RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 TMEM60Q9H2L4 133 aa17■□□□□ 0.31
SF3B2-202ENST00000524475 TUBE1Q9UJT0 475 aa17■□□□□ 0.31
SF3B2-202ENST00000524475 COLQQ9Y215 455 aaPredicted RBP17■□□□□ 0.31
SF3B2-202ENST00000524475 LAMA2P24043 3122 aaKnown RBP17■□□□□ 0.31
SF3B2-202ENST00000524475 ZBTB42B2RXF5 422 aa16.99■□□□□ 0.31
SF3B2-202ENST00000524475 EML1O00423 815 aa16.99■□□□□ 0.31
SF3B2-202ENST00000524475 OATP04181 439 aa16.99■□□□□ 0.31
SF3B2-202ENST00000524475 P4HBP07237 508 aaKnown RBP16.99■□□□□ 0.31
SF3B2-202ENST00000524475 OR52Z1P0C646 297 aa16.99■□□□□ 0.31
SF3B2-202ENST00000524475 IQCF3P0C7M6 154 aa16.99■□□□□ 0.31
SF3B2-202ENST00000524475 CKBP12277 381 aa16.99■□□□□ 0.31
SF3B2-202ENST00000524475 SELPP16109 830 aa16.99■□□□□ 0.31
SF3B2-202ENST00000524475 PSMC5P62195 406 aa16.99■□□□□ 0.31
SF3B2-202ENST00000524475 C4orf32Q8N8J7 132 aa16.99■□□□□ 0.31
SF3B2-202ENST00000524475 NEK9Q8TD19 979 aa16.99■□□□□ 0.31
SF3B2-202ENST00000524475 TTC12Q9H892 705 aaPredicted RBP16.99■□□□□ 0.31
SF3B2-202ENST00000524475 IL23AQ9NPF7 189 aa16.99■□□□□ 0.31
SF3B2-202ENST00000524475 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.99■□□□□ 0.31
SF3B2-202ENST00000524475 PCDHA2Q9Y5H9 948 aa16.99■□□□□ 0.31
SF3B2-202ENST00000524475 ATP2B1P20020 1258 aa16.98■□□□□ 0.31
SF3B2-202ENST00000524475 PRPHP41219 470 aa16.98■□□□□ 0.31
SF3B2-202ENST00000524475 QARSP47897 775 aaKnown RBP16.98■□□□□ 0.31
SF3B2-202ENST00000524475 PRKCEQ02156 737 aa16.98■□□□□ 0.31
SF3B2-202ENST00000524475 ZNF174Q15697 407 aa16.98■□□□□ 0.31
SF3B2-202ENST00000524475 UGCGQ16739 394 aa16.98■□□□□ 0.31
SF3B2-202ENST00000524475 XKR3Q5GH77 459 aa16.98■□□□□ 0.31
SF3B2-202ENST00000524475 PSRC1Q6PGN9 363 aaPredicted RBP16.98■□□□□ 0.31
SF3B2-202ENST00000524475 TRAF7Q6Q0C0 670 aa16.98■□□□□ 0.31
SF3B2-202ENST00000524475 LRRC8DQ7L1W4 858 aa16.98■□□□□ 0.31
SF3B2-202ENST00000524475 RPUSD2Q8IZ73 545 aaKnown RBP16.98■□□□□ 0.31
SF3B2-202ENST00000524475 TDHQ8IZJ6 230 aa16.98■□□□□ 0.31
SF3B2-202ENST00000524475 WNT8BQ93098 351 aa16.98■□□□□ 0.31
SF3B2-202ENST00000524475 NRBP2Q9NSY0 501 aa16.98■□□□□ 0.31
SF3B2-202ENST00000524475 PPME1Q9Y570 386 aa16.98■□□□□ 0.31
SF3B2-202ENST00000524475 SMIM35A0A1B0GVV1 85 aa16.97■□□□□ 0.31
SF3B2-202ENST00000524475 VPS37CA5D8V6 355 aaPredicted RBP16.97■□□□□ 0.31
SF3B2-202ENST00000524475 STBD1O95210 358 aa16.97■□□□□ 0.31
SF3B2-202ENST00000524475 CSF2RAP15509 400 aa16.97■□□□□ 0.31
SF3B2-202ENST00000524475 TXKP42681 527 aa16.97■□□□□ 0.31
SF3B2-202ENST00000524475 FXR2P51116 673 aaKnown RBP eCLIP16.97■□□□□ 0.311e-10■■■□□ 15.4
SF3B2-202ENST00000524475 FAM26DQ5JW98 314 aa16.97■□□□□ 0.31
SF3B2-202ENST00000524475 C4orf19Q8IY42 314 aa16.97■□□□□ 0.31
SF3B2-202ENST00000524475 CKAP2LQ8IYA6 745 aa16.97■□□□□ 0.31
SF3B2-202ENST00000524475 NIFKQ9BYG3 293 aaKnown RBP16.97■□□□□ 0.31
SF3B2-202ENST00000524475 PCDHB6Q9Y5E3 794 aa16.97■□□□□ 0.31
SF3B2-202ENST00000524475 SCN5AQ14524 2016 aa16.97■□□□□ 0.31
SF3B2-202ENST00000524475 MAGEB2O15479 319 aa16.96■□□□□ 0.31
SF3B2-202ENST00000524475 STX6O43752 255 aa16.96■□□□□ 0.31
SF3B2-202ENST00000524475 LYPLA2O95372 231 aa16.96■□□□□ 0.31
SF3B2-202ENST00000524475 BMP15O95972 392 aa16.96■□□□□ 0.31
SF3B2-202ENST00000524475 CXCL10P02778 98 aa16.96■□□□□ 0.31
SF3B2-202ENST00000524475 EPHB4P54760 987 aa16.96■□□□□ 0.31
SF3B2-202ENST00000524475 CCL23P55773 120 aa16.96■□□□□ 0.31
SF3B2-202ENST00000524475 PTGDRQ13258 359 aa16.96■□□□□ 0.31
SF3B2-202ENST00000524475 NBR1Q14596 966 aa16.96■□□□□ 0.31
SF3B2-202ENST00000524475 TARBP2Q15633 366 aaKnown RBP16.96■□□□□ 0.31
SF3B2-202ENST00000524475 NCAPH2Q6IBW4 605 aa16.96■□□□□ 0.31
SF3B2-202ENST00000524475 MTHFD1LQ6UB35 978 aa16.96■□□□□ 0.31
SF3B2-202ENST00000524475 RSPH3Q86UC2 560 aa16.96■□□□□ 0.31
SF3B2-202ENST00000524475 NME8Q8N427 588 aa16.96■□□□□ 0.31
SF3B2-202ENST00000524475 VWCEQ96DN2 955 aa16.96■□□□□ 0.31
SF3B2-202ENST00000524475 HSD17B14Q9BPX1 270 aa16.96■□□□□ 0.31
SF3B2-202ENST00000524475 ZSWIM4Q9H7M6 989 aa16.96■□□□□ 0.31
SF3B2-202ENST00000524475 MTMR6Q9Y217 621 aa16.96■□□□□ 0.31
SF3B2-202ENST00000524475 C22orf31O95567 290 aa16.95■□□□□ 0.3
SF3B2-202ENST00000524475 HSP90AA1P07900 732 aaKnown RBP16.95■□□□□ 0.3
SF3B2-202ENST00000524475 MUTP22033 750 aa16.95■□□□□ 0.3
SF3B2-202ENST00000524475 THPOP40225 353 aa16.95■□□□□ 0.3
SF3B2-202ENST00000524475 IGBP1P78318 339 aa16.95■□□□□ 0.3
SF3B2-202ENST00000524475 ATP2C1P98194 919 aaPredicted RBP16.95■□□□□ 0.3
SF3B2-202ENST00000524475 RESTQ13127 1097 aa16.95■□□□□ 0.3
SF3B2-202ENST00000524475 PDIA5Q14554 519 aa16.95■□□□□ 0.3
SF3B2-202ENST00000524475 TMEM266Q2M3C6 531 aa16.95■□□□□ 0.3
SF3B2-202ENST00000524475 TMEM240Q5SV17 173 aa16.95■□□□□ 0.3
SF3B2-202ENST00000524475 ZNF618Q5T7W0 954 aa16.95■□□□□ 0.3
SF3B2-202ENST00000524475 ARL6IP4Q66PJ3 421 aaKnown RBP16.95■□□□□ 0.3
SF3B2-202ENST00000524475 RUFY4Q6ZNE9 571 aa16.95■□□□□ 0.3
SF3B2-202ENST00000524475 C16orf59Q7L2K0 433 aa16.95■□□□□ 0.3
SF3B2-202ENST00000524475 ZNF710Q8N1W2 664 aa16.95■□□□□ 0.3
SF3B2-202ENST00000524475 TET1Q8NFU7 2136 aa16.95■□□□□ 0.3
SF3B2-202ENST00000524475 SCLYQ96I15 445 aa16.95■□□□□ 0.3
SF3B2-202ENST00000524475 EIF2AK1Q9BQI3 630 aaKnown RBP16.95■□□□□ 0.3
SF3B2-202ENST00000524475 LXNQ9BS40 222 aa16.95■□□□□ 0.3
SF3B2-202ENST00000524475 ZSCAN16Q9H4T2 348 aaPredicted RBP16.95■□□□□ 0.3
SF3B2-202ENST00000524475 PCDH10Q9P2E7 1040 aa16.95■□□□□ 0.3
SF3B2-202ENST00000524475 STK24Q9Y6E0 443 aa16.95■□□□□ 0.3
SF3B2-202ENST00000524475 EVPLQ92817 2033 aa16.94■□□□□ 0.3
SF3B2-202ENST00000524475 RSPH10B2B2RC85 870 aa16.94■□□□□ 0.3
SF3B2-202ENST00000524475 SLITRK3O94933 977 aa16.94■□□□□ 0.3
SF3B2-202ENST00000524475 RSPH10BP0C881 870 aa16.94■□□□□ 0.3
SF3B2-202ENST00000524475 KLRC1P26715 233 aa16.94■□□□□ 0.3
SF3B2-202ENST00000524475 MGAT3Q09327 533 aa16.94■□□□□ 0.3
SF3B2-202ENST00000524475 GPNMBQ14956 572 aa16.94■□□□□ 0.3
SF3B2-202ENST00000524475 LRIT3Q3SXY7 679 aa16.94■□□□□ 0.3
SF3B2-202ENST00000524475 RASIP1Q5U651 963 aa16.94■□□□□ 0.3
SF3B2-202ENST00000524475 FAM43BQ6ZT52 329 aaPredicted RBP16.94■□□□□ 0.3
SF3B2-202ENST00000524475 LINC01465Q8N7H1 131 aa16.94■□□□□ 0.3
SF3B2-202ENST00000524475 IGSF22Q8N9C0 903 aa16.94■□□□□ 0.3
SF3B2-202ENST00000524475 BANK1Q8NDB2 785 aa16.94■□□□□ 0.3
SF3B2-202ENST00000524475 TRAPPC12Q8WVT3 735 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms