RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 C22orf23Q9BZE7 217 aa21.03■□□□□ 0.96
CAPN1-203ENST00000525013 SAMM50Q9Y512 469 aa21.03■□□□□ 0.96
CAPN1-203ENST00000525013 CDY2AQ9Y6F7 541 aa21.03■□□□□ 0.96
CAPN1-203ENST00000525013 EPOPA6NHQ4 379 aa21.02■□□□□ 0.96
CAPN1-203ENST00000525013 GTPBP6O43824 516 aaPredicted RBP21.02■□□□□ 0.96
CAPN1-203ENST00000525013 HBP1O60381 514 aa21.02■□□□□ 0.96
CAPN1-203ENST00000525013 PFKFB2O60825 505 aa21.02■□□□□ 0.96
CAPN1-203ENST00000525013 RPLP2P05387 115 aaKnown RBP21.02■□□□□ 0.96
CAPN1-203ENST00000525013 AK2P54819 239 aa21.02■□□□□ 0.96
CAPN1-203ENST00000525013 KRT76Q01546 638 aa21.02■□□□□ 0.96
CAPN1-203ENST00000525013 MGAT3Q09327 533 aa21.02■□□□□ 0.96
CAPN1-203ENST00000525013 TMEM62Q0P6H9 643 aa21.02■□□□□ 0.96
CAPN1-203ENST00000525013 MKRN4PQ13434 485 aaPredicted RBP21.02■□□□□ 0.96
CAPN1-203ENST00000525013 ANKRD1Q15327 319 aa21.02■□□□□ 0.96
CAPN1-203ENST00000525013 IER5Q5VY09 327 aa21.02■□□□□ 0.96
CAPN1-203ENST00000525013 TRMT1LQ7Z2T5 733 aaKnown RBP21.02■□□□□ 0.96
CAPN1-203ENST00000525013 SPRED2Q7Z698 418 aa21.02■□□□□ 0.96
CAPN1-203ENST00000525013 ATP8B4Q8TF62 1192 aa21.02■□□□□ 0.96
CAPN1-203ENST00000525013 LENG9Q96B70 501 aa21.02■□□□□ 0.96
CAPN1-203ENST00000525013 MTUS1Q9ULD2 1270 aa21.02■□□□□ 0.96
CAPN1-203ENST00000525013 INSL6Q9Y581 213 aa21.02■□□□□ 0.96
CAPN1-203ENST00000525013 PCDHA2Q9Y5H9 948 aa21.02■□□□□ 0.96
CAPN1-203ENST00000525013 M0QZ92 97 aa21.01■□□□□ 0.95
CAPN1-203ENST00000525013 DTNBO60941 627 aa21.01■□□□□ 0.95
CAPN1-203ENST00000525013 PSAPP07602 524 aa21.01■□□□□ 0.95
CAPN1-203ENST00000525013 LPIN1Q14693 890 aa21.01■□□□□ 0.95
CAPN1-203ENST00000525013 GALNT17Q6IS24 598 aa21.01■□□□□ 0.95
CAPN1-203ENST00000525013 MTHFD1LQ6UB35 978 aa21.01■□□□□ 0.95
CAPN1-203ENST00000525013 SMAP1Q8IYB5 467 aaPredicted RBP21.01■□□□□ 0.95
CAPN1-203ENST00000525013 PRDM6Q9NQX0 595 aa21.01■□□□□ 0.95
CAPN1-203ENST00000525013 KCNJ14Q9UNX9 436 aa21.01■□□□□ 0.95
CAPN1-203ENST00000525013 PCDHA10Q9Y5I2 948 aa21.01■□□□□ 0.95
CAPN1-203ENST00000525013 LINC01553A4QN01 128 aa21■□□□□ 0.95
CAPN1-203ENST00000525013 MSH4O15457 936 aa21■□□□□ 0.95
CAPN1-203ENST00000525013 EDIL3O43854 480 aa21■□□□□ 0.95
CAPN1-203ENST00000525013 KLRC1P26715 233 aa21■□□□□ 0.95
CAPN1-203ENST00000525013 FBXO47Q5MNV8 452 aa21■□□□□ 0.95
CAPN1-203ENST00000525013 FAM177A1Q8N128 213 aaPredicted RBP21■□□□□ 0.95
CAPN1-203ENST00000525013 DAGLBQ8NCG7 672 aa21■□□□□ 0.95
CAPN1-203ENST00000525013 SMIM35A0A1B0GVV1 85 aa20.99■□□□□ 0.95
CAPN1-203ENST00000525013 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.99■□□□□ 0.95
CAPN1-203ENST00000525013 GAS7O60861 476 aa20.99■□□□□ 0.95
CAPN1-203ENST00000525013 XBP1P17861 261 aa20.99■□□□□ 0.95
CAPN1-203ENST00000525013 ZNF484Q5JVG2 852 aa20.99■□□□□ 0.95
CAPN1-203ENST00000525013 LRCH2Q5VUJ6 765 aa20.99■□□□□ 0.95
CAPN1-203ENST00000525013 TSHZ1Q6ZSZ6 1077 aa20.99■□□□□ 0.95
CAPN1-203ENST00000525013 TOP1MTQ969P6 601 aa20.99■□□□□ 0.95
CAPN1-203ENST00000525013 TGS1Q96RS0 853 aaKnown RBP20.99■□□□□ 0.95
CAPN1-203ENST00000525013 YME1L1Q96TA2 773 aa20.99■□□□□ 0.95
CAPN1-203ENST00000525013 GABBR1Q9UBS5 961 aa20.99■□□□□ 0.95
CAPN1-203ENST00000525013 TRPV2Q9Y5S1 764 aa20.99■□□□□ 0.95
CAPN1-203ENST00000525013 WDR64B1ANS9 1081 aa20.98■□□□□ 0.95
CAPN1-203ENST00000525013 CHMP2AO43633 222 aa20.98■□□□□ 0.95
CAPN1-203ENST00000525013 SEC24BO95487 1268 aa20.98■□□□□ 0.95
CAPN1-203ENST00000525013 ATP4AP20648 1035 aa20.98■□□□□ 0.95
CAPN1-203ENST00000525013 NEK4P51957 841 aa20.98■□□□□ 0.95
CAPN1-203ENST00000525013 NONOQ15233 471 aaKnown RBP eCLIP20.98■□□□□ 0.95
CAPN1-203ENST00000525013 NPY5RQ15761 445 aa20.98■□□□□ 0.95
CAPN1-203ENST00000525013 KRT40Q6A162 431 aa20.98■□□□□ 0.95
CAPN1-203ENST00000525013 KRT25Q7Z3Z0 450 aa20.98■□□□□ 0.95
CAPN1-203ENST00000525013 NECAB1Q8N987 351 aa20.98■□□□□ 0.95
CAPN1-203ENST00000525013 SLC5A5Q92911 643 aa20.98■□□□□ 0.95
CAPN1-203ENST00000525013 GJA10Q969M2 543 aa20.98■□□□□ 0.95
CAPN1-203ENST00000525013 RIT2Q99578 217 aa20.98■□□□□ 0.95
CAPN1-203ENST00000525013 DISC1Q9NRI5 854 aa20.98■□□□□ 0.95
CAPN1-203ENST00000525013 ORC3Q9UBD5 711 aaPredicted RBP20.98■□□□□ 0.95
CAPN1-203ENST00000525013 MAFBQ9Y5Q3 323 aaPredicted RBP20.98■□□□□ 0.95
CAPN1-203ENST00000525013 MTCH2Q9Y6C9 303 aa20.98■□□□□ 0.95
CAPN1-203ENST00000525013 STK36Q9NRP7 1315 aa20.98■□□□□ 0.95
CAPN1-203ENST00000525013 TTC28Q96AY4 2481 aa20.98■□□□□ 0.95
CAPN1-203ENST00000525013 COL1A2P08123 1366 aa20.97■□□□□ 0.95
CAPN1-203ENST00000525013 REV3LO60673 3130 aa20.97■□□□□ 0.95
CAPN1-203ENST00000525013 CCDC194A0A1B0GVG4 234 aa20.97■□□□□ 0.95
CAPN1-203ENST00000525013 M0R2N6 131 aa20.97■□□□□ 0.95
CAPN1-203ENST00000525013 TDP2O95551 362 aa20.97■□□□□ 0.95
CAPN1-203ENST00000525013 CD52P31358 61 aa20.97■□□□□ 0.95
CAPN1-203ENST00000525013 ERVK-21P61565 698 aa20.97■□□□□ 0.95
CAPN1-203ENST00000525013 HTRA4P83105 476 aaPredicted RBP20.97■□□□□ 0.95
CAPN1-203ENST00000525013 GRB10Q13322 594 aa20.97■□□□□ 0.95
CAPN1-203ENST00000525013 SKIV2LQ15477 1246 aaKnown RBP20.97■□□□□ 0.95
CAPN1-203ENST00000525013 INF2Q27J81 1249 aa20.97■□□□□ 0.95
CAPN1-203ENST00000525013 NME8Q8N427 588 aa20.97■□□□□ 0.95
CAPN1-203ENST00000525013 GDPD5Q8WTR4 605 aa20.97■□□□□ 0.95
CAPN1-203ENST00000525013 BBXQ8WY36 941 aaPredicted RBP20.97■□□□□ 0.95
CAPN1-203ENST00000525013 TEKT3Q9BXF9 490 aa20.97■□□□□ 0.95
CAPN1-203ENST00000525013 COL25A1Q9BXS0 654 aaPredicted RBP20.97■□□□□ 0.95
CAPN1-203ENST00000525013 CELF4Q9BZC1 486 aaKnown RBP20.97■□□□□ 0.95
CAPN1-203ENST00000525013 TSPYL2Q9H2G4 693 aaPredicted RBP20.97■□□□□ 0.95
CAPN1-203ENST00000525013 AGO3Q9H9G7 860 aaKnown RBP20.97■□□□□ 0.95
CAPN1-203ENST00000525013 GINS2Q9Y248 185 aa20.97■□□□□ 0.95
CAPN1-203ENST00000525013 TTC3P53804 2025 aa20.97■□□□□ 0.95
CAPN1-203ENST00000525013 COL4A4P53420 1690 aaPredicted RBP20.96■□□□□ 0.95
CAPN1-203ENST00000525013 CYP3A7-CYP3A51PA0A087WV96 503 aa20.96■□□□□ 0.95
CAPN1-203ENST00000525013 CTDNEP1O95476 244 aa20.96■□□□□ 0.95
CAPN1-203ENST00000525013 POU3F3P20264 500 aaPredicted RBP20.96■□□□□ 0.95
CAPN1-203ENST00000525013 CYP3A7P24462 503 aa20.96■□□□□ 0.95
CAPN1-203ENST00000525013 Q4G0T1 1027 aa20.96■□□□□ 0.95
CAPN1-203ENST00000525013 METTL13Q8N6R0 699 aa20.96■□□□□ 0.95
CAPN1-203ENST00000525013 IL17RAQ96F46 866 aa20.96■□□□□ 0.95
CAPN1-203ENST00000525013 PHF20Q9BVI0 1012 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms