RNA–Protein interactions for RNA: ENST00000524292.5

CTNNA1-242, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-242ENST00000524292 SEPT1Q8WYJ6 367 aa9.72□□□□□ -0.85
CTNNA1-242ENST00000524292 SEPT8Q92599 483 aa9.72□□□□□ -0.85
CTNNA1-242ENST00000524292 GLG1Q92896 1179 aa9.72□□□□□ -0.85
CTNNA1-242ENST00000524292 CCDC136Q96JN2 1154 aa9.72□□□□□ -0.85
CTNNA1-242ENST00000524292 TCEANC2Q96MN5 208 aa9.72□□□□□ -0.85
CTNNA1-242ENST00000524292 RNPEPQ9H4A4 650 aa9.72□□□□□ -0.85
CTNNA1-242ENST00000524292 BCAS3Q9H6U6 928 aa9.72□□□□□ -0.85
CTNNA1-242ENST00000524292 CERS4Q9HA82 394 aa9.72□□□□□ -0.85
CTNNA1-242ENST00000524292 RIC8AQ9NPQ8 531 aa9.72□□□□□ -0.85
CTNNA1-242ENST00000524292 SETD4Q9NVD3 440 aa9.72□□□□□ -0.85
CTNNA1-242ENST00000524292 ERAP1Q9NZ08 941 aa9.72□□□□□ -0.85
CTNNA1-242ENST00000524292 PCDHA6Q9UN73 950 aa9.72□□□□□ -0.85
CTNNA1-242ENST00000524292 PCDHB3Q9Y5E6 796 aa9.72□□□□□ -0.85
CTNNA1-242ENST00000524292 PCDHA8Q9Y5H6 950 aa9.72□□□□□ -0.85
CTNNA1-242ENST00000524292 UBIAD1Q9Y5Z9 338 aa9.72□□□□□ -0.85
CTNNA1-242ENST00000524292 NRCAMQ92823 1304 aa9.72□□□□□ -0.85
CTNNA1-242ENST00000524292 POU3F3P20264 500 aaPredicted RBP9.71□□□□□ -0.86
CTNNA1-242ENST00000524292 EXOSC10Q01780 885 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-242ENST00000524292 PPFIA1Q13136 1202 aa9.71□□□□□ -0.86
CTNNA1-242ENST00000524292 MBTPS1Q14703 1052 aa9.71□□□□□ -0.86
CTNNA1-242ENST00000524292 AAK1Q2M2I8 961 aa9.71□□□□□ -0.86
CTNNA1-242ENST00000524292 TAF2Q6P1X5 1199 aa9.71□□□□□ -0.86
CTNNA1-242ENST00000524292 RSPH3Q86UC2 560 aa9.71□□□□□ -0.86
CTNNA1-242ENST00000524292 MYOCDQ8IZQ8 938 aa9.71□□□□□ -0.86
CTNNA1-242ENST00000524292 LMBR1Q8WVP7 490 aa9.71□□□□□ -0.86
CTNNA1-242ENST00000524292 TNPO1Q92973 898 aaKnown RBP9.71□□□□□ -0.86
CTNNA1-242ENST00000524292 ASB2Q96Q27 587 aa9.71□□□□□ -0.86
CTNNA1-242ENST00000524292 SDF4Q9BRK5 362 aa9.71□□□□□ -0.86
CTNNA1-242ENST00000524292 SMARCAD1Q9H4L7 1026 aa9.71□□□□□ -0.86
CTNNA1-242ENST00000524292 AZI2Q9H6S1 392 aa9.71□□□□□ -0.86
CTNNA1-242ENST00000524292 JPH1Q9HDC5 661 aaPredicted RBP9.71□□□□□ -0.86
CTNNA1-242ENST00000524292 JADE2Q9NQC1 790 aa9.71□□□□□ -0.86
CTNNA1-242ENST00000524292 PRDM6Q9NQX0 595 aa9.71□□□□□ -0.86
CTNNA1-242ENST00000524292 PKD2L1Q9P0L9 805 aa9.71□□□□□ -0.86
CTNNA1-242ENST00000524292 BRPF3Q9ULD4 1205 aa9.71□□□□□ -0.86
CTNNA1-242ENST00000524292 INSL6Q9Y581 213 aa9.71□□□□□ -0.86
CTNNA1-242ENST00000524292 V9GY48 417 aaPredicted RBP9.71□□□□□ -0.86
CTNNA1-242ENST00000524292 LCHNA4D1U4 455 aa9.7□□□□□ -0.86
CTNNA1-242ENST00000524292 EPOPA6NHQ4 379 aa9.7□□□□□ -0.86
CTNNA1-242ENST00000524292 STXBP3O00186 592 aa9.7□□□□□ -0.86
CTNNA1-242ENST00000524292 REC8O95072 547 aa9.7□□□□□ -0.86
CTNNA1-242ENST00000524292 RPLP2P05387 115 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-242ENST00000524292 MARK3P27448 753 aa9.7□□□□□ -0.86
CTNNA1-242ENST00000524292 CLCN1P35523 988 aa9.7□□□□□ -0.86
CTNNA1-242ENST00000524292 METAP2P50579 478 aaKnown RBP eCLIP9.7□□□□□ -0.86
CTNNA1-242ENST00000524292 AP3B2Q13367 1082 aa9.7□□□□□ -0.86
CTNNA1-242ENST00000524292 ADCK5Q3MIX3 580 aa9.7□□□□□ -0.86
CTNNA1-242ENST00000524292 PLEKHG4Q58EX7 1191 aa9.7□□□□□ -0.86
CTNNA1-242ENST00000524292 FAM117BQ6P1L5 589 aa9.7□□□□□ -0.86
CTNNA1-242ENST00000524292 BLOC1S2Q6QNY1 142 aa9.7□□□□□ -0.86
CTNNA1-242ENST00000524292 TMCO2Q7Z6W1 182 aaPredicted RBP9.7□□□□□ -0.86
CTNNA1-242ENST00000524292 DBF4BQ8NFT6 615 aa9.7□□□□□ -0.86
CTNNA1-242ENST00000524292 CCDC12Q8WUD4 166 aaPredicted RBP9.7□□□□□ -0.86
CTNNA1-242ENST00000524292 APBB2Q92870 758 aa9.7□□□□□ -0.86
CTNNA1-242ENST00000524292 JAKMIP1Q96N16 626 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-242ENST00000524292 TGS1Q96RS0 853 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-242ENST00000524292 MXRA8Q9BRK3 442 aa9.7□□□□□ -0.86
CTNNA1-242ENST00000524292 IFIH1Q9BYX4 1025 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-242ENST00000524292 KCNH7Q9NS40 1196 aa9.7□□□□□ -0.86
CTNNA1-242ENST00000524292 BARHL2Q9NY43 387 aa9.7□□□□□ -0.86
CTNNA1-242ENST00000524292 SLC9A2Q9UBY0 812 aa9.7□□□□□ -0.86
CTNNA1-242ENST00000524292 TUBE1Q9UJT0 475 aa9.7□□□□□ -0.86
CTNNA1-242ENST00000524292 MTCH2Q9Y6C9 303 aa9.7□□□□□ -0.86
CTNNA1-242ENST00000524292 PRRC2BQ5JSZ5 2229 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-242ENST00000524292 SMCO2A6NFE2 343 aa9.69□□□□□ -0.86
CTNNA1-242ENST00000524292 RRN3P2A6NIE6 340 aa9.69□□□□□ -0.86
CTNNA1-242ENST00000524292 RFXAPO00287 272 aa9.69□□□□□ -0.86
CTNNA1-242ENST00000524292 ATP9AO75110 1047 aa9.69□□□□□ -0.86
CTNNA1-242ENST00000524292 NFASCO94856 1347 aa9.69□□□□□ -0.86
CTNNA1-242ENST00000524292 ARHGEF15O94989 841 aa9.69□□□□□ -0.86
CTNNA1-242ENST00000524292 ZNF76P36508 570 aa9.69□□□□□ -0.86
CTNNA1-242ENST00000524292 COPS2P61201 443 aa9.69□□□□□ -0.86
CTNNA1-242ENST00000524292 ADAM17P78536 824 aa9.69□□□□□ -0.86
CTNNA1-242ENST00000524292 AKAP17AQ02040 695 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-242ENST00000524292 FUT2Q10981 343 aa9.69□□□□□ -0.86
CTNNA1-242ENST00000524292 GRB10Q13322 594 aa9.69□□□□□ -0.86
CTNNA1-242ENST00000524292 GRIK4Q16099 956 aa9.69□□□□□ -0.86
CTNNA1-242ENST00000524292 TCTN1Q2MV58 587 aa9.69□□□□□ -0.86
CTNNA1-242ENST00000524292 CEP55Q53EZ4 464 aa9.69□□□□□ -0.86
CTNNA1-242ENST00000524292 MCTP2Q6DN12 878 aa9.69□□□□□ -0.86
CTNNA1-242ENST00000524292 RPAINQ86UA6 219 aa9.69□□□□□ -0.86
CTNNA1-242ENST00000524292 YME1L1Q96TA2 773 aa9.69□□□□□ -0.86
CTNNA1-242ENST00000524292 ANO3Q9BYT9 981 aa9.69□□□□□ -0.86
CTNNA1-242ENST00000524292 DOCK5Q9H7D0 1870 aa9.69□□□□□ -0.86
CTNNA1-242ENST00000524292 SPTBN5Q9NRC6 3674 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-242ENST00000524292 LMCD1Q9NZU5 365 aa9.69□□□□□ -0.86
CTNNA1-242ENST00000524292 MTUS1Q9ULD2 1270 aa9.69□□□□□ -0.86
CTNNA1-242ENST00000524292 TELO2Q9Y4R8 837 aa9.69□□□□□ -0.86
CTNNA1-242ENST00000524292 GSTTP1A0A1W2PQM5 241 aa9.68□□□□□ -0.86
CTNNA1-242ENST00000524292 LINC01553A4QN01 128 aa9.68□□□□□ -0.86
CTNNA1-242ENST00000524292 M0QZ92 97 aa9.68□□□□□ -0.86
CTNNA1-242ENST00000524292 TNFRSF10AO00220 468 aa9.68□□□□□ -0.86
CTNNA1-242ENST00000524292 SCG2P13521 617 aa9.68□□□□□ -0.86
CTNNA1-242ENST00000524292 PSMA5P28066 241 aa9.68□□□□□ -0.86
CTNNA1-242ENST00000524292 CDC27P30260 824 aa9.68□□□□□ -0.86
CTNNA1-242ENST00000524292 HSPA4P34932 840 aa9.68□□□□□ -0.86
CTNNA1-242ENST00000524292 SREBF1P36956 1147 aa9.68□□□□□ -0.86
CTNNA1-242ENST00000524292 ERVK-21P61565 698 aa9.68□□□□□ -0.86
CTNNA1-242ENST00000524292 APOBRQ0VD83 1088 aa9.68□□□□□ -0.86
CTNNA1-242ENST00000524292 PFKFB3Q16875 520 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms