RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 TRPC6Q9Y210 931 aa21.43■■□□□ 1.02
CAPN1-206ENST00000526966 PCDHA2Q9Y5H9 948 aa21.43■■□□□ 1.02
CAPN1-206ENST00000526966 MRPL42Q9Y6G3 142 aaKnown RBP21.43■■□□□ 1.02
CAPN1-206ENST00000526966 KDM3AQ9Y4C1 1321 aa21.43■■□□□ 1.02
CAPN1-206ENST00000526966 WDFY4Q6ZS81 3184 aa21.42■■□□□ 1.02
CAPN1-206ENST00000526966 MBTPS2O43462 519 aa21.42■■□□□ 1.02
CAPN1-206ENST00000526966 NAALADL2Q58DX5 795 aa21.42■■□□□ 1.02
CAPN1-206ENST00000526966 PPP1R18Q6NYC8 613 aa21.42■■□□□ 1.02
CAPN1-206ENST00000526966 TRAPPC12Q8WVT3 735 aa21.42■■□□□ 1.02
CAPN1-206ENST00000526966 SDF4Q9BRK5 362 aa21.42■■□□□ 1.02
CAPN1-206ENST00000526966 ALG13Q9NP73 1137 aaKnown RBP21.42■■□□□ 1.02
CAPN1-206ENST00000526966 PADI3Q9ULW8 664 aa21.42■■□□□ 1.02
CAPN1-206ENST00000526966 MYH9P35579 1960 aaKnown RBP21.41■■□□□ 1.02
CAPN1-206ENST00000526966 SMIM35A0A1B0GVV1 85 aa21.41■■□□□ 1.02
CAPN1-206ENST00000526966 M0QZ92 97 aa21.41■■□□□ 1.02
CAPN1-206ENST00000526966 ATG7O95352 703 aa21.41■■□□□ 1.02
CAPN1-206ENST00000526966 ARP10275 920 aa21.41■■□□□ 1.02
CAPN1-206ENST00000526966 GTF2F1P35269 517 aaKnown RBP eCLIP21.41■■□□□ 1.024e-13■■■■□ 21.8
CAPN1-206ENST00000526966 IRS1P35568 1242 aa21.41■■□□□ 1.02
CAPN1-206ENST00000526966 STAT5BP51692 787 aa21.41■■□□□ 1.02
CAPN1-206ENST00000526966 ITGB3BPQ13352 177 aaPredicted RBP21.41■■□□□ 1.02
CAPN1-206ENST00000526966 SMAD4Q13485 552 aaKnown RBP21.41■■□□□ 1.02
CAPN1-206ENST00000526966 APOA5Q6Q788 366 aa21.41■■□□□ 1.02
CAPN1-206ENST00000526966 CELF4Q9BZC1 486 aaKnown RBP21.41■■□□□ 1.02
CAPN1-206ENST00000526966 RIC8AQ9NPQ8 531 aa21.41■■□□□ 1.02
CAPN1-206ENST00000526966 TECTAO75443 2155 aa21.41■■□□□ 1.02
CAPN1-206ENST00000526966 WDR81Q562E7 1941 aa21.4■■□□□ 1.02
CAPN1-206ENST00000526966 LINC01565O15544 149 aa21.4■■□□□ 1.02
CAPN1-206ENST00000526966 FOSP01100 380 aaPredicted RBP21.4■■□□□ 1.02
CAPN1-206ENST00000526966 ITGB1P05556 798 aa21.4■■□□□ 1.02
CAPN1-206ENST00000526966 SCG2P13521 617 aa21.4■■□□□ 1.02
CAPN1-206ENST00000526966 DNAJB1P25685 340 aa21.4■■□□□ 1.02
CAPN1-206ENST00000526966 TMEM62Q0P6H9 643 aa21.4■■□□□ 1.02
CAPN1-206ENST00000526966 FUT2Q10981 343 aa21.4■■□□□ 1.02
CAPN1-206ENST00000526966 PAK2Q13177 524 aa21.4■■□□□ 1.02
CAPN1-206ENST00000526966 ADAM15Q13444 863 aa21.4■■□□□ 1.02
CAPN1-206ENST00000526966 CLUL1Q15846 466 aa21.4■■□□□ 1.02
CAPN1-206ENST00000526966 CSPP1Q1MSJ5 1256 aa21.4■■□□□ 1.02
CAPN1-206ENST00000526966 CEP55Q53EZ4 464 aa21.4■■□□□ 1.02
CAPN1-206ENST00000526966 POP1Q99575 1024 aaKnown RBP21.4■■□□□ 1.02
CAPN1-206ENST00000526966 ANO3Q9BYT9 981 aa21.4■■□□□ 1.02
CAPN1-206ENST00000526966 AGO4Q9HCK5 861 aaKnown RBP21.4■■□□□ 1.02
CAPN1-206ENST00000526966 RBM28Q9NW13 759 aaKnown RBP21.4■■□□□ 1.02
CAPN1-206ENST00000526966 IGKV6D-21A0A0A0MT36 114 aa21.39■■□□□ 1.01
CAPN1-206ENST00000526966 STAG3L1P0CL83 205 aa21.39■■□□□ 1.01
CAPN1-206ENST00000526966 SLC26A2P50443 739 aa21.39■■□□□ 1.01
CAPN1-206ENST00000526966 NAPAP54920 295 aa21.39■■□□□ 1.01
CAPN1-206ENST00000526966 MTHFD1LQ6UB35 978 aa21.39■■□□□ 1.01
CAPN1-206ENST00000526966 FAM43BQ6ZT52 329 aaPredicted RBP21.39■■□□□ 1.01
CAPN1-206ENST00000526966 NME8Q8N427 588 aa21.39■■□□□ 1.01
CAPN1-206ENST00000526966 SPPL3Q8TCT6 385 aa21.39■■□□□ 1.01
CAPN1-206ENST00000526966 PGBD1Q96JS3 809 aa21.39■■□□□ 1.01
CAPN1-206ENST00000526966 MSLNLQ96KJ4 702 aa21.39■■□□□ 1.01
CAPN1-206ENST00000526966 UPF3BQ9BZI7 483 aaKnown RBP21.39■■□□□ 1.01
CAPN1-206ENST00000526966 TMX1Q9H3N1 280 aa21.39■■□□□ 1.01
CAPN1-206ENST00000526966 CD207Q9UJ71 328 aa21.39■■□□□ 1.01
CAPN1-206ENST00000526966 hCG_1984214I3L0E3 225 aa21.38■■□□□ 1.01
CAPN1-206ENST00000526966 MEIS1O00470 390 aa21.38■■□□□ 1.01
CAPN1-206ENST00000526966 SREBF1P36956 1147 aa21.38■■□□□ 1.01
CAPN1-206ENST00000526966 CLK2P49760 499 aaKnown RBP21.38■■□□□ 1.01
CAPN1-206ENST00000526966 KRT76Q01546 638 aa21.38■■□□□ 1.01
CAPN1-206ENST00000526966 AP3B2Q13367 1082 aa21.38■■□□□ 1.01
CAPN1-206ENST00000526966 ZNF713Q8N859 430 aaPredicted RBP21.38■■□□□ 1.01
CAPN1-206ENST00000526966 KLHL23Q8NBE8 558 aa21.38■■□□□ 1.01
CAPN1-206ENST00000526966 PPP2R3CQ969Q6 453 aa21.38■■□□□ 1.01
CAPN1-206ENST00000526966 UIMC1Q96RL1 719 aa21.38■■□□□ 1.01
CAPN1-206ENST00000526966 IGFLR1Q9H665 355 aa21.38■■□□□ 1.01
CAPN1-206ENST00000526966 ANO2Q9NQ90 1003 aa21.38■■□□□ 1.01
CAPN1-206ENST00000526966 STXBP3O00186 592 aa21.37■■□□□ 1.01
CAPN1-206ENST00000526966 CSPG5O95196 566 aa21.37■■□□□ 1.01
CAPN1-206ENST00000526966 EYA4O95677 639 aa21.37■■□□□ 1.01
CAPN1-206ENST00000526966 CCNE2O96020 404 aa21.37■■□□□ 1.01
CAPN1-206ENST00000526966 ADCY7P51828 1080 aa21.37■■□□□ 1.01
CAPN1-206ENST00000526966 PAN2Q504Q3 1202 aaKnown RBP21.37■■□□□ 1.01
CAPN1-206ENST00000526966 SYNE3Q6ZMZ3 975 aa21.37■■□□□ 1.01
CAPN1-206ENST00000526966 NIPA1Q7RTP0 329 aa21.37■■□□□ 1.01
CAPN1-206ENST00000526966 ADGRD2Q7Z7M1 963 aa21.37■■□□□ 1.01
CAPN1-206ENST00000526966 COL1A2P08123 1366 aa21.36■■□□□ 1.01
CAPN1-206ENST00000526966 SARSP49591 514 aaKnown RBP21.36■■□□□ 1.01
CAPN1-206ENST00000526966 GATMP50440 423 aa21.36■■□□□ 1.01
CAPN1-206ENST00000526966 IRX6P78412 446 aaPredicted RBP21.36■■□□□ 1.01
CAPN1-206ENST00000526966 EXOSC10Q01780 885 aaKnown RBP21.36■■□□□ 1.01
CAPN1-206ENST00000526966 RTN1Q16799 776 aa21.36■■□□□ 1.01
CAPN1-206ENST00000526966 HERC4Q5GLZ8 1057 aaPredicted RBP21.36■■□□□ 1.01
CAPN1-206ENST00000526966 ABHD15Q6UXT9 468 aa21.36■■□□□ 1.01
CAPN1-206ENST00000526966 EFHBQ8N7U6 833 aa21.36■■□□□ 1.01
CAPN1-206ENST00000526966 ATP8B4Q8TF62 1192 aa21.36■■□□□ 1.01
CAPN1-206ENST00000526966 POF1BQ8WVV4 589 aa21.36■■□□□ 1.01
CAPN1-206ENST00000526966 KCNH6Q9H252 994 aa21.36■■□□□ 1.01
CAPN1-206ENST00000526966 ERVK-5Q9HDB9 667 aa21.36■■□□□ 1.01
CAPN1-206ENST00000526966 BARHL2Q9NY43 387 aa21.36■■□□□ 1.01
CAPN1-206ENST00000526966 CLEC1BQ9P126 229 aa21.36■■□□□ 1.01
CAPN1-206ENST00000526966 BRPF3Q9ULD4 1205 aa21.36■■□□□ 1.01
CAPN1-206ENST00000526966 HBP1O60381 514 aa21.35■■□□□ 1.01
CAPN1-206ENST00000526966 KLRC1P26715 233 aa21.35■■□□□ 1.01
CAPN1-206ENST00000526966 NDUFV1P49821 464 aa21.35■■□□□ 1.01
CAPN1-206ENST00000526966 TMEM266Q2M3C6 531 aa21.35■■□□□ 1.01
CAPN1-206ENST00000526966 CCDC60Q8IWA6 550 aaPredicted RBP21.35■■□□□ 1.01
CAPN1-206ENST00000526966 SMRP1Q8NCR6 262 aa21.35■■□□□ 1.01
CAPN1-206ENST00000526966 NEK1Q96PY6 1258 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms