RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 PGBD1Q96JS3 809 aa29.67■■■□□ 2.34
PVT1-219ENST00000523427 FTHL17Q9BXU8 183 aa29.67■■■□□ 2.34
PVT1-219ENST00000523427 LRFN2Q9ULH4 789 aa29.67■■■□□ 2.34
PVT1-219ENST00000523427 GINS2Q9Y248 185 aa29.67■■■□□ 2.34
PVT1-219ENST00000523427 STAG3L1P0CL83 205 aa29.66■■■□□ 2.34
PVT1-219ENST00000523427 TMTC2Q8N394 836 aa29.66■■■□□ 2.34
PVT1-219ENST00000523427 CYP2W1Q8TAV3 490 aa29.66■■■□□ 2.34
PVT1-219ENST00000523427 POF1BQ8WVV4 589 aa29.66■■■□□ 2.34
PVT1-219ENST00000523427 KCNH7Q9NS40 1196 aa29.66■■■□□ 2.34
PVT1-219ENST00000523427 PCDHGC5Q9Y5F6 944 aa29.66■■■□□ 2.34
PVT1-219ENST00000523427 SCG2P13521 617 aa29.65■■■□□ 2.34
PVT1-219ENST00000523427 NRIP1P48552 1158 aa29.65■■■□□ 2.34
PVT1-219ENST00000523427 NFX1Q12986 1120 aaKnown RBP29.65■■■□□ 2.34
PVT1-219ENST00000523427 PLCB4Q15147 1175 aa29.65■■■□□ 2.34
PVT1-219ENST00000523427 P2RX5Q93086 422 aa29.65■■■□□ 2.34
PVT1-219ENST00000523427 TMEM87BQ96K49 555 aa29.65■■■□□ 2.34
PVT1-219ENST00000523427 SDF4Q9BRK5 362 aa29.65■■■□□ 2.34
PVT1-219ENST00000523427 CELF4Q9BZC1 486 aaKnown RBP29.65■■■□□ 2.34
PVT1-219ENST00000523427 SLC12A7Q9Y666 1083 aa29.65■■■□□ 2.34
PVT1-219ENST00000523427 MAFGO15525 162 aa29.64■■■□□ 2.34
PVT1-219ENST00000523427 ACTR2P61160 394 aa29.64■■■□□ 2.34
PVT1-219ENST00000523427 SPOUT1Q5T280 376 aaKnown RBP29.64■■■□□ 2.34
PVT1-219ENST00000523427 MICAL1Q8TDZ2 1067 aa29.64■■■□□ 2.34
PVT1-219ENST00000523427 MXRA8Q9BRK3 442 aa29.64■■■□□ 2.34
PVT1-219ENST00000523427 PCDHA2Q9Y5H9 948 aa29.64■■■□□ 2.34
PVT1-219ENST00000523427 RPLP2P05387 115 aaKnown RBP29.63■■■□□ 2.33
PVT1-219ENST00000523427 CALM1P0DP23 149 aa29.63■■■□□ 2.33
PVT1-219ENST00000523427 CALM2P0DP24 149 aa29.63■■■□□ 2.33
PVT1-219ENST00000523427 CALM3P0DP25 149 aa29.63■■■□□ 2.33
PVT1-219ENST00000523427 ARP10275 920 aa29.63■■■□□ 2.33
PVT1-219ENST00000523427 STAT5BP51692 787 aa29.63■■■□□ 2.33
PVT1-219ENST00000523427 KRT76Q01546 638 aa29.63■■■□□ 2.33
PVT1-219ENST00000523427 HERC4Q5GLZ8 1057 aaPredicted RBP29.63■■■□□ 2.33
PVT1-219ENST00000523427 MICU3Q86XE3 530 aa29.63■■■□□ 2.33
PVT1-219ENST00000523427 TNPO1Q92973 898 aaKnown RBP29.63■■■□□ 2.33
PVT1-219ENST00000523427 MFSD14AQ96MC6 490 aa29.63■■■□□ 2.33
PVT1-219ENST00000523427 TMTC3Q6ZXV5 915 aa29.62■■■□□ 2.33
PVT1-219ENST00000523427 CRIPAKQ8N1N5 446 aa29.62■■■□□ 2.33
PVT1-219ENST00000523427 FANCBQ8NB91 859 aa29.62■■■□□ 2.33
PVT1-219ENST00000523427 MSLNLQ96KJ4 702 aa29.62■■■□□ 2.33
PVT1-219ENST00000523427 TMX1Q9H3N1 280 aa29.62■■■□□ 2.33
PVT1-219ENST00000523427 CLEC1BQ9P126 229 aa29.62■■■□□ 2.33
PVT1-219ENST00000523427 BARX2Q9UMQ3 279 aaPredicted RBP29.62■■■□□ 2.33
PVT1-219ENST00000523427 SQORQ9Y6N5 450 aa29.62■■■□□ 2.33
PVT1-219ENST00000523427 IGSF9BQ9UPX0 1349 aa29.62■■■□□ 2.33
PVT1-219ENST00000523427 DDX39AO00148 427 aaKnown RBP29.61■■■□□ 2.33
PVT1-219ENST00000523427 NAALADL2Q58DX5 795 aa29.61■■■□□ 2.33
PVT1-219ENST00000523427 EFHBQ8N7U6 833 aa29.61■■■□□ 2.33
PVT1-219ENST00000523427 MTA3Q9BTC8 594 aa29.61■■■□□ 2.33
PVT1-219ENST00000523427 SLC27A2O14975 620 aa29.6■■■□□ 2.33
PVT1-219ENST00000523427 PER2O15055 1255 aa29.6■■■□□ 2.33
PVT1-219ENST00000523427 LIFRP42702 1097 aa29.6■■■□□ 2.33
PVT1-219ENST00000523427 NAPAP54920 295 aa29.6■■■□□ 2.33
PVT1-219ENST00000523427 MTHFD1LQ6UB35 978 aa29.6■■■□□ 2.33
PVT1-219ENST00000523427 TLE6Q9H808 572 aa29.6■■■□□ 2.33
PVT1-219ENST00000523427 PCDHB7Q9Y5E2 793 aa29.6■■■□□ 2.33
PVT1-219ENST00000523427 BACH1O14867 736 aa29.59■■■□□ 2.33
PVT1-219ENST00000523427 KLRC1P26715 233 aa29.59■■■□□ 2.33
PVT1-219ENST00000523427 ITGB3BPQ13352 177 aaPredicted RBP29.59■■■□□ 2.33
PVT1-219ENST00000523427 WWC2Q6AWC2 1192 aa29.59■■■□□ 2.33
PVT1-219ENST00000523427 PLPPR4Q7Z2D5 763 aa29.59■■■□□ 2.33
PVT1-219ENST00000523427 EDAQ92838 391 aa29.59■■■□□ 2.33
PVT1-219ENST00000523427 PPP1R16BQ96T49 567 aa29.59■■■□□ 2.33
PVT1-219ENST00000523427 SMIM35A0A1B0GVV1 85 aa29.58■■■□□ 2.33
PVT1-219ENST00000523427 TRIOO75962 3097 aa29.58■■■□□ 2.33
PVT1-219ENST00000523427 EYA4O95677 639 aa29.58■■■□□ 2.33
PVT1-219ENST00000523427 RBM10P98175 930 aaKnown RBP29.58■■■□□ 2.33
PVT1-219ENST00000523427 KCNH6Q9H252 994 aa29.58■■■□□ 2.33
PVT1-219ENST00000523427 CDHR5Q9HBB8 845 aa29.58■■■□□ 2.33
PVT1-219ENST00000523427 AGO4Q9HCK5 861 aaKnown RBP29.58■■■□□ 2.33
PVT1-219ENST00000523427 NOC2LQ9Y3T9 749 aaKnown RBP29.58■■■□□ 2.33
PVT1-219ENST00000523427 NFASCO94856 1347 aa29.57■■■□□ 2.32
PVT1-219ENST00000523427 TBKBP1A7MCY6 615 aa29.57■■■□□ 2.32
PVT1-219ENST00000523427 MGEA5O60502 916 aa29.57■■■□□ 2.32
PVT1-219ENST00000523427 ZNF76P36508 570 aa29.57■■■□□ 2.32
PVT1-219ENST00000523427 SARSP49591 514 aaKnown RBP29.57■■■□□ 2.32
PVT1-219ENST00000523427 SYNE3Q6ZMZ3 975 aa29.57■■■□□ 2.32
PVT1-219ENST00000523427 NME8Q8N427 588 aa29.57■■■□□ 2.32
PVT1-219ENST00000523427 LSG1Q9H089 658 aaKnown RBP29.57■■■□□ 2.32
PVT1-219ENST00000523427 TMEM260Q9NX78 707 aa29.57■■■□□ 2.32
PVT1-219ENST00000523427 USP15Q9Y4E8 981 aaPredicted RBP29.57■■■□□ 2.32
PVT1-219ENST00000523427 PCDHB12Q9Y5F1 795 aa29.57■■■□□ 2.32
PVT1-219ENST00000523427 TECTAO75443 2155 aa29.57■■■□□ 2.32
PVT1-219ENST00000523427 LOXHD1Q8IVV2 1947 aa29.56■■■□□ 2.32
PVT1-219ENST00000523427 DENND3A2RUS2 1198 aa29.56■■■□□ 2.32
PVT1-219ENST00000523427 RPS6KA5O75582 802 aa29.56■■■□□ 2.32
PVT1-219ENST00000523427 GLP2RO95838 553 aa29.56■■■□□ 2.32
PVT1-219ENST00000523427 IRX6P78412 446 aaPredicted RBP29.56■■■□□ 2.32
PVT1-219ENST00000523427 CEP55Q53EZ4 464 aa29.56■■■□□ 2.32
PVT1-219ENST00000523427 FAM102BQ5T8I3 360 aa29.56■■■□□ 2.32
PVT1-219ENST00000523427 CREB3L3Q68CJ9 461 aa29.56■■■□□ 2.32
PVT1-219ENST00000523427 TYW1BQ6NUM6 668 aa29.56■■■□□ 2.32
PVT1-219ENST00000523427 TRMT1LQ7Z2T5 733 aaKnown RBP29.56■■■□□ 2.32
PVT1-219ENST00000523427 SMRP1Q8NCR6 262 aa29.56■■■□□ 2.32
PVT1-219ENST00000523427 PBXIP1Q96AQ6 731 aa29.56■■■□□ 2.32
PVT1-219ENST00000523427 RPGRIP1Q96KN7 1286 aa29.56■■■□□ 2.32
PVT1-219ENST00000523427 ADAM2Q99965 735 aa29.56■■■□□ 2.32
PVT1-219ENST00000523427 ANO3Q9BYT9 981 aa29.56■■■□□ 2.32
PVT1-219ENST00000523427 HCSTQ9UBK5 93 aa29.56■■■□□ 2.32
PVT1-219ENST00000523427 KIAA1671Q9BY89 1806 aa29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms