RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 RUSC1Q9BVN2 902 aa10.41□□□□□ -0.74
SDCBP-212ENST00000523483 MAF1Q9H063 256 aa10.41□□□□□ -0.74
SDCBP-212ENST00000523483 SRRDQ9UH36 339 aa10.41□□□□□ -0.74
SDCBP-212ENST00000523483 KIAA1217Q5T5P2 1943 aa10.41□□□□□ -0.74
SDCBP-212ENST00000523483 BECN2A8MW95 431 aa10.4□□□□□ -0.74
SDCBP-212ENST00000523483 ZNF862O60290 1169 aa10.4□□□□□ -0.74
SDCBP-212ENST00000523483 PGK1P00558 417 aa10.4□□□□□ -0.74
SDCBP-212ENST00000523483 SOX10P56693 466 aa10.4□□□□□ -0.74
SDCBP-212ENST00000523483 HERC4Q5GLZ8 1057 aaPredicted RBP10.4□□□□□ -0.74
SDCBP-212ENST00000523483 CCDC62Q6P9F0 684 aa10.4□□□□□ -0.74
SDCBP-212ENST00000523483 ZNF467Q7Z7K2 595 aaPredicted RBP10.4□□□□□ -0.74
SDCBP-212ENST00000523483 TLK2Q86UE8 772 aa10.4□□□□□ -0.74
SDCBP-212ENST00000523483 SLC39A2Q9NP94 309 aa10.4□□□□□ -0.74
SDCBP-212ENST00000523483 USP25Q9UHP3 1055 aa10.4□□□□□ -0.74
SDCBP-212ENST00000523483 MAN1B1Q9UKM7 699 aa10.4□□□□□ -0.74
SDCBP-212ENST00000523483 SYNGAP1Q96PV0 1343 aa10.4□□□□□ -0.74
SDCBP-212ENST00000523483 DOCK5Q9H7D0 1870 aa10.4□□□□□ -0.74
SDCBP-212ENST00000523483 ZSWIM8A7E2V4 1837 aa10.4□□□□□ -0.74
SDCBP-212ENST00000523483 RSPH10B2B2RC85 870 aa10.4□□□□□ -0.74
SDCBP-212ENST00000523483 HOXC6P09630 235 aa10.4□□□□□ -0.74
SDCBP-212ENST00000523483 RSPH10BP0C881 870 aa10.4□□□□□ -0.74
SDCBP-212ENST00000523483 STX1AQ16623 288 aa10.4□□□□□ -0.74
SDCBP-212ENST00000523483 C11orf57Q6ZUT1 292 aaPredicted RBP10.4□□□□□ -0.74
SDCBP-212ENST00000523483 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.4□□□□□ -0.74
SDCBP-212ENST00000523483 SH3TC2Q8TF17 1288 aa10.4□□□□□ -0.74
SDCBP-212ENST00000523483 AP5M1Q9H0R1 490 aa10.4□□□□□ -0.74
SDCBP-212ENST00000523483 SUGCTQ9HAC7 445 aa10.4□□□□□ -0.74
SDCBP-212ENST00000523483 KBTBD4Q9NVX7 518 aa10.4□□□□□ -0.74
SDCBP-212ENST00000523483 ANO10Q9NW15 660 aa10.4□□□□□ -0.74
SDCBP-212ENST00000523483 GDAQ9Y2T3 454 aa10.4□□□□□ -0.74
SDCBP-212ENST00000523483 MKI67P46013 3256 aaKnown RBP10.4□□□□□ -0.74
SDCBP-212ENST00000523483 NFASCO94856 1347 aa10.4□□□□□ -0.74
SDCBP-212ENST00000523483 GSTTP1A0A1W2PQM5 241 aa10.4□□□□□ -0.75
SDCBP-212ENST00000523483 ZNF165P49910 485 aa10.4□□□□□ -0.75
SDCBP-212ENST00000523483 DPYDQ12882 1025 aa10.4□□□□□ -0.75
SDCBP-212ENST00000523483 LRRC41Q15345 812 aa10.4□□□□□ -0.75
SDCBP-212ENST00000523483 FAM102BQ5T8I3 360 aa10.4□□□□□ -0.75
SDCBP-212ENST00000523483 PADI6Q6TGC4 694 aa10.4□□□□□ -0.75
SDCBP-212ENST00000523483 ABHD15Q6UXT9 468 aa10.4□□□□□ -0.75
SDCBP-212ENST00000523483 TRMT44Q8IYL2 757 aaKnown RBP10.4□□□□□ -0.75
SDCBP-212ENST00000523483 GPR20Q99678 358 aa10.4□□□□□ -0.75
SDCBP-212ENST00000523483 CUEDC2Q9H467 287 aa10.4□□□□□ -0.75
SDCBP-212ENST00000523483 STK24Q9Y6E0 443 aa10.4□□□□□ -0.75
SDCBP-212ENST00000523483 LCTP09848 1927 aa10.4□□□□□ -0.75
SDCBP-212ENST00000523483 FAM13AO94988 1023 aa10.39□□□□□ -0.75
SDCBP-212ENST00000523483 ARHGAP1Q07960 439 aa10.39□□□□□ -0.75
SDCBP-212ENST00000523483 LAMC2Q13753 1193 aa10.39□□□□□ -0.75
SDCBP-212ENST00000523483 KMT5BQ4FZB7 885 aa10.39□□□□□ -0.75
SDCBP-212ENST00000523483 DUSP28Q4G0W2 176 aa10.39□□□□□ -0.75
SDCBP-212ENST00000523483 FAM160B1Q5W0V3 765 aa10.39□□□□□ -0.75
SDCBP-212ENST00000523483 LUZP1Q86V48 1076 aa10.39□□□□□ -0.75
SDCBP-212ENST00000523483 TRAPPC12Q8WVT3 735 aa10.39□□□□□ -0.75
SDCBP-212ENST00000523483 VTI1AQ96AJ9 217 aa10.39□□□□□ -0.75
SDCBP-212ENST00000523483 ZBTB10Q96DT7 871 aa10.39□□□□□ -0.75
SDCBP-212ENST00000523483 ZNF668Q96K58 619 aaPredicted RBP10.39□□□□□ -0.75
SDCBP-212ENST00000523483 REEP2Q9BRK0 252 aa10.39□□□□□ -0.75
SDCBP-212ENST00000523483 GPRC5CQ9NQ84 441 aa10.39□□□□□ -0.75
SDCBP-212ENST00000523483 FAM184BQ9ULE4 1060 aa10.39□□□□□ -0.75
SDCBP-212ENST00000523483 EYA4O95677 639 aa10.39□□□□□ -0.75
SDCBP-212ENST00000523483 MYL3P08590 195 aa10.39□□□□□ -0.75
SDCBP-212ENST00000523483 CYP11B2P19099 503 aa10.39□□□□□ -0.75
SDCBP-212ENST00000523483 MDM2Q00987 491 aaPredicted RBP10.39□□□□□ -0.75
SDCBP-212ENST00000523483 B3GNT9Q6UX72 402 aa10.39□□□□□ -0.75
SDCBP-212ENST00000523483 ANO5Q75V66 913 aa10.39□□□□□ -0.75
SDCBP-212ENST00000523483 OTUD6AQ7L8S5 288 aa10.39□□□□□ -0.75
SDCBP-212ENST00000523483 MYCT1Q8N699 235 aa10.39□□□□□ -0.75
SDCBP-212ENST00000523483 METTL13Q8N6R0 699 aa10.39□□□□□ -0.75
SDCBP-212ENST00000523483 USP6NLQ92738 828 aa10.39□□□□□ -0.75
SDCBP-212ENST00000523483 PPP1R16BQ96T49 567 aa10.39□□□□□ -0.75
SDCBP-212ENST00000523483 PANK4Q9NVE7 773 aa10.39□□□□□ -0.75
SDCBP-212ENST00000523483 CCND3P30281 292 aaPredicted RBP10.39□□□□□ -0.75
SDCBP-212ENST00000523483 POLGP54098 1239 aaPredicted RBP10.39□□□□□ -0.75
SDCBP-212ENST00000523483 ZNF445P59923 1031 aa10.39□□□□□ -0.75
SDCBP-212ENST00000523483 CACNB2Q08289 660 aaPredicted RBP10.39□□□□□ -0.75
SDCBP-212ENST00000523483 ARHGEF6Q15052 776 aa10.39□□□□□ -0.75
SDCBP-212ENST00000523483 GNASQ5JWF2 1037 aa10.39□□□□□ -0.75
SDCBP-212ENST00000523483 NEK9Q8TD19 979 aa10.39□□□□□ -0.75
SDCBP-212ENST00000523483 MORC4Q8TE76 937 aa10.39□□□□□ -0.75
SDCBP-212ENST00000523483 ZNF865P0CJ78 1059 aaPredicted RBP10.38□□□□□ -0.75
SDCBP-212ENST00000523483 AKR1A1P14550 325 aa10.38□□□□□ -0.75
SDCBP-212ENST00000523483 RARRES1P49788 294 aa10.38□□□□□ -0.75
SDCBP-212ENST00000523483 SLC12A3P55017 1021 aa10.38□□□□□ -0.75
SDCBP-212ENST00000523483 IQSEC1Q6DN90 963 aa10.38□□□□□ -0.75
SDCBP-212ENST00000523483 RINT1Q6NUQ1 792 aa10.38□□□□□ -0.75
SDCBP-212ENST00000523483 KATNBL1Q9H079 304 aa10.38□□□□□ -0.75
SDCBP-212ENST00000523483 RBSNQ9H1K0 784 aa10.38□□□□□ -0.75
SDCBP-212ENST00000523483 GINS2Q9Y248 185 aa10.38□□□□□ -0.75
SDCBP-212ENST00000523483 PTCH2Q9Y6C5 1203 aa10.38□□□□□ -0.75
SDCBP-212ENST00000523483 KIAA0100Q14667 2235 aaKnown RBP10.38□□□□□ -0.75
SDCBP-212ENST00000523483 TPD52L1Q16890 204 aaPredicted RBP10.38□□□□□ -0.75
SDCBP-212ENST00000523483 BRDTQ58F21 947 aaPredicted RBP10.38□□□□□ -0.75
SDCBP-212ENST00000523483 SH3RF1Q7Z6J0 888 aa10.38□□□□□ -0.75
SDCBP-212ENST00000523483 NELFCDQ8IXH7 590 aa10.38□□□□□ -0.75
SDCBP-212ENST00000523483 CCDC65Q8IXS2 484 aa10.38□□□□□ -0.75
SDCBP-212ENST00000523483 SYT2Q8N9I0 419 aaPredicted RBP10.38□□□□□ -0.75
SDCBP-212ENST00000523483 NOC3LQ8WTT2 800 aaKnown RBP10.38□□□□□ -0.75
SDCBP-212ENST00000523483 LRRC27Q9C0I9 530 aa10.38□□□□□ -0.75
SDCBP-212ENST00000523483 GOLGA6L19H0YKK7 550 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 RBAK-RBAKDNI3L0D1 243 aa10.37□□□□□ -0.75
SDCBP-212ENST00000523483 DKC1O60832 514 aaKnown RBP eCLIP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms