RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 KIAA1958Q8N8K9 716 aa7.8□□□□□ -1.16
CPNE3-207ENST00000523588 SMC1BQ8NDV3 1235 aa7.8□□□□□ -1.16
CPNE3-207ENST00000523588 OXSMQ9NWU1 459 aa7.8□□□□□ -1.16
CPNE3-207ENST00000523588 H2AFY2Q9P0M6 372 aaPredicted RBP7.8□□□□□ -1.16
CPNE3-207ENST00000523588 GOLGA6L22H0YM25 854 aa7.79□□□□□ -1.16
CPNE3-207ENST00000523588 CYP7B1O75881 506 aa7.79□□□□□ -1.16
CPNE3-207ENST00000523588 KNG1P01042 644 aa7.79□□□□□ -1.16
CPNE3-207ENST00000523588 STAT3P40763 770 aa7.79□□□□□ -1.16
CPNE3-207ENST00000523588 ZNF761Q86XN6 746 aaPredicted RBP7.79□□□□□ -1.16
CPNE3-207ENST00000523588 ADAMTS17Q8TE56 1095 aa7.79□□□□□ -1.16
CPNE3-207ENST00000523588 CHTF18Q8WVB6 975 aa7.79□□□□□ -1.16
CPNE3-207ENST00000523588 LEO1Q8WVC0 666 aaPredicted RBP7.79□□□□□ -1.16
CPNE3-207ENST00000523588 FOXRED1Q96CU9 486 aaPredicted RBP7.79□□□□□ -1.16
CPNE3-207ENST00000523588 KCNC2Q96PR1 638 aa7.79□□□□□ -1.16
CPNE3-207ENST00000523588 ELF4Q99607 663 aaPredicted RBP7.79□□□□□ -1.16
CPNE3-207ENST00000523588 TACO1Q9BSH4 297 aaKnown RBP7.79□□□□□ -1.16
CPNE3-207ENST00000523588 LUC7LQ9NQ29 371 aaKnown RBP7.79□□□□□ -1.16
CPNE3-207ENST00000523588 INCENPQ9NQS7 918 aa7.79□□□□□ -1.16
CPNE3-207ENST00000523588 ACSS2Q9NR19 701 aa7.79□□□□□ -1.16
CPNE3-207ENST00000523588 IFT57Q9NWB7 429 aa7.79□□□□□ -1.16
CPNE3-207ENST00000523588 UCKL1Q9NWZ5 548 aa7.79□□□□□ -1.16
CPNE3-207ENST00000523588 GALNT8Q9NY28 637 aa7.79□□□□□ -1.16
CPNE3-207ENST00000523588 ASB1Q9Y576 335 aa7.79□□□□□ -1.16
CPNE3-207ENST00000523588 PRAMEF22A3QJZ6 481 aa7.78□□□□□ -1.16
CPNE3-207ENST00000523588 GAS7O60861 476 aa7.78□□□□□ -1.16
CPNE3-207ENST00000523588 CHGBP05060 677 aa7.78□□□□□ -1.16
CPNE3-207ENST00000523588 BMP7P18075 431 aa7.78□□□□□ -1.16
CPNE3-207ENST00000523588 SLC9A1P19634 815 aa7.78□□□□□ -1.16
CPNE3-207ENST00000523588 FNTBP49356 437 aa7.78□□□□□ -1.16
CPNE3-207ENST00000523588 SCNN1BP51168 640 aa7.78□□□□□ -1.16
CPNE3-207ENST00000523588 ZNF174Q15697 407 aa7.78□□□□□ -1.16
CPNE3-207ENST00000523588 SMAD2Q15796 467 aaKnown RBP7.78□□□□□ -1.16
CPNE3-207ENST00000523588 PRAMEF18Q5VWM3 479 aa7.78□□□□□ -1.16
CPNE3-207ENST00000523588 RTN4RL1Q86UN2 441 aaPredicted RBP7.78□□□□□ -1.16
CPNE3-207ENST00000523588 SYT8Q8NBV8 401 aa7.78□□□□□ -1.16
CPNE3-207ENST00000523588 C16orf92Q96LL3 132 aa7.78□□□□□ -1.16
CPNE3-207ENST00000523588 YTHDC1Q96MU7 727 aaKnown RBP7.78□□□□□ -1.16
CPNE3-207ENST00000523588 THG1LQ9NWX6 298 aaKnown RBP7.78□□□□□ -1.16
CPNE3-207ENST00000523588 SPO11Q9Y5K1 396 aa7.78□□□□□ -1.16
CPNE3-207ENST00000523588 SBNO2Q9Y2G9 1366 aa7.78□□□□□ -1.16
CPNE3-207ENST00000523588 FBXO21O94952 628 aa7.77□□□□□ -1.17
CPNE3-207ENST00000523588 CYP17A1P05093 508 aa7.77□□□□□ -1.17
CPNE3-207ENST00000523588 VIL1P09327 827 aaKnown RBP7.77□□□□□ -1.17
CPNE3-207ENST00000523588 PTX3P26022 381 aaPredicted RBP7.77□□□□□ -1.17
CPNE3-207ENST00000523588 KCNC1P48547 511 aa7.77□□□□□ -1.17
CPNE3-207ENST00000523588 MCTP2Q6DN12 878 aa7.77□□□□□ -1.17
CPNE3-207ENST00000523588 LRSAM1Q6UWE0 723 aa7.77□□□□□ -1.17
CPNE3-207ENST00000523588 UBR7Q8N806 425 aa7.77□□□□□ -1.17
CPNE3-207ENST00000523588 TXNDC5Q8NBS9 432 aaKnown RBP7.77□□□□□ -1.17
CPNE3-207ENST00000523588 OR2W6PQ8NHA6 318 aa7.77□□□□□ -1.17
CPNE3-207ENST00000523588 PCIF1Q9H4Z3 704 aa7.77□□□□□ -1.17
CPNE3-207ENST00000523588 CAAP1Q9H8G2 361 aa7.77□□□□□ -1.17
CPNE3-207ENST00000523588 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.77□□□□□ -1.17
CPNE3-207ENST00000523588 PRKAB1Q9Y478 270 aa7.77□□□□□ -1.17
CPNE3-207ENST00000523588 TGM5O43548 720 aa7.76□□□□□ -1.17
CPNE3-207ENST00000523588 NOBOXO60393 691 aa7.76□□□□□ -1.17
CPNE3-207ENST00000523588 KLHL18O94889 574 aa7.76□□□□□ -1.17
CPNE3-207ENST00000523588 DHCR24Q15392 516 aa7.76□□□□□ -1.17
CPNE3-207ENST00000523588 STILQ15468 1287 aa7.76□□□□□ -1.17
CPNE3-207ENST00000523588 FAM26FQ5R3K3 315 aa7.76□□□□□ -1.17
CPNE3-207ENST00000523588 ESRP1Q6NXG1 681 aaKnown RBP7.76□□□□□ -1.17
CPNE3-207ENST00000523588 TRMT10BQ6PF06 316 aaKnown RBP7.76□□□□□ -1.17
CPNE3-207ENST00000523588 ZNF662Q6ZS27 426 aa7.76□□□□□ -1.17
CPNE3-207ENST00000523588 KRT26Q7Z3Y9 468 aa7.76□□□□□ -1.17
CPNE3-207ENST00000523588 STRA8Q7Z7C7 330 aa7.76□□□□□ -1.17
CPNE3-207ENST00000523588 SP8Q8IXZ3 490 aa7.76□□□□□ -1.17
CPNE3-207ENST00000523588 EFHBQ8N7U6 833 aa7.76□□□□□ -1.17
CPNE3-207ENST00000523588 HIPK4Q8NE63 616 aa7.76□□□□□ -1.17
CPNE3-207ENST00000523588 BTBD2Q9BX70 525 aa7.76□□□□□ -1.17
CPNE3-207ENST00000523588 L2HGDHQ9H9P8 463 aa7.76□□□□□ -1.17
CPNE3-207ENST00000523588 BPIP17213 487 aa7.75□□□□□ -1.17
CPNE3-207ENST00000523588 ADCYAP1R1P41586 468 aa7.75□□□□□ -1.17
CPNE3-207ENST00000523588 ECE1P42892 770 aa7.75□□□□□ -1.17
CPNE3-207ENST00000523588 IL13RA1P78552 427 aa7.75□□□□□ -1.17
CPNE3-207ENST00000523588 NUDT10Q8NFP7 164 aa7.75□□□□□ -1.17
CPNE3-207ENST00000523588 CHAC2Q8WUX2 184 aa7.75□□□□□ -1.17
CPNE3-207ENST00000523588 ERCC4Q92889 916 aaPredicted RBP7.75□□□□□ -1.17
CPNE3-207ENST00000523588 NUDT11Q96G61 164 aa7.75□□□□□ -1.17
CPNE3-207ENST00000523588 GPR101Q96P66 508 aaPredicted RBP7.75□□□□□ -1.17
CPNE3-207ENST00000523588 PARD6AQ9NPB6 346 aa7.75□□□□□ -1.17
CPNE3-207ENST00000523588 SPTLC3Q9NUV7 552 aa7.75□□□□□ -1.17
CPNE3-207ENST00000523588 LSSP48449 732 aa7.74□□□□□ -1.17
CPNE3-207ENST00000523588 KPNA1P52294 538 aaPredicted RBP7.74□□□□□ -1.17
CPNE3-207ENST00000523588 SMAD3P84022 425 aaKnown RBP7.74□□□□□ -1.17
CPNE3-207ENST00000523588 EPHA7Q15375 998 aa7.74□□□□□ -1.17
CPNE3-207ENST00000523588 RGL3Q3MIN7 710 aa7.74□□□□□ -1.17
CPNE3-207ENST00000523588 KANK2Q63ZY3 851 aa7.74□□□□□ -1.17
CPNE3-207ENST00000523588 DDX46Q7L014 1031 aaKnown RBP7.74□□□□□ -1.17
CPNE3-207ENST00000523588 FEZF2Q8TBJ5 459 aa7.74□□□□□ -1.17
CPNE3-207ENST00000523588 MBD6Q96DN6 1003 aa7.74□□□□□ -1.17
CPNE3-207ENST00000523588 XYLT2Q9H1B5 865 aa7.74□□□□□ -1.17
CPNE3-207ENST00000523588 ZMAT4Q9H898 229 aa7.74□□□□□ -1.17
CPNE3-207ENST00000523588 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.74□□□□□ -1.17
CPNE3-207ENST00000523588 ARID1BQ8NFD5 2236 aaPredicted RBP7.74□□□□□ -1.17
CPNE3-207ENST00000523588 C9orf118A6NHY6 69 aa7.73□□□□□ -1.17
CPNE3-207ENST00000523588 H0Y858 1186 aa7.73□□□□□ -1.17
CPNE3-207ENST00000523588 FKBP9O95302 570 aa7.73□□□□□ -1.17
CPNE3-207ENST00000523588 SOX5P35711 763 aa7.73□□□□□ -1.17
CPNE3-207ENST00000523588 ALDH6A1Q02252 535 aaKnown RBP7.73□□□□□ -1.17
CPNE3-207ENST00000523588 SART3Q15020 963 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms