RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 CATSPEREQ5SY80 951 aa8.33□□□□□ -1.08
CPNE3-206ENST00000523469 TTLL7Q6ZT98 887 aa8.33□□□□□ -1.08
CPNE3-206ENST00000523469 FILIP1Q7Z7B0 1213 aa8.33□□□□□ -1.08
CPNE3-206ENST00000523469 EFHBQ8N7U6 833 aa8.33□□□□□ -1.08
CPNE3-206ENST00000523469 UBR7Q8N806 425 aa8.33□□□□□ -1.08
CPNE3-206ENST00000523469 ZSCAN18Q8TBC5 510 aaPredicted RBP8.33□□□□□ -1.08
CPNE3-206ENST00000523469 CHTF18Q8WVB6 975 aa8.33□□□□□ -1.08
CPNE3-206ENST00000523469 ASB15Q8WXK1 588 aa8.33□□□□□ -1.08
CPNE3-206ENST00000523469 ZSWIM3Q96MP5 696 aa8.33□□□□□ -1.08
CPNE3-206ENST00000523469 GBP4Q96PP9 640 aa8.33□□□□□ -1.08
CPNE3-206ENST00000523469 SLC39A2Q9NP94 309 aa8.33□□□□□ -1.08
CPNE3-206ENST00000523469 ASB1Q9Y576 335 aa8.33□□□□□ -1.08
CPNE3-206ENST00000523469 PDS5BQ9NTI5 1447 aa8.32□□□□□ -1.08
CPNE3-206ENST00000523469 SH3D21A4FU49 640 aa8.32□□□□□ -1.08
CPNE3-206ENST00000523469 RASSF10A6NK89 507 aa8.32□□□□□ -1.08
CPNE3-206ENST00000523469 PTGS1P23219 599 aa8.32□□□□□ -1.08
CPNE3-206ENST00000523469 LINC01356Q8N9X3 169 aa8.32□□□□□ -1.08
CPNE3-206ENST00000523469 SCYL1Q96KG9 808 aa8.32□□□□□ -1.08
CPNE3-206ENST00000523469 KRTAP9-2Q9BYQ4 174 aa8.32□□□□□ -1.08
CPNE3-206ENST00000523469 GOLGA2P5Q9HBQ8 144 aa8.32□□□□□ -1.08
CPNE3-206ENST00000523469 NTMQ9P121 344 aa8.32□□□□□ -1.08
CPNE3-206ENST00000523469 ARHGAP20Q9P2F6 1191 aa8.32□□□□□ -1.08
CPNE3-206ENST00000523469 ARHGEF11O15085 1522 aa8.32□□□□□ -1.08
CPNE3-206ENST00000523469 ATAD2BQ9ULI0 1458 aa8.32□□□□□ -1.08
CPNE3-206ENST00000523469 FFAR3O14843 346 aa8.31□□□□□ -1.08
CPNE3-206ENST00000523469 SLC9A1P19634 815 aa8.31□□□□□ -1.08
CPNE3-206ENST00000523469 RPL13P26373 211 aaKnown RBP8.31□□□□□ -1.08
CPNE3-206ENST00000523469 CNGA1P29973 690 aa8.31□□□□□ -1.08
CPNE3-206ENST00000523469 LSSP48449 732 aa8.31□□□□□ -1.08
CPNE3-206ENST00000523469 KPNA1P52294 538 aaPredicted RBP8.31□□□□□ -1.08
CPNE3-206ENST00000523469 IL2P60568 153 aa8.31□□□□□ -1.08
CPNE3-206ENST00000523469 PRR31Q5SQ13 230 aa8.31□□□□□ -1.08
CPNE3-206ENST00000523469 C1QL4Q86Z23 238 aa8.31□□□□□ -1.08
CPNE3-206ENST00000523469 PASD1Q8IV76 773 aa8.31□□□□□ -1.08
CPNE3-206ENST00000523469 HIPK4Q8NE63 616 aa8.31□□□□□ -1.08
CPNE3-206ENST00000523469 ZNF526Q8TF50 670 aaPredicted RBP8.31□□□□□ -1.08
CPNE3-206ENST00000523469 USP7Q93009 1102 aa8.31□□□□□ -1.08
CPNE3-206ENST00000523469 GPR101Q96P66 508 aaPredicted RBP8.31□□□□□ -1.08
CPNE3-206ENST00000523469 ELF4Q99607 663 aaPredicted RBP8.31□□□□□ -1.08
CPNE3-206ENST00000523469 GALNT8Q9NY28 637 aa8.31□□□□□ -1.08
CPNE3-206ENST00000523469 H2AFY2Q9P0M6 372 aaPredicted RBP8.31□□□□□ -1.08
CPNE3-206ENST00000523469 CROTQ9UKG9 612 aa8.31□□□□□ -1.08
CPNE3-206ENST00000523469 MRC2Q9UBG0 1479 aa8.31□□□□□ -1.08
CPNE3-206ENST00000523469 WDR62O43379 1518 aa8.3□□□□□ -1.08
CPNE3-206ENST00000523469 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.3□□□□□ -1.08
CPNE3-206ENST00000523469 GOLGA6L22H0YM25 854 aa8.3□□□□□ -1.08
CPNE3-206ENST00000523469 FKBP9O95302 570 aa8.3□□□□□ -1.08
CPNE3-206ENST00000523469 BPIP17213 487 aa8.3□□□□□ -1.08
CPNE3-206ENST00000523469 ADCYAP1R1P41586 468 aa8.3□□□□□ -1.08
CPNE3-206ENST00000523469 RTP5Q14D33 572 aa8.3□□□□□ -1.08
CPNE3-206ENST00000523469 FKBP9P1Q75LS8 142 aa8.3□□□□□ -1.08
CPNE3-206ENST00000523469 C11orf74Q86VG3 221 aa8.3□□□□□ -1.08
CPNE3-206ENST00000523469 AFAP1L2Q8N4X5 818 aa8.3□□□□□ -1.08
CPNE3-206ENST00000523469 E2F7Q96AV8 911 aa8.3□□□□□ -1.08
CPNE3-206ENST00000523469 IFT22Q9H7X7 185 aa8.3□□□□□ -1.08
CPNE3-206ENST00000523469 INCENPQ9NQS7 918 aa8.3□□□□□ -1.08
CPNE3-206ENST00000523469 ZFP69BQ9UJL9 534 aa8.3□□□□□ -1.08
CPNE3-206ENST00000523469 ZEB2O60315 1214 aa8.29□□□□□ -1.08
CPNE3-206ENST00000523469 FBXO21O94952 628 aa8.29□□□□□ -1.08
CPNE3-206ENST00000523469 MPIG6BO95866 241 aa8.29□□□□□ -1.08
CPNE3-206ENST00000523469 CHGBP05060 677 aa8.29□□□□□ -1.08
CPNE3-206ENST00000523469 CPEP16870 476 aa8.29□□□□□ -1.08
CPNE3-206ENST00000523469 MC4RP32245 332 aa8.29□□□□□ -1.08
CPNE3-206ENST00000523469 GLRBP48167 497 aa8.29□□□□□ -1.08
CPNE3-206ENST00000523469 STRN3Q13033 797 aa8.29□□□□□ -1.08
CPNE3-206ENST00000523469 STRA8Q7Z7C7 330 aa8.29□□□□□ -1.08
CPNE3-206ENST00000523469 NME9Q86XW9 330 aa8.29□□□□□ -1.08
CPNE3-206ENST00000523469 TTC1Q99614 292 aa8.29□□□□□ -1.08
CPNE3-206ENST00000523469 TOMM22Q9NS69 142 aa8.29□□□□□ -1.08
CPNE3-206ENST00000523469 KCND1Q9NSA2 647 aa8.29□□□□□ -1.08
CPNE3-206ENST00000523469 UCKL1Q9NWZ5 548 aa8.29□□□□□ -1.08
CPNE3-206ENST00000523469 PRAMEF22A3QJZ6 481 aa8.28□□□□□ -1.08
CPNE3-206ENST00000523469 PTX3P26022 381 aaPredicted RBP8.28□□□□□ -1.08
CPNE3-206ENST00000523469 IL13P35225 146 aa8.28□□□□□ -1.08
CPNE3-206ENST00000523469 SARSP49591 514 aaKnown RBP8.28□□□□□ -1.08
CPNE3-206ENST00000523469 EPHA7Q15375 998 aa8.28□□□□□ -1.08
CPNE3-206ENST00000523469 SMAD2Q15796 467 aaKnown RBP8.28□□□□□ -1.08
CPNE3-206ENST00000523469 PHF19Q5T6S3 580 aa8.28□□□□□ -1.08
CPNE3-206ENST00000523469 PRAMEF18Q5VWM3 479 aa8.28□□□□□ -1.08
CPNE3-206ENST00000523469 DPP8Q6V1X1 898 aaPredicted RBP8.28□□□□□ -1.08
CPNE3-206ENST00000523469 RTN4RL1Q86UN2 441 aaPredicted RBP8.28□□□□□ -1.08
CPNE3-206ENST00000523469 ZZZ3Q8IYH5 903 aa8.28□□□□□ -1.08
CPNE3-206ENST00000523469 TP53I13Q8NBR0 393 aaPredicted RBP8.28□□□□□ -1.08
CPNE3-206ENST00000523469 ERCC4Q92889 916 aaPredicted RBP8.28□□□□□ -1.08
CPNE3-206ENST00000523469 FOXRED1Q96CU9 486 aaPredicted RBP8.28□□□□□ -1.08
CPNE3-206ENST00000523469 C16orf92Q96LL3 132 aa8.28□□□□□ -1.08
CPNE3-206ENST00000523469 SPTLC3Q9NUV7 552 aa8.28□□□□□ -1.08
CPNE3-206ENST00000523469 KRTAP9-6A0A140TA67 174 aa8.27□□□□□ -1.09
CPNE3-206ENST00000523469 BRINP1O60477 761 aa8.27□□□□□ -1.09
CPNE3-206ENST00000523469 IL18BPO95998 194 aa8.27□□□□□ -1.09
CPNE3-206ENST00000523469 ZNF28P17035 718 aa8.27□□□□□ -1.09
CPNE3-206ENST00000523469 MLLT6P55198 1093 aaPredicted RBP8.27□□□□□ -1.09
CPNE3-206ENST00000523469 NFKB2Q00653 900 aa8.27□□□□□ -1.09
CPNE3-206ENST00000523469 ADCY1Q08828 1119 aa8.27□□□□□ -1.09
CPNE3-206ENST00000523469 VMACQ2NL98 169 aa8.27□□□□□ -1.09
CPNE3-206ENST00000523469 ADGRG2Q8IZP9 1017 aa8.27□□□□□ -1.09
CPNE3-206ENST00000523469 CARFQ8N187 725 aa8.27□□□□□ -1.09
CPNE3-206ENST00000523469 STPG3Q8N7X2 389 aa8.27□□□□□ -1.09
CPNE3-206ENST00000523469 CALML6Q8TD86 181 aa8.27□□□□□ -1.09
CPNE3-206ENST00000523469 BTBD2Q9BX70 525 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms