RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 ETV3P41162 512 aa6.41□□□□□ -1.38
USP47-204ENST00000525078 KIF11P52732 1056 aa6.41□□□□□ -1.38
USP47-204ENST00000525078 SLC16A1P53985 500 aa6.41□□□□□ -1.38
USP47-204ENST00000525078 MPP1Q00013 466 aa6.41□□□□□ -1.38
USP47-204ENST00000525078 FKBP15Q5T1M5 1219 aa6.41□□□□□ -1.38
USP47-204ENST00000525078 ARMC3Q5W041 872 aa6.41□□□□□ -1.38
USP47-204ENST00000525078 ZKSCAN2Q63HK3 967 aa6.41□□□□□ -1.38
USP47-204ENST00000525078 TSHZ3Q63HK5 1081 aa6.41□□□□□ -1.38
USP47-204ENST00000525078 IQCEQ6IPM2 695 aa6.41□□□□□ -1.38
USP47-204ENST00000525078 GGT6Q6P531 493 aa6.41□□□□□ -1.38
USP47-204ENST00000525078 EP400NLQ6ZTU2 488 aa6.41□□□□□ -1.38
USP47-204ENST00000525078 WFDC8Q8IUA0 241 aa6.41□□□□□ -1.38
USP47-204ENST00000525078 CCDC103Q8IW40 242 aa6.41□□□□□ -1.38
USP47-204ENST00000525078 THEMISQ8N1K5 641 aaPredicted RBP6.41□□□□□ -1.38
USP47-204ENST00000525078 FAM26EQ8N5C1 309 aa6.41□□□□□ -1.38
USP47-204ENST00000525078 CCDC155Q8N6L0 562 aa6.41□□□□□ -1.38
USP47-204ENST00000525078 ZNF527Q8NB42 609 aa6.41□□□□□ -1.38
USP47-204ENST00000525078 RPGRQ92834 1020 aaKnown RBP6.41□□□□□ -1.38
USP47-204ENST00000525078 ZSCAN31Q96LW9 406 aaPredicted RBP6.41□□□□□ -1.38
USP47-204ENST00000525078 ORAI2Q96SN7 254 aa6.41□□□□□ -1.38
USP47-204ENST00000525078 MCMBPQ9BTE3 642 aa6.41□□□□□ -1.38
USP47-204ENST00000525078 STARD7Q9NQZ5 370 aa6.41□□□□□ -1.38
USP47-204ENST00000525078 ZNF277Q9NRM2 450 aaPredicted RBP6.41□□□□□ -1.38
USP47-204ENST00000525078 CHST7Q9NS84 486 aa6.41□□□□□ -1.38
USP47-204ENST00000525078 BLOC1S4Q9NUP1 217 aa6.41□□□□□ -1.38
USP47-204ENST00000525078 EDARQ9UNE0 448 aa6.41□□□□□ -1.38
USP47-204ENST00000525078 PCDHGB2Q9Y5G2 931 aa6.41□□□□□ -1.38
USP47-204ENST00000525078 AURKAO14965 403 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 ADAMTS3O15072 1205 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 CNOT4O95628 575 aaKnown RBP6.4□□□□□ -1.38
USP47-204ENST00000525078 CD4P01730 458 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 CSTBP04080 98 aaKnown RBP6.4□□□□□ -1.38
USP47-204ENST00000525078 ALDH2P05091 517 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 PDE6AP16499 860 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 ALAS2P22557 587 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 KRT9P35527 623 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 NOP2P46087 812 aaKnown RBP6.4□□□□□ -1.38
USP47-204ENST00000525078 STT3AP46977 705 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 MTNR1BP49286 362 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 CASP5P51878 434 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 PRKG2Q13237 762 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 POLD3Q15054 466 aaPredicted RBP6.4□□□□□ -1.38
USP47-204ENST00000525078 CCDC157Q569K6 752 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 SPECC1Q5M775 1068 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 WDR45BQ5MNZ6 344 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 C1QTNF12Q5T7M4 302 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 AGAP9Q5VTM2 703 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 LETMD1Q6P1Q0 360 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 ANKRD23Q86SG2 305 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 TBC1D1Q86TI0 1168 aaPredicted RBP6.4□□□□□ -1.38
USP47-204ENST00000525078 OSTM1Q86WC4 334 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 SIRT2Q8IXJ6 389 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 SYTL1Q8IYJ3 562 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 SDR16C5Q8N3Y7 309 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 RCBTB1Q8NDN9 531 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 USP13Q92995 863 aaPredicted RBP6.4□□□□□ -1.38
USP47-204ENST00000525078 PHKBQ93100 1093 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 FERMT2Q96AC1 680 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 COA7Q96BR5 231 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 ZBTB10Q96DT7 871 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 SERINC2Q96SA4 455 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 PPP1R16BQ96T49 567 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 CGRRF1Q99675 332 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 ASCC2Q9H1I8 757 aaPredicted RBP6.4□□□□□ -1.38
USP47-204ENST00000525078 ALDH8A1Q9H2A2 487 aaPredicted RBP6.4□□□□□ -1.38
USP47-204ENST00000525078 ALG13Q9NP73 1137 aaKnown RBP6.4□□□□□ -1.38
USP47-204ENST00000525078 TUBD1Q9UJT1 453 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 CEP83Q9Y592 693 aa6.4□□□□□ -1.38
USP47-204ENST00000525078 EIF3FO00303 357 aaPredicted RBP6.39□□□□□ -1.39
USP47-204ENST00000525078 ARNTLO00327 626 aa6.39□□□□□ -1.39
USP47-204ENST00000525078 C2CD2LO14523 706 aa6.39□□□□□ -1.39
USP47-204ENST00000525078 KCNK3O14649 394 aa6.39□□□□□ -1.39
USP47-204ENST00000525078 SIGLEC6O43699 453 aa6.39□□□□□ -1.39
USP47-204ENST00000525078 MYO1BO43795 1136 aa6.39□□□□□ -1.39
USP47-204ENST00000525078 MAFKO60675 156 aa6.39□□□□□ -1.39
USP47-204ENST00000525078 BAIAP3O94812 1187 aa6.39□□□□□ -1.39
USP47-204ENST00000525078 GSNP06396 782 aa6.39□□□□□ -1.39
USP47-204ENST00000525078 DHRS4L1P0CG22 281 aa6.39□□□□□ -1.39
USP47-204ENST00000525078 CEBPAP49715 358 aaPredicted RBP6.39□□□□□ -1.39
USP47-204ENST00000525078 SLC5A3P53794 718 aa6.39□□□□□ -1.39
USP47-204ENST00000525078 LACTBP83111 547 aaPredicted RBP6.39□□□□□ -1.39
USP47-204ENST00000525078 TESK1Q15569 626 aa6.39□□□□□ -1.39
USP47-204ENST00000525078 GRIK5Q16478 980 aa6.39□□□□□ -1.39
USP47-204ENST00000525078 FSCN1Q16658 493 aaKnown RBP6.39□□□□□ -1.39
USP47-204ENST00000525078 UGT8Q16880 541 aa6.39□□□□□ -1.39
USP47-204ENST00000525078 CT83Q5H943 113 aa6.39□□□□□ -1.39
USP47-204ENST00000525078 GET4Q7L5D6 327 aaPredicted RBP6.39□□□□□ -1.39
USP47-204ENST00000525078 DYMQ7RTS9 669 aa6.39□□□□□ -1.39
USP47-204ENST00000525078 TMC3Q7Z5M5 1100 aa6.39□□□□□ -1.39
USP47-204ENST00000525078 ZZZ3Q8IYH5 903 aa6.39□□□□□ -1.39
USP47-204ENST00000525078 PRR18Q8N4B5 295 aa6.39□□□□□ -1.39
USP47-204ENST00000525078 CCDC33Q8N5R6 958 aa6.39□□□□□ -1.39
USP47-204ENST00000525078 LRFN3Q9BTN0 628 aa6.39□□□□□ -1.39
USP47-204ENST00000525078 CENPOQ9BU64 300 aa6.39□□□□□ -1.39
USP47-204ENST00000525078 ITM2CQ9NQX7 267 aa6.39□□□□□ -1.39
USP47-204ENST00000525078 TBC1D22BQ9NU19 505 aa6.39□□□□□ -1.39
USP47-204ENST00000525078 IFT80Q9P2H3 777 aaPredicted RBP6.39□□□□□ -1.39
USP47-204ENST00000525078 PPARGC1AQ9UBK2 798 aaKnown RBP6.39□□□□□ -1.39
USP47-204ENST00000525078 MSRAQ9UJ68 235 aa6.39□□□□□ -1.39
USP47-204ENST00000525078 GJD2Q9UKL4 321 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms