RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 ME3Q16798 604 aa19.52■□□□□ 0.72
CCNC-213ENST00000523541 SWSAP1Q6NVH7 229 aa19.52■□□□□ 0.72
CCNC-213ENST00000523541 PDXDC2PQ6P474 469 aa19.52■□□□□ 0.72
CCNC-213ENST00000523541 RDM1Q8NG50 284 aa19.52■□□□□ 0.72
CCNC-213ENST00000523541 BBXQ8WY36 941 aaPredicted RBP19.52■□□□□ 0.72
CCNC-213ENST00000523541 ARNTL2Q8WYA1 636 aa19.52■□□□□ 0.72
CCNC-213ENST00000523541 SLC5A5Q92911 643 aa19.52■□□□□ 0.72
CCNC-213ENST00000523541 MBOAT7Q96N66 472 aa19.52■□□□□ 0.72
CCNC-213ENST00000523541 RAD9AQ99638 391 aa19.52■□□□□ 0.72
CCNC-213ENST00000523541 ORC3Q9UBD5 711 aaPredicted RBP19.52■□□□□ 0.72
CCNC-213ENST00000523541 A0A0C4DFX4 3053 aa19.51■□□□□ 0.71
CCNC-213ENST00000523541 MSH4O15457 936 aa19.51■□□□□ 0.71
CCNC-213ENST00000523541 GTPBP6O43824 516 aaPredicted RBP19.51■□□□□ 0.71
CCNC-213ENST00000523541 GJB5O95377 273 aa19.51■□□□□ 0.71
CCNC-213ENST00000523541 CTDNEP1O95476 244 aa19.51■□□□□ 0.71
CCNC-213ENST00000523541 CHRNA1P02708 482 aa19.51■□□□□ 0.71
CCNC-213ENST00000523541 AMHP03971 560 aa19.51■□□□□ 0.71
CCNC-213ENST00000523541 MKRN4PQ13434 485 aaPredicted RBP19.51■□□□□ 0.71
CCNC-213ENST00000523541 PPP4R3AQ6IN85 833 aa19.51■□□□□ 0.71
CCNC-213ENST00000523541 CCDC60Q8IWA6 550 aaPredicted RBP19.51■□□□□ 0.71
CCNC-213ENST00000523541 MYOCDQ8IZQ8 938 aa19.51■□□□□ 0.71
CCNC-213ENST00000523541 ZNF710Q8N1W2 664 aa19.51■□□□□ 0.71
CCNC-213ENST00000523541 UIMC1Q96RL1 719 aa19.51■□□□□ 0.71
CCNC-213ENST00000523541 CEP131Q9UPN4 1083 aa19.51■□□□□ 0.71
CCNC-213ENST00000523541 EYSQ5T1H1 3165 aa19.5■□□□□ 0.71
CCNC-213ENST00000523541 CCDC194A0A1B0GVG4 234 aa19.5■□□□□ 0.71
CCNC-213ENST00000523541 GAS7O60861 476 aa19.5■□□□□ 0.71
CCNC-213ENST00000523541 GCFC2P16383 781 aaKnown RBP19.5■□□□□ 0.71
CCNC-213ENST00000523541 JAK3P52333 1124 aa19.5■□□□□ 0.71
CCNC-213ENST00000523541 MGAT3Q09327 533 aa19.5■□□□□ 0.71
CCNC-213ENST00000523541 MTHFD1LQ6UB35 978 aa19.5■□□□□ 0.71
CCNC-213ENST00000523541 RUFY4Q6ZNE9 571 aa19.5■□□□□ 0.71
CCNC-213ENST00000523541 DNAJB3Q8WWF6 145 aa19.5■□□□□ 0.71
CCNC-213ENST00000523541 FAM167AQ96KS9 214 aa19.5■□□□□ 0.71
CCNC-213ENST00000523541 AIFM3Q96NN9 605 aa19.5■□□□□ 0.71
CCNC-213ENST00000523541 TEKT3Q9BXF9 490 aa19.5■□□□□ 0.71
CCNC-213ENST00000523541 BRMS1Q9HCU9 246 aa19.5■□□□□ 0.71
CCNC-213ENST00000523541 LIMCH1Q9UPQ0 1083 aa19.5■□□□□ 0.71
CCNC-213ENST00000523541 KAT6AQ92794 2004 aa19.5■□□□□ 0.71
CCNC-213ENST00000523541 M0QZ92 97 aa19.49■□□□□ 0.71
CCNC-213ENST00000523541 MRPS6P82932 125 aaKnown RBP19.49■□□□□ 0.71
CCNC-213ENST00000523541 TAP1Q03518 808 aa19.49■□□□□ 0.71
CCNC-213ENST00000523541 ADGRE1Q14246 886 aa19.49■□□□□ 0.71
CCNC-213ENST00000523541 SKIV2LQ15477 1246 aaKnown RBP19.49■□□□□ 0.71
CCNC-213ENST00000523541 TCTN1Q2MV58 587 aa19.49■□□□□ 0.71
CCNC-213ENST00000523541 LRCH2Q5VUJ6 765 aa19.49■□□□□ 0.71
CCNC-213ENST00000523541 FAM20AQ96MK3 541 aa19.49■□□□□ 0.71
CCNC-213ENST00000523541 IFIH1Q9BYX4 1025 aaKnown RBP19.49■□□□□ 0.71
CCNC-213ENST00000523541 FAM49AQ9H0Q0 323 aaPredicted RBP19.49■□□□□ 0.71
CCNC-213ENST00000523541 DISC1Q9NRI5 854 aa19.49■□□□□ 0.71
CCNC-213ENST00000523541 NRBP2Q9NSY0 501 aa19.49■□□□□ 0.71
CCNC-213ENST00000523541 MTUS1Q9ULD2 1270 aa19.49■□□□□ 0.71
CCNC-213ENST00000523541 KCNJ14Q9UNX9 436 aa19.49■□□□□ 0.71
CCNC-213ENST00000523541 SAMM50Q9Y512 469 aa19.49■□□□□ 0.71
CCNC-213ENST00000523541 INSL6Q9Y581 213 aa19.49■□□□□ 0.71
CCNC-213ENST00000523541 KDM3AQ9Y4C1 1321 aa19.49■□□□□ 0.71
CCNC-213ENST00000523541 RBAK-RBAKDNI3L0D1 243 aa19.48■□□□□ 0.71
CCNC-213ENST00000523541 RFXAPO00287 272 aa19.48■□□□□ 0.71
CCNC-213ENST00000523541 PSMD10O75832 226 aa19.48■□□□□ 0.71
CCNC-213ENST00000523541 FDPSP14324 419 aaKnown RBP19.48■□□□□ 0.71
CCNC-213ENST00000523541 POU3F3P20264 500 aaPredicted RBP19.48■□□□□ 0.71
CCNC-213ENST00000523541 KLRC1P26715 233 aa19.48■□□□□ 0.71
CCNC-213ENST00000523541 C8orf34Q49A92 452 aa19.48■□□□□ 0.71
CCNC-213ENST00000523541 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.48■□□□□ 0.71
CCNC-213ENST00000523541 NEK8Q86SG6 692 aa19.48■□□□□ 0.71
CCNC-213ENST00000523541 CKAP2LQ8IYA6 745 aa19.48■□□□□ 0.71
CCNC-213ENST00000523541 TOP1MTQ969P6 601 aa19.48■□□□□ 0.71
CCNC-213ENST00000523541 ZSCAN31Q96LW9 406 aaPredicted RBP19.48■□□□□ 0.71
CCNC-213ENST00000523541 TSPYL2Q9H2G4 693 aaPredicted RBP19.48■□□□□ 0.71
CCNC-213ENST00000523541 UNC80Q8N2C7 3258 aa19.48■□□□□ 0.71
CCNC-213ENST00000523541 MYO9BQ13459 2157 aa19.47■□□□□ 0.71
CCNC-213ENST00000523541 LCHNA4D1U4 455 aa19.47■□□□□ 0.71
CCNC-213ENST00000523541 TBX3O15119 743 aa19.47■□□□□ 0.71
CCNC-213ENST00000523541 MAGEB2O15479 319 aa19.47■□□□□ 0.71
CCNC-213ENST00000523541 UPP2O95045 317 aa19.47■□□□□ 0.71
CCNC-213ENST00000523541 ATP4AP20648 1035 aa19.47■□□□□ 0.71
CCNC-213ENST00000523541 FBXO47Q5MNV8 452 aa19.47■□□□□ 0.71
CCNC-213ENST00000523541 TSHZ1Q6ZSZ6 1077 aa19.47■□□□□ 0.71
CCNC-213ENST00000523541 NECAB1Q8N987 351 aa19.47■□□□□ 0.71
CCNC-213ENST00000523541 NSUN7Q8NE18 718 aaKnown RBP19.47■□□□□ 0.71
CCNC-213ENST00000523541 LLPHQ9BRT6 129 aaKnown RBP19.47■□□□□ 0.71
CCNC-213ENST00000523541 FTHL17Q9BXU8 183 aa19.47■□□□□ 0.71
CCNC-213ENST00000523541 CHD7Q9P2D1 2997 aa19.47■□□□□ 0.71
CCNC-213ENST00000523541 GABBR1Q9UBS5 961 aa19.47■□□□□ 0.71
CCNC-213ENST00000523541 DDX25Q9UHL0 483 aaKnown RBP19.47■□□□□ 0.71
CCNC-213ENST00000523541 CDY2AQ9Y6F7 541 aa19.47■□□□□ 0.71
CCNC-213ENST00000523541 GHRP10912 638 aa19.46■□□□□ 0.71
CCNC-213ENST00000523541 KRT2P35908 639 aa19.46■□□□□ 0.71
CCNC-213ENST00000523541 RBM25P49756 843 aaKnown RBP19.46■□□□□ 0.71
CCNC-213ENST00000523541 HTRA4P83105 476 aaPredicted RBP19.46■□□□□ 0.71
CCNC-213ENST00000523541 TRIM29Q14134 588 aa19.46■□□□□ 0.71
CCNC-213ENST00000523541 LPIN1Q14693 890 aa19.46■□□□□ 0.71
CCNC-213ENST00000523541 INF2Q27J81 1249 aa19.46■□□□□ 0.71
CCNC-213ENST00000523541 ODR4Q5SWX8 454 aa19.46■□□□□ 0.71
CCNC-213ENST00000523541 B3GNT9Q6UX72 402 aa19.46■□□□□ 0.71
CCNC-213ENST00000523541 ETNPPLQ8TBG4 499 aa19.46■□□□□ 0.71
CCNC-213ENST00000523541 CELF4Q9BZC1 486 aaKnown RBP19.46■□□□□ 0.71
CCNC-213ENST00000523541 TRPV2Q9Y5S1 764 aa19.46■□□□□ 0.71
CCNC-213ENST00000523541 IGSF9BQ9UPX0 1349 aa19.46■□□□□ 0.71
CCNC-213ENST00000523541 TDP2O95551 362 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms