RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 SBNO2Q9Y2G9 1366 aa5.43□□□□□ -1.54
CD44-219ENST00000525685 TCRBV5S4A2TA0A5A2 114 aa5.43□□□□□ -1.54
CD44-219ENST00000525685 ACOT7O00154 380 aa5.43□□□□□ -1.54
CD44-219ENST00000525685 KCNQ2O43526 872 aa5.43□□□□□ -1.54
CD44-219ENST00000525685 DNAJC8O75937 253 aaPredicted RBP5.43□□□□□ -1.54
CD44-219ENST00000525685 CKMP06732 381 aa5.43□□□□□ -1.54
CD44-219ENST00000525685 SART3Q15020 963 aaKnown RBP5.43□□□□□ -1.54
CD44-219ENST00000525685 ZNF827Q17R98 1081 aa5.43□□□□□ -1.54
CD44-219ENST00000525685 SKIDA1Q1XH10 827 aa5.43□□□□□ -1.54
CD44-219ENST00000525685 PHF19Q5T6S3 580 aa5.43□□□□□ -1.54
CD44-219ENST00000525685 PIK3R6Q5UE93 754 aa5.43□□□□□ -1.54
CD44-219ENST00000525685 CD276Q5ZPR3 534 aa5.43□□□□□ -1.54
CD44-219ENST00000525685 TRMT10BQ6PF06 316 aaKnown RBP5.43□□□□□ -1.54
CD44-219ENST00000525685 C16orf59Q7L2K0 433 aa5.43□□□□□ -1.54
CD44-219ENST00000525685 LRRTM3Q86VH5 581 aa5.43□□□□□ -1.54
CD44-219ENST00000525685 AHI1Q8N157 1196 aa5.43□□□□□ -1.54
CD44-219ENST00000525685 CISD2Q8N5K1 135 aaKnown RBP5.43□□□□□ -1.54
CD44-219ENST00000525685 CD244Q9BZW8 370 aa5.43□□□□□ -1.54
CD44-219ENST00000525685 CABP5Q9NP86 173 aa5.43□□□□□ -1.54
CD44-219ENST00000525685 INTS7Q9NVH2 962 aaKnown RBP5.43□□□□□ -1.54
CD44-219ENST00000525685 FTSJ1Q9UET6 329 aa5.43□□□□□ -1.54
CD44-219ENST00000525685 JAG2Q9Y219 1238 aa5.43□□□□□ -1.54
CD44-219ENST00000525685 ANKRD62A6NC57 917 aa5.42□□□□□ -1.54
CD44-219ENST00000525685 ARVCFO00192 962 aa5.42□□□□□ -1.54
CD44-219ENST00000525685 KPNA6O60684 536 aa5.42□□□□□ -1.54
CD44-219ENST00000525685 CHGBP05060 677 aa5.42□□□□□ -1.54
CD44-219ENST00000525685 MAGEA10P43363 369 aaPredicted RBP5.42□□□□□ -1.54
CD44-219ENST00000525685 ZNF460Q14592 562 aa5.42□□□□□ -1.54
CD44-219ENST00000525685 ARHGAP36Q6ZRI8 547 aa5.42□□□□□ -1.54
CD44-219ENST00000525685 PLEKHH3Q7Z736 793 aa5.42□□□□□ -1.54
CD44-219ENST00000525685 FILIP1Q7Z7B0 1213 aa5.42□□□□□ -1.54
CD44-219ENST00000525685 GGNQ86UU5 652 aa5.42□□□□□ -1.54
CD44-219ENST00000525685 OSTM1Q86WC4 334 aa5.42□□□□□ -1.54
CD44-219ENST00000525685 KLHL36Q8N4N3 616 aa5.42□□□□□ -1.54
CD44-219ENST00000525685 C2orf69Q8N8R5 385 aa5.42□□□□□ -1.54
CD44-219ENST00000525685 SPC25Q9HBM1 224 aa5.42□□□□□ -1.54
CD44-219ENST00000525685 SMPD4Q9NXE4 827 aa5.42□□□□□ -1.54
CD44-219ENST00000525685 ZKSCAN5Q9Y2L8 839 aa5.42□□□□□ -1.54
CD44-219ENST00000525685 PRKAB1Q9Y478 270 aa5.42□□□□□ -1.54
CD44-219ENST00000525685 PDS5BQ9NTI5 1447 aa5.41□□□□□ -1.54
CD44-219ENST00000525685 ZNF839A8K0R7 811 aa5.41□□□□□ -1.54
CD44-219ENST00000525685 LAMTOR5O43504 91 aa5.41□□□□□ -1.54
CD44-219ENST00000525685 DNAJC6O75061 913 aa5.41□□□□□ -1.54
CD44-219ENST00000525685 KRT37O76014 449 aa5.41□□□□□ -1.54
CD44-219ENST00000525685 KLHL18O94889 574 aa5.41□□□□□ -1.54
CD44-219ENST00000525685 NPTXRO95502 500 aa5.41□□□□□ -1.54
CD44-219ENST00000525685 KNG1P01042 644 aa5.41□□□□□ -1.54
CD44-219ENST00000525685 ENO2P09104 434 aaPredicted RBP5.41□□□□□ -1.54
CD44-219ENST00000525685 PDE6AP16499 860 aa5.41□□□□□ -1.54
CD44-219ENST00000525685 ADAM17P78536 824 aa5.41□□□□□ -1.54
CD44-219ENST00000525685 PFKPQ01813 784 aa5.41□□□□□ -1.54
CD44-219ENST00000525685 NFATC3Q12968 1075 aa5.41□□□□□ -1.54
CD44-219ENST00000525685 SURF1Q15526 300 aa5.41□□□□□ -1.54
CD44-219ENST00000525685 GPR19Q15760 415 aa5.41□□□□□ -1.54
CD44-219ENST00000525685 SMAD2Q15796 467 aaKnown RBP5.41□□□□□ -1.54
CD44-219ENST00000525685 CDCA2Q69YH5 1023 aaPredicted RBP5.41□□□□□ -1.54
CD44-219ENST00000525685 ZCCHC8Q6NZY4 707 aaKnown RBP5.41□□□□□ -1.54
CD44-219ENST00000525685 KBTBD2Q8IY47 623 aa5.41□□□□□ -1.54
CD44-219ENST00000525685 PPM1KQ8N3J5 372 aa5.41□□□□□ -1.54
CD44-219ENST00000525685 TTC9BQ8N6N2 239 aa5.41□□□□□ -1.54
CD44-219ENST00000525685 NUDT10Q8NFP7 164 aa5.41□□□□□ -1.54
CD44-219ENST00000525685 LEO1Q8WVC0 666 aaPredicted RBP5.41□□□□□ -1.54
CD44-219ENST00000525685 NUDT11Q96G61 164 aa5.41□□□□□ -1.54
CD44-219ENST00000525685 SAMD11Q96NU1 681 aa5.41□□□□□ -1.54
CD44-219ENST00000525685 KRTAP3-1Q9BYR8 98 aa5.41□□□□□ -1.54
CD44-219ENST00000525685 TMX1Q9H3N1 280 aa5.41□□□□□ -1.54
CD44-219ENST00000525685 KCND1Q9NSA2 647 aa5.41□□□□□ -1.54
CD44-219ENST00000525685 IFT57Q9NWB7 429 aa5.41□□□□□ -1.54
CD44-219ENST00000525685 PPP4R1LQ9P1A2 415 aa5.41□□□□□ -1.54
CD44-219ENST00000525685 ADAM29Q9UKF5 820 aa5.41□□□□□ -1.54
CD44-219ENST00000525685 SRPK3Q9UPE1 567 aa5.41□□□□□ -1.54
CD44-219ENST00000525685 ZNF536O15090 1300 aa5.41□□□□□ -1.54
CD44-219ENST00000525685 FANCD2Q9BXW9 1451 aa5.4□□□□□ -1.54
CD44-219ENST00000525685 CEP164Q9UPV0 1460 aa5.4□□□□□ -1.54
CD44-219ENST00000525685 M0R2C6 588 aa5.4□□□□□ -1.54
CD44-219ENST00000525685 PDE8AO60658 829 aa5.4□□□□□ -1.54
CD44-219ENST00000525685 GAS7O60861 476 aa5.4□□□□□ -1.54
CD44-219ENST00000525685 NCLP19338 710 aaKnown RBP5.4□□□□□ -1.54
CD44-219ENST00000525685 IBSPP21815 317 aaPredicted RBP5.4□□□□□ -1.54
CD44-219ENST00000525685 SOX5P35711 763 aa5.4□□□□□ -1.54
CD44-219ENST00000525685 GLRBP48167 497 aa5.4□□□□□ -1.54
CD44-219ENST00000525685 TM4SF20Q53R12 229 aa5.4□□□□□ -1.54
CD44-219ENST00000525685 ZNF662Q6ZS27 426 aa5.4□□□□□ -1.54
CD44-219ENST00000525685 LIMS2Q7Z4I7 341 aa5.4□□□□□ -1.54
CD44-219ENST00000525685 PTRH1Q86Y79 214 aaKnown RBP5.4□□□□□ -1.54
CD44-219ENST00000525685 NLGN4XQ8N0W4 816 aa5.4□□□□□ -1.54
CD44-219ENST00000525685 IGDCC4Q8TDY8 1250 aa5.4□□□□□ -1.54
CD44-219ENST00000525685 CHAC2Q8WUX2 184 aa5.4□□□□□ -1.54
CD44-219ENST00000525685 BORCS6Q96GS4 357 aa5.4□□□□□ -1.54
CD44-219ENST00000525685 TARS2Q9BW92 718 aaKnown RBP5.4□□□□□ -1.54
CD44-219ENST00000525685 KRTAP4-5Q9BYR2 181 aa5.4□□□□□ -1.54
CD44-219ENST00000525685 CELF4Q9BZC1 486 aaKnown RBP5.4□□□□□ -1.54
CD44-219ENST00000525685 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.4□□□□□ -1.54
CD44-219ENST00000525685 BARX1Q9HBU1 254 aaPredicted RBP5.4□□□□□ -1.54
CD44-219ENST00000525685 ARHGAP20Q9P2F6 1191 aa5.4□□□□□ -1.54
CD44-219ENST00000525685 ZFP69BQ9UJL9 534 aa5.4□□□□□ -1.54
CD44-219ENST00000525685 CBLCQ9ULV8 474 aa5.4□□□□□ -1.54
CD44-219ENST00000525685 MRC2Q9UBG0 1479 aa5.39□□□□□ -1.55
CD44-219ENST00000525685 WDR62O43379 1518 aa5.39□□□□□ -1.55
CD44-219ENST00000525685 FAM90A27PA6NNH2 459 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms