RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 JAMLQ86YT9 394 aa6.59□□□□□ -1.35
SVIP-202ENST00000525670 ZNF654Q8IZM8 581 aa6.59□□□□□ -1.35
SVIP-202ENST00000525670 C20orf173Q96LM9 149 aa6.59□□□□□ -1.35
SVIP-202ENST00000525670 TEX13AQ9BXU3 409 aaPredicted RBP6.59□□□□□ -1.35
SVIP-202ENST00000525670 EPB41L4AQ9HCS5 686 aaPredicted RBP6.59□□□□□ -1.35
SVIP-202ENST00000525670 ZNF214Q9UL59 606 aaPredicted RBP6.59□□□□□ -1.35
SVIP-202ENST00000525670 NIP7Q9Y221 180 aaKnown RBP eCLIP6.59□□□□□ -1.35
SVIP-202ENST00000525670 SF3B6Q9Y3B4 125 aaKnown RBP6.59□□□□□ -1.35
SVIP-202ENST00000525670 ZNF451Q9Y4E5 1061 aa6.59□□□□□ -1.35
SVIP-202ENST00000525670 ABCC12Q96J65 1359 aa6.58□□□□□ -1.36
SVIP-202ENST00000525670 NCANO14594 1321 aa6.58□□□□□ -1.36
SVIP-202ENST00000525670 KIF13BQ9NQT8 1826 aa6.58□□□□□ -1.36
SVIP-202ENST00000525670 A0A087WZG4 1122 aa6.58□□□□□ -1.36
SVIP-202ENST00000525670 A0A0G2JLW4 131 aa6.58□□□□□ -1.36
SVIP-202ENST00000525670 NUDT19A8MXV4 375 aa6.58□□□□□ -1.36
SVIP-202ENST00000525670 B8ZZF3 427 aa6.58□□□□□ -1.36
SVIP-202ENST00000525670 FGF10O15520 208 aaPredicted RBP6.58□□□□□ -1.36
SVIP-202ENST00000525670 ZNF853P0CG23 659 aa6.58□□□□□ -1.36
SVIP-202ENST00000525670 VAMP1P23763 118 aa6.58□□□□□ -1.36
SVIP-202ENST00000525670 AFF3P51826 1226 aaKnown RBP6.58□□□□□ -1.36
SVIP-202ENST00000525670 MFAP1P55081 439 aaKnown RBP6.58□□□□□ -1.36
SVIP-202ENST00000525670 NR1I3Q14994 352 aa6.58□□□□□ -1.36
SVIP-202ENST00000525670 TCEAL1Q15170 157 aa6.58□□□□□ -1.36
SVIP-202ENST00000525670 GPR162Q16538 588 aa6.58□□□□□ -1.36
SVIP-202ENST00000525670 TWISTNBQ3B726 338 aaPredicted RBP6.58□□□□□ -1.36
SVIP-202ENST00000525670 CYP2R1Q6VVX0 501 aa6.58□□□□□ -1.36
SVIP-202ENST00000525670 COPS6Q7L5N1 327 aa6.58□□□□□ -1.36
SVIP-202ENST00000525670 LSRQ86X29 649 aaPredicted RBP6.58□□□□□ -1.36
SVIP-202ENST00000525670 IGDCC3Q8IVU1 814 aa6.58□□□□□ -1.36
SVIP-202ENST00000525670 FIBCD1Q8N539 461 aa6.58□□□□□ -1.36
SVIP-202ENST00000525670 SPATA32Q96LK8 384 aa6.58□□□□□ -1.36
SVIP-202ENST00000525670 FCRL3Q96P31 734 aaPredicted RBP6.58□□□□□ -1.36
SVIP-202ENST00000525670 CRBNQ96SW2 442 aa6.58□□□□□ -1.36
SVIP-202ENST00000525670 PHAXQ9H814 394 aaKnown RBP6.58□□□□□ -1.36
SVIP-202ENST00000525670 NRXN2Q9P2S2 1712 aa6.58□□□□□ -1.36
SVIP-202ENST00000525670 MAP3K15Q6ZN16 1313 aa6.57□□□□□ -1.36
SVIP-202ENST00000525670 UBN2Q6ZU65 1347 aa6.57□□□□□ -1.36
SVIP-202ENST00000525670 SCAMP3O14828 347 aaKnown RBP6.57□□□□□ -1.36
SVIP-202ENST00000525670 TRIM13O60858 407 aa6.57□□□□□ -1.36
SVIP-202ENST00000525670 SERPINB2P05120 415 aa6.57□□□□□ -1.36
SVIP-202ENST00000525670 ITGA4P13612 1032 aa6.57□□□□□ -1.36
SVIP-202ENST00000525670 DPEP1P16444 411 aa6.57□□□□□ -1.36
SVIP-202ENST00000525670 PRR5LQ6MZQ0 368 aa6.57□□□□□ -1.36
SVIP-202ENST00000525670 CNKSR3Q6P9H4 555 aa6.57□□□□□ -1.36
SVIP-202ENST00000525670 RPTNQ6XPR3 784 aa6.57□□□□□ -1.36
SVIP-202ENST00000525670 G2E3Q7L622 706 aa6.57□□□□□ -1.36
SVIP-202ENST00000525670 NBPF5PQ86XG9 351 aaPredicted RBP6.57□□□□□ -1.36
SVIP-202ENST00000525670 TMEFF1Q8IYR6 380 aa6.57□□□□□ -1.36
SVIP-202ENST00000525670 NLGN1Q8N2Q7 840 aa6.57□□□□□ -1.36
SVIP-202ENST00000525670 CNBD1Q8NA66 436 aa6.57□□□□□ -1.36
SVIP-202ENST00000525670 FAM86C1Q9NVL1 165 aa6.57□□□□□ -1.36
SVIP-202ENST00000525670 ZNF652Q9Y2D9 606 aa6.57□□□□□ -1.36
SVIP-202ENST00000525670 DIS3Q9Y2L1 958 aaKnown RBP6.57□□□□□ -1.36
SVIP-202ENST00000525670 PCDHA5Q9Y5H7 936 aa6.57□□□□□ -1.36
SVIP-202ENST00000525670 BRCA1P38398 1863 aaKnown RBP6.57□□□□□ -1.36
SVIP-202ENST00000525670 LAMB2P55268 1798 aa6.57□□□□□ -1.36
SVIP-202ENST00000525670 LTBP3Q9NS15 1303 aa6.56□□□□□ -1.36
SVIP-202ENST00000525670 SPEF2Q9C093 1822 aa6.56□□□□□ -1.36
SVIP-202ENST00000525670 MSL3P1P0C860 447 aa6.56□□□□□ -1.36
SVIP-202ENST00000525670 MAPKAPK2P49137 400 aa6.56□□□□□ -1.36
SVIP-202ENST00000525670 POU4F1Q01851 419 aa6.56□□□□□ -1.36
SVIP-202ENST00000525670 PAK2Q13177 524 aa6.56□□□□□ -1.36
SVIP-202ENST00000525670 PAQR3Q6TCH7 311 aa6.56□□□□□ -1.36
SVIP-202ENST00000525670 LRP10Q7Z4F1 713 aa6.56□□□□□ -1.36
SVIP-202ENST00000525670 FAM129CQ86XR2 697 aa6.56□□□□□ -1.36
SVIP-202ENST00000525670 SYNE4Q8N205 404 aa6.56□□□□□ -1.36
SVIP-202ENST00000525670 RGS22Q8NE09 1264 aa6.56□□□□□ -1.36
SVIP-202ENST00000525670 RELTQ969Z4 430 aa6.56□□□□□ -1.36
SVIP-202ENST00000525670 MYD88Q99836 296 aa6.56□□□□□ -1.36
SVIP-202ENST00000525670 MYH16Q9H6N6 1097 aa6.56□□□□□ -1.36
SVIP-202ENST00000525670 NOL6Q9H6R4 1146 aaKnown RBP6.56□□□□□ -1.36
SVIP-202ENST00000525670 GINM1Q9NU53 330 aa6.56□□□□□ -1.36
SVIP-202ENST00000525670 SLC12A7Q9Y666 1083 aa6.56□□□□□ -1.36
SVIP-202ENST00000525670 DLEC1Q9Y238 1755 aa6.56□□□□□ -1.36
SVIP-202ENST00000525670 TAF1P21675 1872 aa6.56□□□□□ -1.36
SVIP-202ENST00000525670 ZNF521Q96K83 1311 aa6.55□□□□□ -1.36
SVIP-202ENST00000525670 IRS2Q9Y4H2 1338 aa6.55□□□□□ -1.36
SVIP-202ENST00000525670 A0A1W2PQJ5 194 aa6.55□□□□□ -1.36
SVIP-202ENST00000525670 SASH1O94885 1247 aa6.55□□□□□ -1.36
SVIP-202ENST00000525670 TBC1D8O95759 1140 aa6.55□□□□□ -1.36
SVIP-202ENST00000525670 CYBBP04839 570 aa6.55□□□□□ -1.36
SVIP-202ENST00000525670 TM4SF1P30408 202 aa6.55□□□□□ -1.36
SVIP-202ENST00000525670 SOX9P48436 509 aa6.55□□□□□ -1.36
SVIP-202ENST00000525670 EIF6P56537 245 aaKnown RBP6.55□□□□□ -1.36
SVIP-202ENST00000525670 ST5P78524 1137 aa6.55□□□□□ -1.36
SVIP-202ENST00000525670 ZC3H14Q6PJT7 736 aaKnown RBP6.55□□□□□ -1.36
SVIP-202ENST00000525670 C2CD5Q86YS7 1000 aa6.55□□□□□ -1.36
SVIP-202ENST00000525670 WDR63Q8IWG1 891 aa6.55□□□□□ -1.36
SVIP-202ENST00000525670 ZNF622Q969S3 477 aaKnown RBP eCLIP6.55□□□□□ -1.361e-6■■□□□ 14.2
SVIP-202ENST00000525670 PTCHD1Q96NR3 888 aa6.55□□□□□ -1.36
SVIP-202ENST00000525670 STK31Q9BXU1 1019 aa6.55□□□□□ -1.36
SVIP-202ENST00000525670 PDLIM7Q9NR12 457 aa6.55□□□□□ -1.36
SVIP-202ENST00000525670 DDX21Q9NR30 783 aaKnown RBP eCLIP6.55□□□□□ -1.36
SVIP-202ENST00000525670 BABAM1Q9NWV8 329 aa6.55□□□□□ -1.36
SVIP-202ENST00000525670 EFR3BQ9Y2G0 817 aa6.55□□□□□ -1.36
SVIP-202ENST00000525670 DDX60Q8IY21 1712 aaKnown RBP6.55□□□□□ -1.36
SVIP-202ENST00000525670 COL4A1P02462 1669 aa6.55□□□□□ -1.36
SVIP-202ENST00000525670 IL16Q14005 1332 aa6.54□□□□□ -1.36
SVIP-202ENST00000525670 ATP10DQ9P241 1426 aa6.54□□□□□ -1.36
SVIP-202ENST00000525670 SRGAP3O43295 1099 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms