RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 COL4A5P29400 1685 aa13.69□□□□□ -0.22
CAPN1-208ENST00000527323 TMCO5BA8MYB1 307 aa13.69□□□□□ -0.22
CAPN1-208ENST00000527323 HMGB1P1B2RPK0 211 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-208ENST00000527323 NOL4O94818 638 aa13.69□□□□□ -0.22
CAPN1-208ENST00000527323 CDK8P49336 464 aa13.69□□□□□ -0.22
CAPN1-208ENST00000527323 CACNB1Q02641 598 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-208ENST00000527323 NBPF9Q3BBW0 867 aa13.69□□□□□ -0.22
CAPN1-208ENST00000527323 TEKT1Q969V4 418 aa13.69□□□□□ -0.22
CAPN1-208ENST00000527323 CABS1Q96KC9 395 aa13.69□□□□□ -0.22
CAPN1-208ENST00000527323 GOLPH3Q9H4A6 298 aa13.69□□□□□ -0.22
CAPN1-208ENST00000527323 USP17L5A8MUK1 530 aa13.69□□□□□ -0.22
CAPN1-208ENST00000527323 GCOM1H8Y6P7 765 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-208ENST00000527323 RBAK-RBAKDNI3L0D1 243 aa13.69□□□□□ -0.22
CAPN1-208ENST00000527323 NFKBIEO00221 500 aa13.69□□□□□ -0.22
CAPN1-208ENST00000527323 MYZAPP0CAP1 466 aa13.69□□□□□ -0.22
CAPN1-208ENST00000527323 FXR2P51116 673 aaKnown RBP eCLIP13.69□□□□□ -0.221e-6■■■□□ 14.6
CAPN1-208ENST00000527323 ADCY7P51828 1080 aa13.69□□□□□ -0.22
CAPN1-208ENST00000527323 HDLBPQ00341 1268 aaKnown RBP13.69□□□□□ -0.22
CAPN1-208ENST00000527323 PRKG1Q13976 671 aa13.69□□□□□ -0.22
CAPN1-208ENST00000527323 KCTD19Q17RG1 926 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-208ENST00000527323 KCNV1Q6PIU1 500 aa13.69□□□□□ -0.22
CAPN1-208ENST00000527323 DDX42Q86XP3 938 aaKnown RBP eCLIP13.69□□□□□ -0.22
CAPN1-208ENST00000527323 LRRC47Q8N1G4 583 aaKnown RBP13.69□□□□□ -0.22
CAPN1-208ENST00000527323 KCTD17Q8N5Z5 321 aa13.69□□□□□ -0.22
CAPN1-208ENST00000527323 USP38Q8NB14 1042 aa13.69□□□□□ -0.22
CAPN1-208ENST00000527323 OR2W6PQ8NHA6 318 aa13.69□□□□□ -0.22
CAPN1-208ENST00000527323 AP1M1Q9BXS5 423 aa13.69□□□□□ -0.22
CAPN1-208ENST00000527323 KRT18P05783 430 aaKnown RBP13.68□□□□□ -0.22
CAPN1-208ENST00000527323 GSTO1P78417 241 aa13.68□□□□□ -0.22
CAPN1-208ENST00000527323 CXCL9Q07325 125 aa13.68□□□□□ -0.22
CAPN1-208ENST00000527323 HERC4Q5GLZ8 1057 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-208ENST00000527323 ARFGAP2Q8N6H7 521 aa13.68□□□□□ -0.22
CAPN1-208ENST00000527323 MYCBPAPQ8TBZ2 947 aa13.68□□□□□ -0.22
CAPN1-208ENST00000527323 SYN2Q92777 582 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-208ENST00000527323 INPP4AQ96PE3 977 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-208ENST00000527323 SPAG5Q96R06 1193 aa13.68□□□□□ -0.22
CAPN1-208ENST00000527323 NCAPGQ9BPX3 1015 aa13.68□□□□□ -0.22
CAPN1-208ENST00000527323 TAF1DQ9H5J8 278 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-208ENST00000527323 GPR75-ASB3A0A0A6YYF3 556 aa13.68□□□□□ -0.22
CAPN1-208ENST00000527323 LDHCP07864 332 aa13.68□□□□□ -0.22
CAPN1-208ENST00000527323 PDIA5Q14554 519 aa13.68□□□□□ -0.22
CAPN1-208ENST00000527323 TBC1D10BQ4KMP7 808 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-208ENST00000527323 PODNQ7Z5L7 613 aa13.68□□□□□ -0.22
CAPN1-208ENST00000527323 DNAAF5Q86Y56 855 aa13.68□□□□□ -0.22
CAPN1-208ENST00000527323 CD302Q8IX05 232 aa13.68□□□□□ -0.22
CAPN1-208ENST00000527323 CNPY4Q8N129 248 aa13.68□□□□□ -0.22
CAPN1-208ENST00000527323 MREGQ8N565 214 aa13.68□□□□□ -0.22
CAPN1-208ENST00000527323 CEP95Q96GE4 821 aa13.68□□□□□ -0.22
CAPN1-208ENST00000527323 MYCBPQ99417 103 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-208ENST00000527323 LOC102724159A0A0B4J2E5 919 aa13.67□□□□□ -0.22
CAPN1-208ENST00000527323 TAL1P17542 331 aaPredicted RBP13.67□□□□□ -0.22
CAPN1-208ENST00000527323 CTNNA1P35221 906 aaKnown RBP13.67□□□□□ -0.22
CAPN1-208ENST00000527323 ADAM9Q13443 819 aa13.67□□□□□ -0.22
CAPN1-208ENST00000527323 PWP2Q15269 919 aaKnown RBP13.67□□□□□ -0.22
CAPN1-208ENST00000527323 SWT1Q5T5J6 900 aaKnown RBP13.67□□□□□ -0.22
CAPN1-208ENST00000527323 UBLCP1Q8WVY7 318 aaPredicted RBP13.67□□□□□ -0.22
CAPN1-208ENST00000527323 GPCPD1Q9NPB8 672 aa13.67□□□□□ -0.22
CAPN1-208ENST00000527323 PCDHGC5Q9Y5F6 944 aa13.67□□□□□ -0.22
CAPN1-208ENST00000527323 NT5C2P49902 561 aa13.67□□□□□ -0.22
CAPN1-208ENST00000527323 PRPF38AQ8NAV1 312 aaKnown RBP13.67□□□□□ -0.22
CAPN1-208ENST00000527323 CEP350Q5VT06 3117 aa13.67□□□□□ -0.22
CAPN1-208ENST00000527323 ERVK-9P63128 1117 aa13.67□□□□□ -0.22
CAPN1-208ENST00000527323 ITGB3BPQ13352 177 aaPredicted RBP13.67□□□□□ -0.22
CAPN1-208ENST00000527323 ORC2Q13416 577 aaPredicted RBP13.67□□□□□ -0.22
CAPN1-208ENST00000527323 ZYXQ15942 572 aaKnown RBP13.67□□□□□ -0.22
CAPN1-208ENST00000527323 ECM1Q16610 540 aa13.67□□□□□ -0.22
CAPN1-208ENST00000527323 CCDC121Q6ZUS5 278 aa13.67□□□□□ -0.22
CAPN1-208ENST00000527323 CCDC65Q8IXS2 484 aa13.67□□□□□ -0.22
CAPN1-208ENST00000527323 NEDD1Q8NHV4 660 aa13.67□□□□□ -0.22
CAPN1-208ENST00000527323 LRRC45Q96CN5 670 aa13.67□□□□□ -0.22
CAPN1-208ENST00000527323 TAOK3Q9H2K8 898 aa13.67□□□□□ -0.22
CAPN1-208ENST00000527323 TMBIM4Q9HC24 238 aa13.67□□□□□ -0.22
CAPN1-208ENST00000527323 GNA14O95837 355 aa13.66□□□□□ -0.22
CAPN1-208ENST00000527323 FAM107AO95990 144 aa13.66□□□□□ -0.22
CAPN1-208ENST00000527323 ACTN1P12814 892 aa13.66□□□□□ -0.22
CAPN1-208ENST00000527323 AKR1B1P15121 316 aa13.66□□□□□ -0.22
CAPN1-208ENST00000527323 HSD17B3P37058 310 aa13.66□□□□□ -0.22
CAPN1-208ENST00000527323 HSPA9P38646 679 aaKnown RBP13.66□□□□□ -0.22
CAPN1-208ENST00000527323 SNAP25P60880 206 aa13.66□□□□□ -0.22
CAPN1-208ENST00000527323 UBE2SQ16763 222 aa13.66□□□□□ -0.22
CAPN1-208ENST00000527323 NIM1KQ8IY84 436 aa13.66□□□□□ -0.22
CAPN1-208ENST00000527323 TBC1D22AQ8WUA7 517 aa13.66□□□□□ -0.22
CAPN1-208ENST00000527323 JPH2Q9BR39 696 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-208ENST00000527323 FGFBP2Q9BYJ0 223 aa13.66□□□□□ -0.22
CAPN1-208ENST00000527323 ISCUQ9H1K1 167 aa13.66□□□□□ -0.22
CAPN1-208ENST00000527323 GEMIN8Q9NWZ8 242 aaKnown RBP13.66□□□□□ -0.22
CAPN1-208ENST00000527323 PCDHA12Q9UN75 941 aa13.66□□□□□ -0.22
CAPN1-208ENST00000527323 NPHP3-ACAD11A0A0J9YXS1 232 aa13.66□□□□□ -0.22
CAPN1-208ENST00000527323 GOLGA6L7A0A1B0GV03 622 aa13.66□□□□□ -0.22
CAPN1-208ENST00000527323 E9PMD0 336 aa13.66□□□□□ -0.22
CAPN1-208ENST00000527323 FSBPO95073 299 aa13.66□□□□□ -0.22
CAPN1-208ENST00000527323 KIF4AO95239 1232 aa13.66□□□□□ -0.22
CAPN1-208ENST00000527323 KCNH2Q12809 1159 aa13.66□□□□□ -0.22
CAPN1-208ENST00000527323 DNAJC19Q96DA6 116 aa13.66□□□□□ -0.22
CAPN1-208ENST00000527323 CEP63Q96MT8 703 aa13.66□□□□□ -0.22
CAPN1-208ENST00000527323 TMEM39BQ9GZU3 492 aa13.66□□□□□ -0.22
CAPN1-208ENST00000527323 DDX25Q9UHL0 483 aaKnown RBP13.66□□□□□ -0.22
CAPN1-208ENST00000527323 KIAA1024Q9UPX6 916 aa13.66□□□□□ -0.22
CAPN1-208ENST00000527323 DLEC1Q9Y238 1755 aa13.66□□□□□ -0.22
CAPN1-208ENST00000527323 CETN3O15182 167 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms