RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 PCDHA10Q9Y5I2 948 aa20.93■□□□□ 0.94
SMPD1-203ENST00000527275 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.92■□□□□ 0.94
SMPD1-203ENST00000527275 TMEM119Q4V9L6 283 aa20.92■□□□□ 0.94
SMPD1-203ENST00000527275 CELF3Q5SZQ8 465 aaKnown RBP20.92■□□□□ 0.94
SMPD1-203ENST00000527275 SMAP1Q8IYB5 467 aaPredicted RBP20.92■□□□□ 0.94
SMPD1-203ENST00000527275 BLOC1S4Q9NUP1 217 aa20.92■□□□□ 0.94
SMPD1-203ENST00000527275 KBTBD4Q9NVX7 518 aa20.92■□□□□ 0.94
SMPD1-203ENST00000527275 WRAP73Q9P2S5 460 aaPredicted RBP20.92■□□□□ 0.94
SMPD1-203ENST00000527275 RPN1P04843 607 aaKnown RBP20.92■□□□□ 0.94
SMPD1-203ENST00000527275 HOXD10P28358 340 aa20.92■□□□□ 0.94
SMPD1-203ENST00000527275 LXNQ9BS40 222 aa20.92■□□□□ 0.94
SMPD1-203ENST00000527275 TUFT1Q9NNX1 390 aa20.92■□□□□ 0.94
SMPD1-203ENST00000527275 RMND1Q9NWS8 449 aa20.92■□□□□ 0.94
SMPD1-203ENST00000527275 MYL1P05976 194 aa20.91■□□□□ 0.94
SMPD1-203ENST00000527275 ZNF865P0CJ78 1059 aaPredicted RBP20.91■□□□□ 0.94
SMPD1-203ENST00000527275 CD44P16070 742 aaKnown RBP20.91■□□□□ 0.94
SMPD1-203ENST00000527275 HSDL1Q3SXM5 330 aa20.91■□□□□ 0.94
SMPD1-203ENST00000527275 DHX37Q8IY37 1157 aaKnown RBP20.91■□□□□ 0.94
SMPD1-203ENST00000527275 MED15Q96RN5 788 aa20.91■□□□□ 0.94
SMPD1-203ENST00000527275 MAGEF1Q9HAY2 307 aa20.91■□□□□ 0.94
SMPD1-203ENST00000527275 NFE2L3Q9Y4A8 694 aa20.91■□□□□ 0.94
SMPD1-203ENST00000527275 PPP1R3GB7ZBB8 358 aa20.9■□□□□ 0.94
SMPD1-203ENST00000527275 E9PMD0 336 aa20.9■□□□□ 0.94
SMPD1-203ENST00000527275 ADCY6O43306 1168 aa20.9■□□□□ 0.94
SMPD1-203ENST00000527275 SLC26A4O43511 780 aa20.9■□□□□ 0.94
SMPD1-203ENST00000527275 P4HBP07237 508 aaKnown RBP20.9■□□□□ 0.94
SMPD1-203ENST00000527275 PSMC6P62333 389 aa20.9■□□□□ 0.94
SMPD1-203ENST00000527275 TRMT44Q8IYL2 757 aaKnown RBP20.9■□□□□ 0.94
SMPD1-203ENST00000527275 RDM1Q8NG50 284 aa20.9■□□□□ 0.94
SMPD1-203ENST00000527275 STK17AQ9UEE5 414 aa20.9■□□□□ 0.94
SMPD1-203ENST00000527275 SERPINC1P01008 464 aa20.9■□□□□ 0.94
SMPD1-203ENST00000527275 GNRH1P01148 92 aa20.9■□□□□ 0.94
SMPD1-203ENST00000527275 SMPD1P17405 629 aa20.9■□□□□ 0.94
SMPD1-203ENST00000527275 ABHD15Q6UXT9 468 aa20.9■□□□□ 0.94
SMPD1-203ENST00000527275 SMYD4Q8IYR2 804 aaPredicted RBP20.9■□□□□ 0.94
SMPD1-203ENST00000527275 CASP8AP2Q9UKL3 1982 aa20.9■□□□□ 0.94
SMPD1-203ENST00000527275 ELNP15502 786 aa20.89■□□□□ 0.94
SMPD1-203ENST00000527275 QARSP47897 775 aaKnown RBP20.89■□□□□ 0.94
SMPD1-203ENST00000527275 DHX8Q14562 1220 aaKnown RBP20.89■□□□□ 0.94
SMPD1-203ENST00000527275 DUSP28Q4G0W2 176 aa20.89■□□□□ 0.94
SMPD1-203ENST00000527275 IQSEC1Q6DN90 963 aa20.89■□□□□ 0.94
SMPD1-203ENST00000527275 KLHL10Q6JEL2 608 aa20.89■□□□□ 0.94
SMPD1-203ENST00000527275 NEK9Q8TD19 979 aa20.89■□□□□ 0.94
SMPD1-203ENST00000527275 LARP4BQ92615 738 aaKnown RBP20.89■□□□□ 0.94
SMPD1-203ENST00000527275 SPATA33Q96N06 139 aa20.89■□□□□ 0.94
SMPD1-203ENST00000527275 ZBTB39O15060 712 aa20.89■□□□□ 0.93
SMPD1-203ENST00000527275 ATG7O95352 703 aa20.89■□□□□ 0.93
SMPD1-203ENST00000527275 UBASH3AP57075 661 aa20.89■□□□□ 0.93
SMPD1-203ENST00000527275 ARHGAP1Q07960 439 aa20.89■□□□□ 0.93
SMPD1-203ENST00000527275 IRF5Q13568 498 aa20.89■□□□□ 0.93
SMPD1-203ENST00000527275 UGCGQ16739 394 aa20.89■□□□□ 0.93
SMPD1-203ENST00000527275 ZNF658Q5TYW1 1059 aaPredicted RBP20.89■□□□□ 0.93
SMPD1-203ENST00000527275 SWSAP1Q6NVH7 229 aa20.89■□□□□ 0.93
SMPD1-203ENST00000527275 CCDC60Q8IWA6 550 aaPredicted RBP20.89■□□□□ 0.93
SMPD1-203ENST00000527275 PIGOQ8TEQ8 1089 aa20.89■□□□□ 0.93
SMPD1-203ENST00000527275 RAD54LQ92698 747 aa20.89■□□□□ 0.93
SMPD1-203ENST00000527275 DNM3Q9UQ16 869 aa20.89■□□□□ 0.93
SMPD1-203ENST00000527275 GSTTP1A0A1W2PQM5 241 aa20.88■□□□□ 0.93
SMPD1-203ENST00000527275 CBFA2T2O43439 604 aa20.88■□□□□ 0.93
SMPD1-203ENST00000527275 PSAPP07602 524 aa20.88■□□□□ 0.93
SMPD1-203ENST00000527275 TNFAIP2Q03169 654 aa20.88■□□□□ 0.93
SMPD1-203ENST00000527275 MCM6Q14566 821 aa20.88■□□□□ 0.93
SMPD1-203ENST00000527275 MFSD14CQ5VZR4 134 aa20.88■□□□□ 0.93
SMPD1-203ENST00000527275 MIS18BP1Q6P0N0 1132 aa20.88■□□□□ 0.93
SMPD1-203ENST00000527275 FILIP1Q7Z7B0 1213 aa20.88■□□□□ 0.93
SMPD1-203ENST00000527275 ZSWIM4Q9H7M6 989 aa20.88■□□□□ 0.93
SMPD1-203ENST00000527275 GABBR1Q9UBS5 961 aa20.88■□□□□ 0.93
SMPD1-203ENST00000527275 NOP56O00567 594 aaKnown RBP20.87■□□□□ 0.93
SMPD1-203ENST00000527275 GH1P01241 217 aa20.87■□□□□ 0.93
SMPD1-203ENST00000527275 SUPT20HL2P0C7V6 817 aa20.87■□□□□ 0.93
SMPD1-203ENST00000527275 ZNF18P17022 549 aa20.87■□□□□ 0.93
SMPD1-203ENST00000527275 CDK11BP21127 795 aaKnown RBP20.87■□□□□ 0.93
SMPD1-203ENST00000527275 TRIM32Q13049 653 aa20.87■□□□□ 0.93
SMPD1-203ENST00000527275 ARHGEF6Q15052 776 aa20.87■□□□□ 0.93
SMPD1-203ENST00000527275 TRMT1LQ7Z2T5 733 aaKnown RBP20.87■□□□□ 0.93
SMPD1-203ENST00000527275 SEPT1Q8WYJ6 367 aa20.87■□□□□ 0.93
SMPD1-203ENST00000527275 GPR20Q99678 358 aa20.87■□□□□ 0.93
SMPD1-203ENST00000527275 WDR81Q562E7 1941 aa20.87■□□□□ 0.93
SMPD1-203ENST00000527275 BACH1O14867 736 aa20.87■□□□□ 0.93
SMPD1-203ENST00000527275 MUTP22033 750 aa20.87■□□□□ 0.93
SMPD1-203ENST00000527275 TCF7P36402 384 aaPredicted RBP20.87■□□□□ 0.93
SMPD1-203ENST00000527275 STX17P56962 302 aa20.87■□□□□ 0.93
SMPD1-203ENST00000527275 PSMC5P62195 406 aa20.87■□□□□ 0.93
SMPD1-203ENST00000527275 LAMC2Q13753 1193 aa20.87■□□□□ 0.93
SMPD1-203ENST00000527275 SPATA1Q5VX52 437 aa20.87■□□□□ 0.93
SMPD1-203ENST00000527275 RAET1EQ8TD07 263 aa20.87■□□□□ 0.93
SMPD1-203ENST00000527275 IMPACTQ9P2X3 320 aa20.87■□□□□ 0.93
SMPD1-203ENST00000527275 ADCY3O60266 1144 aa20.86■□□□□ 0.93
SMPD1-203ENST00000527275 AMPD3Q01432 767 aa20.86■□□□□ 0.93
SMPD1-203ENST00000527275 KCNB1Q14721 858 aa20.86■□□□□ 0.93
SMPD1-203ENST00000527275 HSP90AA4PQ58FG1 418 aa20.86■□□□□ 0.93
SMPD1-203ENST00000527275 SV2BQ7L1I2 683 aa20.86■□□□□ 0.93
SMPD1-203ENST00000527275 TRPV1Q8NER1 839 aa20.86■□□□□ 0.93
SMPD1-203ENST00000527275 CACTINQ8WUQ7 758 aaKnown RBP20.86■□□□□ 0.93
SMPD1-203ENST00000527275 NACC1Q96RE7 527 aa20.86■□□□□ 0.93
SMPD1-203ENST00000527275 BHMT2Q9H2M3 363 aa20.86■□□□□ 0.93
SMPD1-203ENST00000527275 IGKV6D-21A0A0A0MT36 114 aa20.86■□□□□ 0.93
SMPD1-203ENST00000527275 KLRC4O43908 158 aa20.86■□□□□ 0.93
SMPD1-203ENST00000527275 SSBP05455 408 aaKnown RBP eCLIP20.86■□□□□ 0.93
SMPD1-203ENST00000527275 PLA2G4BP0C869 781 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms