RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 PLPPR2Q96GM1 343 aa8.87□□□□□ -0.99
NEDD8-203ENST00000524927 PCMTD2Q9NV79 361 aa8.87□□□□□ -0.99
NEDD8-203ENST00000524927 ZNF112Q9UJU3 913 aa8.87□□□□□ -0.99
NEDD8-203ENST00000524927 RALYQ9UKM9 306 aaKnown RBP8.87□□□□□ -0.99
NEDD8-203ENST00000524927 MINPP1Q9UNW1 487 aa8.87□□□□□ -0.99
NEDD8-203ENST00000524927 PCDHB14Q9Y5E9 798 aa8.87□□□□□ -0.99
NEDD8-203ENST00000524927 TECTAO75443 2155 aa8.87□□□□□ -0.99
NEDD8-203ENST00000524927 DLGAP3O95886 979 aa8.86□□□□□ -0.99
NEDD8-203ENST00000524927 ETFBP38117 255 aa8.86□□□□□ -0.99
NEDD8-203ENST00000524927 NBL1P41271 181 aa8.86□□□□□ -0.99
NEDD8-203ENST00000524927 CLCQ05315 142 aa8.86□□□□□ -0.99
NEDD8-203ENST00000524927 PUM1Q14671 1186 aaKnown RBP eCLIP8.86□□□□□ -0.99
NEDD8-203ENST00000524927 GJC2Q5T442 439 aaPredicted RBP8.86□□□□□ -0.99
NEDD8-203ENST00000524927 PSRC1Q6PGN9 363 aaPredicted RBP8.86□□□□□ -0.99
NEDD8-203ENST00000524927 LRFN4Q6PJG9 635 aa8.86□□□□□ -0.99
NEDD8-203ENST00000524927 GADL1Q6ZQY3 521 aa8.86□□□□□ -0.99
NEDD8-203ENST00000524927 REXO1Q8N1G1 1221 aaKnown RBP8.86□□□□□ -0.99
NEDD8-203ENST00000524927 TMEM130Q8N3G9 435 aa8.86□□□□□ -0.99
NEDD8-203ENST00000524927 UBL7Q96S82 380 aaPredicted RBP8.86□□□□□ -0.99
NEDD8-203ENST00000524927 THUMPD2Q9BTF0 503 aaKnown RBP8.86□□□□□ -0.99
NEDD8-203ENST00000524927 FSD1Q9BTV5 496 aa8.86□□□□□ -0.99
NEDD8-203ENST00000524927 RUSC1Q9BVN2 902 aa8.86□□□□□ -0.99
NEDD8-203ENST00000524927 CD209Q9NNX6 404 aa8.86□□□□□ -0.99
NEDD8-203ENST00000524927 DMXL1Q9Y485 3027 aa8.86□□□□□ -0.99
NEDD8-203ENST00000524927 UTYO14607 1347 aa8.85□□□□□ -0.99
NEDD8-203ENST00000524927 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.85□□□□□ -0.99
NEDD8-203ENST00000524927 ADAMTS4O75173 837 aa8.85□□□□□ -0.99
NEDD8-203ENST00000524927 IL9P15248 144 aa8.85□□□□□ -0.99
NEDD8-203ENST00000524927 RGS2P41220 211 aa8.85□□□□□ -0.99
NEDD8-203ENST00000524927 CD97P48960 835 aa8.85□□□□□ -0.99
NEDD8-203ENST00000524927 EIF4A1P60842 406 aaKnown RBP8.85□□□□□ -0.99
NEDD8-203ENST00000524927 PROSER3Q2NL68 480 aa8.85□□□□□ -0.99
NEDD8-203ENST00000524927 HERC4Q5GLZ8 1057 aaPredicted RBP8.85□□□□□ -0.99
NEDD8-203ENST00000524927 MFSD5Q6N075 450 aa8.85□□□□□ -0.99
NEDD8-203ENST00000524927 ACAD11Q709F0 780 aa8.85□□□□□ -0.99
NEDD8-203ENST00000524927 MCM10Q7L590 875 aa8.85□□□□□ -0.99
NEDD8-203ENST00000524927 FAM83AQ86UY5 434 aa8.85□□□□□ -0.99
NEDD8-203ENST00000524927 SLC44A5Q8NCS7 719 aa8.85□□□□□ -0.99
NEDD8-203ENST00000524927 PNISRQ8TF01 805 aaKnown RBP8.85□□□□□ -0.99
NEDD8-203ENST00000524927 USP6NLQ92738 828 aa8.85□□□□□ -0.99
NEDD8-203ENST00000524927 ISCA1Q9BUE6 129 aa8.85□□□□□ -0.99
NEDD8-203ENST00000524927 WDR18Q9BV38 432 aa8.85□□□□□ -0.99
NEDD8-203ENST00000524927 LNPKQ9C0E8 428 aa8.85□□□□□ -0.99
NEDD8-203ENST00000524927 MTIF3Q9H2K0 278 aaKnown RBP8.85□□□□□ -0.99
NEDD8-203ENST00000524927 UBE2ZQ9H832 354 aaPredicted RBP8.85□□□□□ -0.99
NEDD8-203ENST00000524927 PICK1Q9NRD5 415 aa8.85□□□□□ -0.99
NEDD8-203ENST00000524927 PRKAG3Q9UGI9 489 aa8.85□□□□□ -0.99
NEDD8-203ENST00000524927 AGTPBP1Q9UPW5 1226 aa8.85□□□□□ -0.99
NEDD8-203ENST00000524927 POLR3KQ9Y2Y1 108 aaPredicted RBP8.85□□□□□ -0.99
NEDD8-203ENST00000524927 R3HCC1Q9Y3T6 440 aaKnown RBP8.85□□□□□ -0.99
NEDD8-203ENST00000524927 DMDP11532 3685 aa8.84□□□□□ -0.99
NEDD8-203ENST00000524927 PRAMEF27A3QJZ7 478 aa8.84□□□□□ -0.99
NEDD8-203ENST00000524927 GFRA2O00451 464 aa8.84□□□□□ -0.99
NEDD8-203ENST00000524927 HTATSF1O43719 755 aaKnown RBP8.84□□□□□ -0.99
NEDD8-203ENST00000524927 TIMP1P01033 207 aa8.84□□□□□ -0.99
NEDD8-203ENST00000524927 IMPDH2P12268 514 aa8.84□□□□□ -0.99
NEDD8-203ENST00000524927 C12orf40Q86WS4 652 aa8.84□□□□□ -0.99
NEDD8-203ENST00000524927 ADSSL1Q8N142 457 aa8.84□□□□□ -0.99
NEDD8-203ENST00000524927 TDRD7Q8NHU6 1098 aaKnown RBP8.84□□□□□ -0.99
NEDD8-203ENST00000524927 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.84□□□□□ -0.99
NEDD8-203ENST00000524927 APBA2Q99767 749 aa8.84□□□□□ -0.99
NEDD8-203ENST00000524927 PCDHA11Q9Y5I1 949 aa8.84□□□□□ -0.99
NEDD8-203ENST00000524927 RFXAPO00287 272 aa8.83□□□□□ -1
NEDD8-203ENST00000524927 ADCYAP1R1P41586 468 aa8.83□□□□□ -1
NEDD8-203ENST00000524927 CCL14Q16627 93 aa8.83□□□□□ -1
NEDD8-203ENST00000524927 FKBP1CQ5VVH2 108 aa8.83□□□□□ -1
NEDD8-203ENST00000524927 MFSD14CQ5VZR4 134 aa8.83□□□□□ -1
NEDD8-203ENST00000524927 KRT40Q6A162 431 aa8.83□□□□□ -1
NEDD8-203ENST00000524927 Q6ZS46 218 aa8.83□□□□□ -1
NEDD8-203ENST00000524927 ANKS3Q6ZW76 656 aa8.83□□□□□ -1
NEDD8-203ENST00000524927 ZNF365Q70YC5 407 aa8.83□□□□□ -1
NEDD8-203ENST00000524927 MIGA2Q7L4E1 593 aa8.83□□□□□ -1
NEDD8-203ENST00000524927 FBXL6Q8N531 539 aa8.83□□□□□ -1
NEDD8-203ENST00000524927 EDAQ92838 391 aa8.83□□□□□ -1
NEDD8-203ENST00000524927 TOX2Q96NM4 488 aa8.83□□□□□ -1
NEDD8-203ENST00000524927 CDC5LQ99459 802 aaKnown RBP8.83□□□□□ -1
NEDD8-203ENST00000524927 MIS18AQ9NYP9 233 aa8.83□□□□□ -1
NEDD8-203ENST00000524927 MORF4L1Q9UBU8 362 aa8.83□□□□□ -1
NEDD8-203ENST00000524927 JAG2Q9Y219 1238 aa8.83□□□□□ -1
NEDD8-203ENST00000524927 ZHX2Q9Y6X8 837 aa8.83□□□□□ -1
NEDD8-203ENST00000524927 NAV2Q8IVL1 2488 aa8.83□□□□□ -1
NEDD8-203ENST00000524927 WDR87Q6ZQQ6 2873 aa8.83□□□□□ -1
NEDD8-203ENST00000524927 KMT2EQ8IZD2 1858 aa8.83□□□□□ -1
NEDD8-203ENST00000524927 TMEM221A6NGB7 291 aa8.82□□□□□ -1
NEDD8-203ENST00000524927 M0R296 226 aa8.82□□□□□ -1
NEDD8-203ENST00000524927 WISP1O95388 367 aa8.82□□□□□ -1
NEDD8-203ENST00000524927 TGFB1P01137 390 aa8.82□□□□□ -1
NEDD8-203ENST00000524927 KLRK1P26718 216 aa8.82□□□□□ -1
NEDD8-203ENST00000524927 CNGA1P29973 690 aa8.82□□□□□ -1
NEDD8-203ENST00000524927 ID3Q02535 119 aa8.82□□□□□ -1
NEDD8-203ENST00000524927 ZP2Q05996 745 aa8.82□□□□□ -1
NEDD8-203ENST00000524927 PDE4BQ07343 736 aa8.82□□□□□ -1
NEDD8-203ENST00000524927 ZC3H12AQ5D1E8 599 aaKnown RBP8.82□□□□□ -1
NEDD8-203ENST00000524927 XAGE3Q8WTP9 111 aa8.82□□□□□ -1
NEDD8-203ENST00000524927 NKD2Q969F2 451 aaPredicted RBP8.82□□□□□ -1
NEDD8-203ENST00000524927 SHDQ96IW2 340 aa8.82□□□□□ -1
NEDD8-203ENST00000524927 PHACTR3Q96KR7 559 aa8.82□□□□□ -1
NEDD8-203ENST00000524927 MRPL18Q9H0U6 180 aaKnown RBP8.82□□□□□ -1
NEDD8-203ENST00000524927 EHMT1Q9H9B1 1298 aa8.82□□□□□ -1
NEDD8-203ENST00000524927 CYP4F12Q9HCS2 524 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms