CDY2AQ9Y6F7 541 aa17.58■□□□□ 0.4
CAPN1-213ENST00000527897 SIP14410 1827 aa17.57■□□□□ 0.4
CAPN1-213ENST00000527897 IGKV6D-21A0A0A0MT36 114 aa17.57■□□□□ 0.4
CAPN1-213ENST00000527897 M0QZ92 97 aa17.57■□□□□ 0.4
CAPN1-213ENST00000527897 M0R2N6 131 aa17.57■□□□□ 0.4
CAPN1-213ENST00000527897 HBP1O60381 514 aa17.57■□□□□ 0.4
CAPN1-213ENST00000527897 AMHP03971 560 aa17.57■□□□□ 0.4
CAPN1-213ENST00000527897 LETM2Q2VYF4 491 aa17.57■□□□□ 0.4
CAPN1-213ENST00000527897 C8orf34Q49A92 452 aa17.57■□□□□ 0.4
CAPN1-213ENST00000527897 FAM26DQ5JW98 314 aa17.57■□□□□ 0.4
CAPN1-213ENST00000527897 SMAP1Q8IYB5 467 aaPredicted RBP17.57■□□□□ 0.4
CAPN1-213ENST00000527897 FAM177A1Q8N128 213 aaPredicted RBP17.57■□□□□ 0.4
CAPN1-213ENST00000527897 ATP8B4Q8TF62 1192 aa17.57■□□□□ 0.4
CAPN1-213ENST00000527897 IL17RAQ96F46 866 aa17.57■□□□□ 0.4
CAPN1-213ENST00000527897 TEKT3Q9BXF9 490 aa17.57■□□□□ 0.4
CAPN1-213ENST00000527897 PCDHA10Q9Y5I2 948 aa17.57■□□□□ 0.4
CAPN1-213ENST00000527897 EVPLQ92817 2033 aa17.56■□□□□ 0.4
CAPN1-213ENST00000527897 LCHNA4D1U4 455 aa17.56■□□□□ 0.4
CAPN1-213ENST00000527897 WDR64B1ANS9 1081 aa17.56■□□□□ 0.4
CAPN1-213ENST00000527897 RFXAPO00287 272 aa17.56■□□□□ 0.4
CAPN1-213ENST00000527897 JAK2O60674 1132 aa17.56■□□□□ 0.4
CAPN1-213ENST00000527897 ARHGEF15O94989 841 aa17.56■□□□□ 0.4
CAPN1-213ENST00000527897 UPP2O95045 317 aa17.56■□□□□ 0.4
CAPN1-213ENST00000527897 KLRC1P26715 233 aa17.56■□□□□ 0.4
CAPN1-213ENST00000527897 MRPS6P82932 125 aaKnown RBP17.56■□□□□ 0.4
CAPN1-213ENST00000527897 MTHFD1LQ6UB35 978 aa17.56■□□□□ 0.4
CAPN1-213ENST00000527897 PIK3AP1Q6ZUJ8 805 aa17.56■□□□□ 0.4
CAPN1-213ENST00000527897 MICALL1Q8N3F8 863 aa17.56■□□□□ 0.4
CAPN1-213ENST00000527897 OXER1Q8TDS5 423 aa17.56■□□□□ 0.4
CAPN1-213ENST00000527897 ARNTL2Q8WYA1 636 aa17.56■□□□□ 0.4
CAPN1-213ENST00000527897 DISC1Q9NRI5 854 aa17.56■□□□□ 0.4
CAPN1-213ENST00000527897 GINS2Q9Y248 185 aa17.56■□□□□ 0.4
CAPN1-213ENST00000527897 PCDHA2Q9Y5H9 948 aa17.56■□□□□ 0.4
CAPN1-213ENST00000527897 WDR81Q562E7 1941 aa17.55■□□□□ 0.4
CAPN1-213ENST00000527897 LOXHD1Q8IVV2 1947 aa17.55■□□□□ 0.4
CAPN1-213ENST00000527897 GJB5O95377 273 aa17.55■□□□□ 0.4
CAPN1-213ENST00000527897 ATP4AP20648 1035 aa17.55■□□□□ 0.4
CAPN1-213ENST00000527897 TAP1Q03518 808 aa17.55■□□□□ 0.4
CAPN1-213ENST00000527897 MGAT3Q09327 533 aa17.55■□□□□ 0.4
CAPN1-213ENST00000527897 ADGRE1Q14246 886 aa17.55■□□□□ 0.4
CAPN1-213ENST00000527897 LPIN1Q14693 890 aa17.55■□□□□ 0.4
CAPN1-213ENST00000527897 CCDC85BQ15834 202 aaPredicted RBP17.55■□□□□ 0.4
CAPN1-213ENST00000527897 Q4G0T1 1027 aa17.55■□□□□ 0.4
CAPN1-213ENST00000527897 IER5Q5VY09 327 aa17.55■□□□□ 0.4
CAPN1-213ENST00000527897 RPAINQ86UA6 219 aa17.55■□□□□ 0.4
CAPN1-213ENST00000527897 NSUN7Q8NE18 718 aaKnown RBP17.55■□□□□ 0.4
CAPN1-213ENST00000527897 APBB2Q92870 758 aa17.55■□□□□ 0.4
CAPN1-213ENST00000527897 SLC5A5Q92911 643 aa17.55■□□□□ 0.4
CAPN1-213ENST00000527897 PPP1R16BQ96T49 567 aa17.55■□□□□ 0.4
CAPN1-213ENST00000527897 RIT2Q99578 217 aa17.55■□□□□ 0.4
CAPN1-213ENST00000527897 RAD9AQ99638 391 aa17.55■□□□□ 0.4
CAPN1-213ENST00000527897 UNC45AQ9H3U1 944 aa17.55■□□□□ 0.4
CAPN1-213ENST00000527897 DDX25Q9UHL0 483 aaKnown RBP17.55■□□□□ 0.4
CAPN1-213ENST00000527897 MTUS1Q9ULD2 1270 aa17.55■□□□□ 0.4
CAPN1-213ENST00000527897 FDPSP14324 419 aaKnown RBP17.54■□□□□ 0.4
CAPN1-213ENST00000527897 TRIM29Q14134 588 aa17.54■□□□□ 0.4
CAPN1-213ENST00000527897 ZNF484Q5JVG2 852 aa17.54■□□□□ 0.4
CAPN1-213ENST00000527897 FBXO47Q5MNV8 452 aa17.54■□□□□ 0.4
CAPN1-213ENST00000527897 MIER3Q7Z3K6 550 aa17.54■□□□□ 0.4
CAPN1-213ENST00000527897 SPRED2Q7Z698 418 aa17.54■□□□□ 0.4
CAPN1-213ENST00000527897 NEK8Q86SG6 692 aa17.54■□□□□ 0.4
CAPN1-213ENST00000527897 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.54■□□□□ 0.4
CAPN1-213ENST00000527897 METTL13Q8N6R0 699 aa17.54■□□□□ 0.4
CAPN1-213ENST00000527897 BBXQ8WY36 941 aaPredicted RBP17.54■□□□□ 0.4
CAPN1-213ENST00000527897 BRMS1Q9HCU9 246 aa17.54■□□□□ 0.4
CAPN1-213ENST00000527897 MAFBQ9Y5Q3 323 aaPredicted RBP17.54■□□□□ 0.4
CAPN1-213ENST00000527897 TRPV2Q9Y5S1 764 aa17.54■□□□□ 0.4
CAPN1-213ENST00000527897 CYP3A7-CYP3A51PA0A087WV96 503 aa17.53■□□□□ 0.4
CAPN1-213ENST00000527897 SMIM35A0A1B0GVV1 85 aa17.53■□□□□ 0.4
CAPN1-213ENST00000527897 SLC37A4O43826 429 aa17.53■□□□□ 0.4
CAPN1-213ENST00000527897 MARCH6O60337 910 aa17.53■□□□□ 0.4
CAPN1-213ENST00000527897 CCNT1O60563 726 aaKnown RBP17.53■□□□□ 0.4
CAPN1-213ENST00000527897 RPLP2P05387 115 aaKnown RBP17.53■□□□□ 0.4
CAPN1-213ENST00000527897 IBSPP21815 317 aaPredicted RBP17.53■□□□□ 0.4
CAPN1-213ENST00000527897 CYP3A7P24462 503 aa17.53■□□□□ 0.4
CAPN1-213ENST00000527897 CD52P31358 61 aa17.53■□□□□ 0.4
CAPN1-213ENST00000527897 KRT2P35908 639 aa17.53■□□□□ 0.4
CAPN1-213ENST00000527897 JAK3P52333 1124 aa17.53■□□□□ 0.4
CAPN1-213ENST00000527897 NR5A1Q13285 461 aa17.53■□□□□ 0.4
CAPN1-213ENST00000527897 TSHZ1Q6ZSZ6 1077 aa17.53■□□□□ 0.4
CAPN1-213ENST00000527897 CCDC83Q8IWF9 413 aa17.53■□□□□ 0.4
CAPN1-213ENST00000527897 COL1A2P08123 1366 aa17.53■□□□□ 0.4
CAPN1-213ENST00000527897 TRANK1O15050 2925 aa17.52■□□□□ 0.4
CAPN1-213ENST00000527897 IGSF9BQ9UPX0 1349 aa17.52■□□□□ 0.4
CAPN1-213ENST00000527897 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.52■□□□□ 0.4
CAPN1-213ENST00000527897 FAM205CA6NFA0 338 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms